BLASTX nr result
ID: Rheum21_contig00022757
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00022757
(252 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006373253.1| Sister chromatid cohesion 1 protein 2 [Popul... 78 1e-12
ref|XP_002331697.1| predicted protein [Populus trichocarpa] 78 1e-12
ref|XP_006470017.1| PREDICTED: sister chromatid cohesion 1 prote... 75 1e-11
ref|XP_006447122.1| hypothetical protein CICLE_v10014314mg [Citr... 75 1e-11
ref|XP_006447121.1| hypothetical protein CICLE_v10014314mg [Citr... 75 1e-11
emb|CBI40063.3| unnamed protein product [Vitis vinifera] 75 1e-11
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote... 75 1e-11
ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 prote... 73 3e-11
gb|EXC31357.1| Sister chromatid cohesion 1 protein 2 [Morus nota... 73 4e-11
ref|XP_004305921.1| PREDICTED: sister chromatid cohesion 1 prote... 71 1e-10
ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ... 70 2e-10
gb|EOY16862.1| Rad21/Rec8-like family protein isoform 3 [Theobro... 59 7e-07
gb|EOY16861.1| Rad21/Rec8-like family protein isoform 2 [Theobro... 59 7e-07
gb|EOY16860.1| Rad21/Rec8-like family protein isoform 1 [Theobro... 59 7e-07
ref|XP_004305922.1| PREDICTED: sister chromatid cohesion 1 prote... 59 7e-07
ref|XP_006405422.1| hypothetical protein EUTSA_v10027644mg [Eutr... 59 9e-07
ref|NP_568586.2| sister chromatid cohesion 1 protein 2 [Arabidop... 56 6e-06
gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidops... 56 6e-06
dbj|BAB11346.1| unnamed protein product [Arabidopsis thaliana] 56 6e-06
ref|NP_001119344.1| sister chromatid cohesion 1 protein 2 [Arabi... 56 6e-06
>ref|XP_006373253.1| Sister chromatid cohesion 1 protein 2 [Populus trichocarpa]
gi|550319959|gb|ERP51050.1| Sister chromatid cohesion 1
protein 2 [Populus trichocarpa]
Length = 770
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = -2
Query: 245 LPLKVETTPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRN 66
L +K++ TP K DV + E + + TPA KE R KRKC +DD+ V N +K
Sbjct: 350 LYIKLDATPQSKFKDVSGANTPEFMVISTPAAKEHARALRKRKCFFDDVVVFPNNVIKEC 409
Query: 65 IGDTSDLVRKRRRVPHTSLAV 3
I +T DLV KRR++PHT+ AV
Sbjct: 410 IENTGDLVSKRRKLPHTAFAV 430
>ref|XP_002331697.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = -2
Query: 245 LPLKVETTPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRN 66
L +K++ TP K DV + E + + TPA KE R KRKC +DD+ V N +K
Sbjct: 350 LYIKLDATPQSKFKDVSGANTPEFMVISTPAAKEHARALRKRKCFFDDVVVFPNNVIKEC 409
Query: 65 IGDTSDLVRKRRRVPHTSLAV 3
I +T DLV KRR++PHT+ AV
Sbjct: 410 IENTGDLVSKRRKLPHTAFAV 430
>ref|XP_006470017.1| PREDICTED: sister chromatid cohesion 1 protein 2-like isoform X2
[Citrus sinensis]
Length = 775
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = -2
Query: 251 EKLPLKVETTPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLK 72
+ L + V+ TP K D + E + V+TPA KE R + KRKC +DD+TV N ++
Sbjct: 370 DPLSVTVDATPQSKFLDASGATTPEFMVVQTPATKECARISRKRKCCFDDVTVFPNDVMR 429
Query: 71 RNIGDTSDLVRKRRRVPHTSLA 6
+ I D SDLV KRR+VP T LA
Sbjct: 430 QCIQDASDLVSKRRKVPRTVLA 451
>ref|XP_006447122.1| hypothetical protein CICLE_v10014314mg [Citrus clementina]
gi|568831532|ref|XP_006470016.1| PREDICTED: sister
chromatid cohesion 1 protein 2-like isoform X1 [Citrus
sinensis] gi|557549733|gb|ESR60362.1| hypothetical
protein CICLE_v10014314mg [Citrus clementina]
Length = 802
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = -2
Query: 251 EKLPLKVETTPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLK 72
+ L + V+ TP K D + E + V+TPA KE R + KRKC +DD+TV N ++
Sbjct: 370 DPLSVTVDATPQSKFLDASGATTPEFMVVQTPATKECARISRKRKCCFDDVTVFPNDVMR 429
Query: 71 RNIGDTSDLVRKRRRVPHTSLA 6
+ I D SDLV KRR+VP T LA
Sbjct: 430 QCIQDASDLVSKRRKVPRTVLA 451
>ref|XP_006447121.1| hypothetical protein CICLE_v10014314mg [Citrus clementina]
gi|557549732|gb|ESR60361.1| hypothetical protein
CICLE_v10014314mg [Citrus clementina]
Length = 724
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = -2
Query: 251 EKLPLKVETTPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLK 72
+ L + V+ TP K D + E + V+TPA KE R + KRKC +DD+TV N ++
Sbjct: 370 DPLSVTVDATPQSKFLDASGATTPEFMVVQTPATKECARISRKRKCCFDDVTVFPNDVMR 429
Query: 71 RNIGDTSDLVRKRRRVPHTSLA 6
+ I D SDLV KRR+VP T LA
Sbjct: 430 QCIQDASDLVSKRRKVPRTVLA 451
>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = -2
Query: 233 VETTPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDT 54
++ TP+ PD + E + V TP KE R KRKC++D+ VLS++ LK++I +
Sbjct: 324 LDATPESNLPDASGSTTPEFIIVHTPTKKEHARIPRKRKCLFDEKIVLSSEFLKKSIQSS 383
Query: 53 SDLVRKRRRVPHTS 12
SDL+RKRR+VPHT+
Sbjct: 384 SDLIRKRRKVPHTA 397
>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
vinifera]
Length = 756
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = -2
Query: 233 VETTPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDT 54
++ TP+ PD + E + V TP KE R KRKC++D+ VLS++ LK++I +
Sbjct: 459 LDATPESNLPDASGSTTPEFIIVHTPTKKEHARIPRKRKCLFDEKIVLSSEFLKKSIQSS 518
Query: 53 SDLVRKRRRVPHTS 12
SDL+RKRR+VPHT+
Sbjct: 519 SDLIRKRRKVPHTA 532
>ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Solanum
tuberosum]
Length = 627
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = -2
Query: 209 APDVKAPGST--ELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDTSDLVRK 36
+P+ K GST + ++VRTPA KER R + KRKCI+D+ V+ N+ K IGD +DLV K
Sbjct: 363 SPETKISGSTSPDFISVRTPAKKERTRISRKRKCIFDESIVIPNEVFKHWIGDANDLVCK 422
Query: 35 RRRVPHTS 12
RR+ PH+S
Sbjct: 423 RRKAPHSS 430
>gb|EXC31357.1| Sister chromatid cohesion 1 protein 2 [Morus notabilis]
Length = 900
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 23/106 (21%)
Frame = -2
Query: 251 EKLPLKVETTPDLKAPD-----------VKAPGSTE------------LLAVRTPANKER 141
E L ++++ TP++K PD + P + E +++ TPA KER
Sbjct: 479 EPLFIELDRTPEIKVPDASGASTLQYMGISTPATKERSLVNARAATPKFISIPTPATKER 538
Query: 140 VRKTNKRKCIYDDITVLSNQTLKRNIGDTSDLVRKRRRVPHTSLAV 3
+ + KRKCI+DD+ VL N+ LK +I D SDLV KRR+V T+LAV
Sbjct: 539 AQISRKRKCIFDDVIVLPNKVLKTSIYDASDLVSKRRKVAQTALAV 584
>ref|XP_004305921.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Fragaria
vesca subsp. vesca]
Length = 772
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/83 (39%), Positives = 55/83 (66%)
Frame = -2
Query: 251 EKLPLKVETTPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLK 72
E + ++ + +PD K PD + +L+AV PA+K + + KRKC++DDI +L ++ ++
Sbjct: 417 ESVSVEYDGSPDAKQPDALGVTTPKLVAVPRPASKRSAQISRKRKCVFDDIVMLPSEVIR 476
Query: 71 RNIGDTSDLVRKRRRVPHTSLAV 3
++I D SDLV KRR+VP + AV
Sbjct: 477 QSIHDASDLVAKRRKVPKNAHAV 499
>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
protein, putative [Ricinus communis]
Length = 781
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = -2
Query: 245 LPLKVETTPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRN 66
L + ++TTP + P+ + E+ + TPA KE R KRKC++DD V N +K+
Sbjct: 407 LSVTLDTTPRPRFPNASGAMTPEISVIPTPAAKEGARVPRKRKCVFDDTIVFPNNVIKQC 466
Query: 65 IGDTSDLVRKRRRVPHTSL 9
I D+SDLV KR++ PHT+L
Sbjct: 467 IEDSSDLVSKRKKAPHTAL 485
>gb|EOY16862.1| Rad21/Rec8-like family protein isoform 3 [Theobroma cacao]
Length = 797
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = -2
Query: 224 TPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDTSDL 45
TP K + + +RTP KER R + KRKC++DD+ V N +++ I D SDL
Sbjct: 534 TPQSKLRGASGATTPHFMPIRTPVTKERARLSRKRKCVFDDMIVFPNDLMRQWIKDASDL 593
Query: 44 VRKRRR 27
V KRR+
Sbjct: 594 VSKRRK 599
>gb|EOY16861.1| Rad21/Rec8-like family protein isoform 2 [Theobroma cacao]
Length = 856
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = -2
Query: 224 TPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDTSDL 45
TP K + + +RTP KER R + KRKC++DD+ V N +++ I D SDL
Sbjct: 534 TPQSKLRGASGATTPHFMPIRTPVTKERARLSRKRKCVFDDMIVFPNDLMRQWIKDASDL 593
Query: 44 VRKRRR 27
V KRR+
Sbjct: 594 VSKRRK 599
>gb|EOY16860.1| Rad21/Rec8-like family protein isoform 1 [Theobroma cacao]
Length = 887
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = -2
Query: 224 TPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDTSDL 45
TP K + + +RTP KER R + KRKC++DD+ V N +++ I D SDL
Sbjct: 534 TPQSKLRGASGATTPHFMPIRTPVTKERARLSRKRKCVFDDMIVFPNDLMRQWIKDASDL 593
Query: 44 VRKRRR 27
V KRR+
Sbjct: 594 VSKRRK 599
>ref|XP_004305922.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Fragaria
vesca subsp. vesca]
Length = 560
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = -2
Query: 251 EKLPLKVETTPDLKAPDVKAPGSTELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLK 72
+ + ++ DL+A V P ++ R+ + KR+C D+ITVL N +K
Sbjct: 398 DNMNCQINARKDLEALGVTTPKLRRVIPTPAIRKAARISRKRKRRCRIDEITVLPNAVIK 457
Query: 71 RNIGDTSDLVRKRRRVPHTSL 9
++I D SDLV KRR+VP T+L
Sbjct: 458 QSINDASDLVSKRRKVPETAL 478
>ref|XP_006405422.1| hypothetical protein EUTSA_v10027644mg [Eutrema salsugineum]
gi|557106560|gb|ESQ46875.1| hypothetical protein
EUTSA_v10027644mg [Eutrema salsugineum]
Length = 816
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = -2
Query: 185 STELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDTSDLVRKRRRVPHT 15
S + + TPA KE R + KRKC+ DD ++ N+ +K+ I D S LV KRR+VPHT
Sbjct: 440 SHQFSIIPTPAAKESARVSRKRKCVIDDEVIIPNKVMKKMIEDPSTLVSKRRKVPHT 496
>ref|NP_568586.2| sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana]
gi|30913286|sp|Q9FQ20.2|SCC12_ARATH RecName: Full=Sister
chromatid cohesion 1 protein 2; AltName: Full=SCC1
homolog 2; Short=AtRAD21-1
gi|18157643|gb|AAL62057.1|AF400126_1 RAD21-1 variant 1
[Arabidopsis thaliana] gi|332007220|gb|AED94603.1|
cohesion family protein SYN2 (SYN2) [Arabidopsis
thaliana]
Length = 810
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -2
Query: 185 STELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDTSDLVRKRRRVPHT 15
S + + TPA KE R + KRKC+ DD ++ N+ +K I D+S L+ KRR VPHT
Sbjct: 441 SPQFSIIPTPAAKESSRVSRKRKCLIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHT 497
>gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidopsis thaliana]
Length = 809
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -2
Query: 185 STELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDTSDLVRKRRRVPHT 15
S + + TPA KE R + KRKC+ DD ++ N+ +K I D+S L+ KRR VPHT
Sbjct: 441 SPQFSIIPTPAAKESSRVSRKRKCLIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHT 497
>dbj|BAB11346.1| unnamed protein product [Arabidopsis thaliana]
Length = 901
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -2
Query: 185 STELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDTSDLVRKRRRVPHT 15
S + + TPA KE R + KRKC+ DD ++ N+ +K I D+S L+ KRR VPHT
Sbjct: 467 SPQFSIIPTPAAKESSRVSRKRKCLIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHT 523
>ref|NP_001119344.1| sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana]
gi|332007221|gb|AED94604.1| cohesion family protein SYN2
(SYN2) [Arabidopsis thaliana]
Length = 678
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -2
Query: 185 STELLAVRTPANKERVRKTNKRKCIYDDITVLSNQTLKRNIGDTSDLVRKRRRVPHT 15
S + + TPA KE R + KRKC+ DD ++ N+ +K I D+S L+ KRR VPHT
Sbjct: 309 SPQFSIIPTPAAKESSRVSRKRKCLIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHT 365