BLASTX nr result
ID: Rheum21_contig00022644
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00022644
(236 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP bindin... 118 7e-25
gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP bindin... 118 7e-25
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 117 1e-24
emb|CBI25341.3| unnamed protein product [Vitis vinifera] 117 1e-24
emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera] 117 1e-24
ref|XP_006435949.1| hypothetical protein CICLE_v10030489mg [Citr... 116 4e-24
ref|XP_006435948.1| hypothetical protein CICLE_v10030489mg [Citr... 116 4e-24
gb|EMJ21511.1| hypothetical protein PRUPE_ppa000129mg [Prunus pe... 115 5e-24
ref|XP_006575381.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 115 8e-24
ref|XP_006575379.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 115 8e-24
gb|ESW13318.1| hypothetical protein PHAVU_008G186300g [Phaseolus... 114 1e-23
ref|XP_004235225.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 114 1e-23
ref|XP_004490508.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 113 2e-23
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t... 113 2e-23
ref|XP_006371305.1| hypothetical protein POPTR_0019s08910g [Popu... 111 9e-23
ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis ... 111 9e-23
ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 d... 111 9e-23
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu... 111 9e-23
ref|XP_006293440.1| hypothetical protein CARUB_v10022506mg [Caps... 111 1e-22
ref|XP_006411344.1| hypothetical protein EUTSA_v10016132mg [Eutr... 110 1e-22
>gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
binding isoform 2 [Theobroma cacao]
Length = 1666
Score = 118 bits (296), Expect = 7e-25
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAG-CFSENVSAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL C+F+HQ+ +SE G C EKI L+R+K ERVEC+CGAVSE
Sbjct: 364 DEMGLGKTVELLACIFAHQKPSSEGGVCKDTEAEVTMDEKISLRRLKRERVECICGAVSE 423
Query: 57 SVKYKGLWVQCDICDAWQH 1
+ KYKGLWVQCDICDAWQH
Sbjct: 424 NRKYKGLWVQCDICDAWQH 442
>gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
binding isoform 1 [Theobroma cacao]
Length = 1682
Score = 118 bits (296), Expect = 7e-25
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAG-CFSENVSAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL C+F+HQ+ +SE G C EKI L+R+K ERVEC+CGAVSE
Sbjct: 364 DEMGLGKTVELLACIFAHQKPSSEGGVCKDTEAEVTMDEKISLRRLKRERVECICGAVSE 423
Query: 57 SVKYKGLWVQCDICDAWQH 1
+ KYKGLWVQCDICDAWQH
Sbjct: 424 NRKYKGLWVQCDICDAWQH 442
>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
Length = 1704
Score = 117 bits (294), Expect = 1e-24
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSEN-VSAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL C+F+H++ ASE+G N + A +KI LKR+K + VEC+CGAVSE
Sbjct: 356 DEMGLGKTVELLACIFAHRKPASESGILLNNALQAAQGQKINLKRLKRDHVECICGAVSE 415
Query: 57 SVKYKGLWVQCDICDAWQH 1
S +YKGLWVQCD+CDAWQH
Sbjct: 416 SPRYKGLWVQCDVCDAWQH 434
>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
Length = 1717
Score = 117 bits (294), Expect = 1e-24
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSEN-VSAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL C+F+H++ ASE+G N + A +KI LKR+K + VEC+CGAVSE
Sbjct: 416 DEMGLGKTVELLACIFAHRKPASESGILLNNALQAAQGQKINLKRLKRDHVECICGAVSE 475
Query: 57 SVKYKGLWVQCDICDAWQH 1
S +YKGLWVQCD+CDAWQH
Sbjct: 476 SPRYKGLWVQCDVCDAWQH 494
>emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera]
Length = 1111
Score = 117 bits (294), Expect = 1e-24
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSEN-VSAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL C+F+H++ ASE+G N + A +KI LKR+K + VEC+CGAVSE
Sbjct: 358 DEMGLGKTVELLACIFAHRKPASESGILLNNALQAAQGQKINLKRLKRDHVECICGAVSE 417
Query: 57 SVKYKGLWVQCDICDAWQH 1
S +YKGLWVQCD+CDAWQH
Sbjct: 418 SPRYKGLWVQCDVCDAWQH 436
>ref|XP_006435949.1| hypothetical protein CICLE_v10030489mg [Citrus clementina]
gi|568865570|ref|XP_006486147.1| PREDICTED: E3
ubiquitin-protein ligase SHPRH-like isoform X3 [Citrus
sinensis] gi|557538145|gb|ESR49189.1| hypothetical
protein CICLE_v10030489mg [Citrus clementina]
Length = 1236
Score = 116 bits (290), Expect = 4e-24
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSEN-VSAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL C+F+H++ AS+ F + V + +K+ L+R+K ERVEC+CGAVSE
Sbjct: 364 DEMGLGKTVELLACIFAHRKPASDDSIFIDTAVQVTDDQKVNLRRLKRERVECICGAVSE 423
Query: 57 SVKYKGLWVQCDICDAWQH 1
S KYKGLWVQCDICDAWQH
Sbjct: 424 SRKYKGLWVQCDICDAWQH 442
>ref|XP_006435948.1| hypothetical protein CICLE_v10030489mg [Citrus clementina]
gi|568865566|ref|XP_006486145.1| PREDICTED: E3
ubiquitin-protein ligase SHPRH-like isoform X1 [Citrus
sinensis] gi|568865568|ref|XP_006486146.1| PREDICTED: E3
ubiquitin-protein ligase SHPRH-like isoform X2 [Citrus
sinensis] gi|557538144|gb|ESR49188.1| hypothetical
protein CICLE_v10030489mg [Citrus clementina]
Length = 1685
Score = 116 bits (290), Expect = 4e-24
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSEN-VSAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL C+F+H++ AS+ F + V + +K+ L+R+K ERVEC+CGAVSE
Sbjct: 364 DEMGLGKTVELLACIFAHRKPASDDSIFIDTAVQVTDDQKVNLRRLKRERVECICGAVSE 423
Query: 57 SVKYKGLWVQCDICDAWQH 1
S KYKGLWVQCDICDAWQH
Sbjct: 424 SRKYKGLWVQCDICDAWQH 442
>gb|EMJ21511.1| hypothetical protein PRUPE_ppa000129mg [Prunus persica]
Length = 1710
Score = 115 bits (289), Expect = 5e-24
Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSENVSAGNHE-KIGLKRVKMERVECVCGAVSE 58
DEMG+GKTVELL C+F+H++SA E F+++ S + K+ LKR+K ERVEC+CGAVSE
Sbjct: 397 DEMGMGKTVELLACIFAHRKSADEDNMFADSESQATEDLKVNLKRLKRERVECICGAVSE 456
Query: 57 SVKYKGLWVQCDICDAWQH 1
+ YKGLWVQCD+CDAWQH
Sbjct: 457 NRSYKGLWVQCDVCDAWQH 475
>ref|XP_006575381.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X3
[Glycine max]
Length = 1503
Score = 115 bits (287), Expect = 8e-24
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSE-NVSAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL CVF+H+R AS + + A +K+ LKR+K ERVEC+CGAVSE
Sbjct: 366 DEMGLGKTVELLACVFAHRRQASGSDILIDLEPQANGDQKVTLKRLKRERVECICGAVSE 425
Query: 57 SVKYKGLWVQCDICDAWQH 1
S+KY+GLWVQCDICDAWQH
Sbjct: 426 SLKYEGLWVQCDICDAWQH 444
>ref|XP_006575379.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X1
[Glycine max] gi|571441227|ref|XP_006575380.1|
PREDICTED: E3 ubiquitin-protein ligase SHPRH-like
isoform X2 [Glycine max]
Length = 1671
Score = 115 bits (287), Expect = 8e-24
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSE-NVSAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL CVF+H+R AS + + A +K+ LKR+K ERVEC+CGAVSE
Sbjct: 366 DEMGLGKTVELLACVFAHRRQASGSDILIDLEPQANGDQKVTLKRLKRERVECICGAVSE 425
Query: 57 SVKYKGLWVQCDICDAWQH 1
S+KY+GLWVQCDICDAWQH
Sbjct: 426 SLKYEGLWVQCDICDAWQH 444
>gb|ESW13318.1| hypothetical protein PHAVU_008G186300g [Phaseolus vulgaris]
Length = 1669
Score = 114 bits (286), Expect = 1e-23
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGC-FSENVSAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL C+F+H+RSAS + F +K+ LKRVK +RVEC+CGAVSE
Sbjct: 363 DEMGLGKTVELLACIFTHRRSASGSDILFDLEPQINGDQKVTLKRVKRDRVECMCGAVSE 422
Query: 57 SVKYKGLWVQCDICDAWQH 1
S+KY+GLWVQCDICDAWQH
Sbjct: 423 SLKYEGLWVQCDICDAWQH 441
>ref|XP_004235225.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
SHPRH-like [Solanum lycopersicum]
Length = 1681
Score = 114 bits (286), Expect = 1e-23
Identities = 50/78 (64%), Positives = 61/78 (78%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSENVSAGNHEKIGLKRVKMERVECVCGAVSES 55
DEMGLGKTVELL C+F+HQ ++S G F+ +K LKR+K ERVEC+CG+VSES
Sbjct: 362 DEMGLGKTVELLACIFTHQVASSSIGNFTGEFLCDEGQKNSLKRLKRERVECICGSVSES 421
Query: 54 VKYKGLWVQCDICDAWQH 1
++YKGLWVQCD CDAWQH
Sbjct: 422 IRYKGLWVQCDACDAWQH 439
>ref|XP_004490508.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X1 [Cicer
arietinum] gi|502095669|ref|XP_004490509.1| PREDICTED:
E3 ubiquitin-protein ligase SHPRH-like isoform X2 [Cicer
arietinum]
Length = 1670
Score = 113 bits (283), Expect = 2e-23
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSENVSAGN-HEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL C+F+H+RSA ++V N +K+ LKR+K ERVEC CGAVSE
Sbjct: 363 DEMGLGKTVELLACIFAHRRSAYGNDILIDSVPQVNCDKKVALKRLKKERVECACGAVSE 422
Query: 57 SVKYKGLWVQCDICDAWQH 1
S+KY+GLWVQCDICDAWQH
Sbjct: 423 SLKYQGLWVQCDICDAWQH 441
>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
gi|355516770|gb|AES98393.1| ATP-dependent helicase,
putative [Medicago truncatula]
Length = 1764
Score = 113 bits (283), Expect = 2e-23
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSENV-SAGNHEKIGLKRVKMERVECVCGAVSE 58
DEMGLGKTVELL +F+H+RSA E+ ++V EK+ LKR++ ERVEC+CGAVSE
Sbjct: 423 DEMGLGKTVELLALIFAHRRSADESDTLIDSVPQVKGDEKVVLKRLRRERVECICGAVSE 482
Query: 57 SVKYKGLWVQCDICDAWQH 1
S+KY+GLWVQCDICDAWQH
Sbjct: 483 SLKYEGLWVQCDICDAWQH 501
>ref|XP_006371305.1| hypothetical protein POPTR_0019s08910g [Populus trichocarpa]
gi|550317057|gb|ERP49102.1| hypothetical protein
POPTR_0019s08910g [Populus trichocarpa]
Length = 1680
Score = 111 bits (278), Expect = 9e-23
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSENV--SAGNHEKIGLKRVKMERVECVCGAVS 61
DEMGLGKTVELL C+ +H++S S+ G + GN +KI LKR+K ERVECVCGAVS
Sbjct: 367 DEMGLGKTVELLACILAHRKSTSDDGSVVAPTWQNTGN-QKINLKRLKRERVECVCGAVS 425
Query: 60 ESVKYKGLWVQCDICDAWQH 1
+S KY+GLWVQCDICDAWQH
Sbjct: 426 DSYKYRGLWVQCDICDAWQH 445
>ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297327578|gb|EFH57998.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1635
Score = 111 bits (278), Expect = 9e-23
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSENVSAGNHEKIGLKRVKMERVECVCGAVSES 55
DEMGLGKTVELL C+FSH++ A + S S + GL+R+K ERVEC+CGAVSES
Sbjct: 346 DEMGLGKTVELLACIFSHRKPAEDEISVSNGSSFTDDLNAGLRRLKRERVECICGAVSES 405
Query: 54 VKYKGLWVQCDICDAWQH 1
KYKG+WVQCD+CDAWQH
Sbjct: 406 RKYKGVWVQCDLCDAWQH 423
>ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing
protein [Arabidopsis thaliana]
gi|330254782|gb|AEC09876.1| RING-finger, DEAD-like
helicase, PHD and SNF2 domain-containing protein
[Arabidopsis thaliana]
Length = 1664
Score = 111 bits (278), Expect = 9e-23
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSENVSAGNHEKIGLKRVKMERVECVCGAVSES 55
DEMGLGKTVELL C+FSH++ A + S S + GL+R+K ERVEC+CGAVSES
Sbjct: 362 DEMGLGKTVELLACIFSHRKPAEDEISVSNGSSVTDVLNAGLRRLKRERVECICGAVSES 421
Query: 54 VKYKGLWVQCDICDAWQH 1
KYKG+WVQCD+CDAWQH
Sbjct: 422 HKYKGVWVQCDLCDAWQH 439
>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1320
Score = 111 bits (278), Expect = 9e-23
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSENV--SAGNHEKIGLKRVKMERVECVCGAVS 61
DEMGLGKTVELL C+ +H++S S+ G + GN +KI LKR+K ERVECVCGAVS
Sbjct: 367 DEMGLGKTVELLACILAHRKSTSDDGSVVAPTWQNTGN-QKINLKRLKRERVECVCGAVS 425
Query: 60 ESVKYKGLWVQCDICDAWQH 1
+S KY+GLWVQCDICDAWQH
Sbjct: 426 DSYKYRGLWVQCDICDAWQH 445
>ref|XP_006293440.1| hypothetical protein CARUB_v10022506mg [Capsella rubella]
gi|482562148|gb|EOA26338.1| hypothetical protein
CARUB_v10022506mg [Capsella rubella]
Length = 1478
Score = 111 bits (277), Expect = 1e-22
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSENVSAGNHEKIGLKRVKMERVECVCGAVSES 55
DEMGLGKTVELL C+FSH++ A + S + + GLKR+K ERVEC+CGAVSES
Sbjct: 360 DEMGLGKTVELLACIFSHRKPAEDEISVSNVPTVTDDWNTGLKRLKRERVECICGAVSES 419
Query: 54 VKYKGLWVQCDICDAWQH 1
KYKG+WVQCD+CDAWQH
Sbjct: 420 RKYKGVWVQCDLCDAWQH 437
>ref|XP_006411344.1| hypothetical protein EUTSA_v10016132mg [Eutrema salsugineum]
gi|557112513|gb|ESQ52797.1| hypothetical protein
EUTSA_v10016132mg [Eutrema salsugineum]
Length = 1660
Score = 110 bits (276), Expect = 1e-22
Identities = 51/78 (65%), Positives = 58/78 (74%)
Frame = -3
Query: 234 DEMGLGKTVELLGCVFSHQRSASEAGCFSENVSAGNHEKIGLKRVKMERVECVCGAVSES 55
DEMGLGKTVELL C+FSH++ S S K GLKR+K ERVEC+CGAVSES
Sbjct: 361 DEMGLGKTVELLACIFSHRKPDENEISVSNGSSFTEDWKTGLKRLKRERVECICGAVSES 420
Query: 54 VKYKGLWVQCDICDAWQH 1
KYKG+WVQCD+CDAWQH
Sbjct: 421 RKYKGVWVQCDMCDAWQH 438