BLASTX nr result

ID: Rheum21_contig00022751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00022751
         (598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]    76   6e-12
gb|EXB60477.1| hypothetical protein L484_014932 [Morus notabilis]      71   3e-10
ref|XP_004308688.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
gb|EMJ26418.1| hypothetical protein PRUPE_ppa001949mg [Prunus pe...    56   6e-06

>emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
 Frame = +2

Query: 170 PCCPIHYTCFLGTSPSKPNHLQPSAVKFDTATAQNIGLRD-PELSNHASPPQSRLPRKSQ 346
           P  P   TCFL  SP   N       KF  +T + IG +    +SNH  P Q+ LP    
Sbjct: 15  PSSPFPDTCFLHLSPHNRNFFPLPKSKFRVSTPRIIGFKHYSTVSNHIHP-QTLLP---- 69

Query: 347 DFRSFGFKVFVRGEYEIGEPLYLINRIGRKASVSVFECRQVHARLVKVGAIRVDDVVGHK 526
              SF   +      EI + + L+NR       ++ E RQ+HAR+VK+ A++    +G+K
Sbjct: 70  ---SFVDTLTNSSPTEISDSISLLNRCS-----TLSEFRQIHARVVKLNALKWKSSIGNK 121

Query: 527 LVKAYLRNDESLDDARKVFDEIP 595
           LV  Y +N  SL+DARK+ DEIP
Sbjct: 122 LVVLYCKNQWSLEDARKLLDEIP 144


>gb|EXB60477.1| hypothetical protein L484_014932 [Morus notabilis]
          Length = 730

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 37/94 (39%), Positives = 57/94 (60%)
 Frame = +2

Query: 317 PQSRLPRKSQDFRSFGFKVFVRGEYEIGEPLYLINRIGRKASVSVFECRQVHARLVKVGA 496
           P++++    +  R+F F    +  +E+G  L L+N      S  V +CRQ+HA  VK+ A
Sbjct: 58  PRAQVSLSPEKTRNFSFYTSTQSIFEVGHCLSLLN------SDYVCDCRQIHAFAVKLNA 111

Query: 497 IRVDDVVGHKLVKAYLRNDESLDDARKVFDEIPE 598
             VD ++G+KL   YL+  ESL+ ARK+FDEIP+
Sbjct: 112 FEVDSLIGNKLAVLYLKKMESLESARKMFDEIPK 145


>ref|XP_004308688.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Fragaria vesca subsp. vesca]
          Length = 544

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 45/134 (33%), Positives = 64/134 (47%)
 Frame = +2

Query: 197 FLGTSPSKPNHLQPSAVKFDTATAQNIGLRDPELSNHASPPQSRLPRKSQDFRSFGFKVF 376
           F   SPS+P  +     KF+   +  I    P L N   P  + + +K+ DF +      
Sbjct: 15  FTDPSPSQPP-INVHTPKFNFRAS--IDTNTPTLPN-PQPHLAFIAKKASDFSN------ 64

Query: 377 VRGEYEIGEPLYLINRIGRKASVSVFECRQVHARLVKVGAIRVDDVVGHKLVKAYLRNDE 556
               Y       + + I    S  V +CRQVHA  +K  A+ V+  VG+KL   Y RN E
Sbjct: 65  ---SYRAQPTSEVSHCISLLKSNHVADCRQVHALALKSNALEVNSWVGNKLAMLYCRNYE 121

Query: 557 SLDDARKVFDEIPE 598
            LD A+K+FDE+PE
Sbjct: 122 LLDYAQKLFDEMPE 135


>gb|EMJ26418.1| hypothetical protein PRUPE_ppa001949mg [Prunus persica]
          Length = 737

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 44/145 (30%), Positives = 66/145 (45%)
 Frame = +2

Query: 164 LLPCCPIHYTCFLGTSPSKPNHLQPSAVKFDTATAQNIGLRDPELSNHASPPQSRLPRKS 343
           LLP  P+     L     KPN+       F  +     G     LSN A+P Q+ +   S
Sbjct: 8   LLPGNPVLIESSLS---QKPNNSHKPKFIFQASIDTTNGSTGTTLSNQANP-QTHVSFAS 63

Query: 344 QDFRSFGFKVFVRGEYEIGEPLYLINRIGRKASVSVFECRQVHARLVKVGAIRVDDVVGH 523
           +               EIG  + L+       S  V +CRQ+HA+ +K+ A   +  +G+
Sbjct: 64  KKTTKLSNNPRAGTNSEIGHCISLLK------SNPVCDCRQIHAQALKLNAFEENGWIGN 117

Query: 524 KLVKAYLRNDESLDDARKVFDEIPE 598
           KL   Y +N E LD ARK+F++IP+
Sbjct: 118 KLAMLYSKNKEFLDYARKLFNDIPK 142


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