BLASTX nr result

ID: Rheum21_contig00022904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00022904
         (258 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006482067.1| PREDICTED: transcription factor bHLH106-like...    62   6e-08
ref|XP_006430538.1| hypothetical protein CICLE_v10012626mg [Citr...    61   1e-07
ref|XP_002322615.2| hypothetical protein POPTR_0016s03460g [Popu...    58   1e-06
ref|XP_002307967.2| hypothetical protein POPTR_0006s03550g [Popu...    57   3e-06
gb|EMJ03776.1| hypothetical protein PRUPE_ppa011532mg [Prunus pe...    57   3e-06
gb|EOY08809.1| Basic helix-loop-helix DNA-binding superfamily pr...    56   4e-06
ref|XP_002517323.1| DNA binding protein, putative [Ricinus commu...    56   6e-06
ref|NP_181646.1| transcription factor bHLH106 [Arabidopsis thali...    55   7e-06
gb|AAL69455.1| At2g41130/T3K9.10 [Arabidopsis thaliana]                55   7e-06

>ref|XP_006482067.1| PREDICTED: transcription factor bHLH106-like [Citrus sinensis]
          Length = 238

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = -2

Query: 107 SGLTETAPDEKTLAALRNHKEAEKRRRERINSHLD 3
           SGLTET P+++ LAAL+NHKEAEKRRRERINSHL+
Sbjct: 50  SGLTETTPEDRALAALKNHKEAEKRRRERINSHLN 84


>ref|XP_006430538.1| hypothetical protein CICLE_v10012626mg [Citrus clementina]
           gi|557532595|gb|ESR43778.1| hypothetical protein
           CICLE_v10012626mg [Citrus clementina]
          Length = 237

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = -2

Query: 107 SGLTETAPDEKTLAALRNHKEAEKRRRERINSHLD 3
           SG+TET P+++ LAAL+NHKEAEKRRRERINSHL+
Sbjct: 50  SGVTETTPEDRALAALKNHKEAEKRRRERINSHLN 84


>ref|XP_002322615.2| hypothetical protein POPTR_0016s03460g [Populus trichocarpa]
           gi|118482181|gb|ABK93020.1| unknown [Populus
           trichocarpa] gi|550320736|gb|EEF04376.2| hypothetical
           protein POPTR_0016s03460g [Populus trichocarpa]
          Length = 241

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -2

Query: 122 FESASSGLTETAPDEKTLAALRNHKEAEKRRRERINSHLD 3
           ++  SS +T+  P ++ LAAL+NHKEAEKRRRERINSHLD
Sbjct: 50  YQFESSVITDMTPQDRALAALKNHKEAEKRRRERINSHLD 89


>ref|XP_002307967.2| hypothetical protein POPTR_0006s03550g [Populus trichocarpa]
           gi|550335378|gb|EEE91490.2| hypothetical protein
           POPTR_0006s03550g [Populus trichocarpa]
          Length = 240

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -2

Query: 107 SGLTETAPDEKTLAALRNHKEAEKRRRERINSHLD 3
           S +T+  P+++ LAAL+NHKEAEKRRRERINSHLD
Sbjct: 54  SVITDMTPEDRALAALKNHKEAEKRRRERINSHLD 88


>gb|EMJ03776.1| hypothetical protein PRUPE_ppa011532mg [Prunus persica]
          Length = 207

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -2

Query: 95  ETAPDEKTLAALRNHKEAEKRRRERINSHLD 3
           ET+P ++ LAAL+NHKEAEKRRRERINSHLD
Sbjct: 25  ETSPQDRALAALKNHKEAEKRRRERINSHLD 55


>gb|EOY08809.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
           cacao]
          Length = 294

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = -2

Query: 98  TETAPDEKTLAALRNHKEAEKRRRERINSHLD 3
           TET P ++ LAAL+NHKEAEKRRRERINSHL+
Sbjct: 112 TETTPQDRALAALKNHKEAEKRRRERINSHLN 143


>ref|XP_002517323.1| DNA binding protein, putative [Ricinus communis]
           gi|223543586|gb|EEF45116.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 237

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -2

Query: 107 SGLTETAPDEKTLAALRNHKEAEKRRRERINSHLD 3
           S +T+  P ++ LAAL+NHKEAEKRRRERINSHLD
Sbjct: 51  SVITDMTPQDRALAALKNHKEAEKRRRERINSHLD 85


>ref|NP_181646.1| transcription factor bHLH106 [Arabidopsis thaliana]
           gi|75278862|sp|O80674.1|BH106_ARATH RecName:
           Full=Transcription factor bHLH106; AltName: Full=Basic
           helix-loop-helix protein 106; Short=AtbHLH106;
           Short=bHLH 106; AltName: Full=Transcription factor EN
           56; AltName: Full=bHLH transcription factor bHLH106
           gi|3402704|gb|AAD11998.1| unknown protein [Arabidopsis
           thaliana] gi|26453118|dbj|BAC43635.1| putative bHLH
           transcription factor bHLH106 [Arabidopsis thaliana]
           gi|330254841|gb|AEC09935.1| transcription factor bHLH106
           [Arabidopsis thaliana]
          Length = 253

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -2

Query: 113 ASSGLTETAPDEKTLAALRNHKEAEKRRRERINSHLD 3
           A SG+ ET   ++ LAALRNHKEAE+RRRERINSHL+
Sbjct: 51  AISGIGETMAQDRALAALRNHKEAERRRRERINSHLN 87


>gb|AAL69455.1| At2g41130/T3K9.10 [Arabidopsis thaliana]
          Length = 245

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -2

Query: 113 ASSGLTETAPDEKTLAALRNHKEAEKRRRERINSHLD 3
           A SG+ ET   ++ LAALRNHKEAE+RRRERINSHL+
Sbjct: 43  AISGIGETMAQDRALAALRNHKEAERRRRERINSHLN 79


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