BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00022477
         (270 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526177.1| pentatricopeptide repeat-containing protein,...   114   1e-23
gb|EOY16597.1| Pentatricopeptide repeat superfamily protein [The...   111   9e-23
ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi...   111   1e-22
emb|CBI19956.3| unnamed protein product [Vitis vinifera]              111   1e-22
ref|XP_002302197.1| pentatricopeptide repeat-containing family p...   109   3e-22
ref|XP_004502595.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_006297432.1| hypothetical protein CARUB_v10013455mg [Caps...   107   2e-21
ref|XP_003602124.1| Pentatricopeptide repeat-containing protein ...   107   2e-21
ref|XP_002883307.1| hypothetical protein ARALYDRAFT_318888 [Arab...   106   4e-21
gb|EXB90557.1| hypothetical protein L484_001711 [Morus notabilis]     103   2e-20
ref|NP_188784.3| pentatricopeptide repeat-containing protein [Ar...   103   2e-20
gb|AAT71952.1| At3g21470 [Arabidopsis thaliana] gi|53850541|gb|A...   103   2e-20
gb|EMJ01947.1| hypothetical protein PRUPE_ppa027193mg [Prunus pe...   103   3e-20
ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
ref|XP_004292558.1| PREDICTED: pentatricopeptide repeat-containi...   102   7e-20
ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containi...   101   9e-20
gb|EPS58971.1| hypothetical protein M569_15838 [Genlisea aurea]       100   2e-19
ref|XP_006472911.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
gb|ESW09519.1| hypothetical protein PHAVU_009G134400g [Phaseolus...    98   1e-18
ref|XP_006434361.1| hypothetical protein CICLE_v10003713mg, part...    96   6e-18

>ref|XP_002526177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534554|gb|EEF36253.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 293

 Score =  114 bits (285), Expect = 1e-23
 Identities = 50/83 (60%), Positives = 67/83 (80%)
 Frame = -3

Query: 250 KAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMY 71
           +AF  MQ DGF+PDE+TV  VLSACAQ+G LDVGK++H+M + KG++ N+F++N L+DMY
Sbjct: 153 EAFENMQADGFEPDEITVVGVLSACAQLGLLDVGKDVHRMAYNKGIKLNQFIMNALVDMY 212

Query: 70  VKCGDLCSAVSIFERLSEPNNAC 2
            KCGDL +A SIFE ++  NNAC
Sbjct: 213 AKCGDLTTARSIFEGMTYKNNAC 235


>gb|EOY16597.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 578

 Score =  111 bits (278), Expect = 9e-23
 Identities = 51/81 (62%), Positives = 65/81 (80%)
 Frame = -3

Query: 244 FREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMYVK 65
           FR+MQ +GF+PDEVT++S+LSACAQ+G LDVGKEIH +I EKG+  N+FV+N L+DMY K
Sbjct: 287 FRKMQSEGFEPDEVTITSILSACAQLGELDVGKEIHYLIKEKGIVVNQFVLNALLDMYAK 346

Query: 64  CGDLCSAVSIFERLSEPNNAC 2
           CGDL  A  IFE +S   +AC
Sbjct: 347 CGDLAHARLIFEGMSRRTSAC 367


>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
           [Vitis vinifera]
          Length = 575

 Score =  111 bits (277), Expect = 1e-22
 Identities = 49/83 (59%), Positives = 68/83 (81%)
 Frame = -3

Query: 250 KAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMY 71
           +AF +MQ +GF+PDEVT++SVLSAC+Q+G LD GK+IH M++ KG++ N+FV+NGL+DMY
Sbjct: 307 EAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMY 366

Query: 70  VKCGDLCSAVSIFERLSEPNNAC 2
            KCGDL +A  IFE ++  N AC
Sbjct: 367 AKCGDLANARLIFEGMAHRNRAC 389


>emb|CBI19956.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  111 bits (277), Expect = 1e-22
 Identities = 49/83 (59%), Positives = 68/83 (81%)
 Frame = -3

Query: 250 KAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMY 71
           +AF +MQ +GF+PDEVT++SVLSAC+Q+G LD GK+IH M++ KG++ N+FV+NGL+DMY
Sbjct: 178 EAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMY 237

Query: 70  VKCGDLCSAVSIFERLSEPNNAC 2
            KCGDL +A  IFE ++  N AC
Sbjct: 238 AKCGDLANARLIFEGMAHRNRAC 260


>ref|XP_002302197.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222843923|gb|EEE81470.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 440

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = -3

Query: 247 AFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMYV 68
           AF +MQ +G++PDEVTV  VLSACAQ+  LDVGK++H+MI  KG++ N+FVVN L+DMY 
Sbjct: 171 AFGKMQNEGYEPDEVTVVGVLSACAQLSLLDVGKDVHKMICAKGMKLNEFVVNALVDMYA 230

Query: 67  KCGDLCSAVSIFERLSEPNNAC 2
           KCGDL  A  IFER++  NNAC
Sbjct: 231 KCGDLTGARLIFERMTNKNNAC 252


>ref|XP_004502595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Cicer arietinum]
          Length = 533

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = -3

Query: 247 AFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMYV 68
           AF EM V+GF+PDE TV SVLSACAQ+G LD GK IH MI  KG+  N+FV++GL+DMY 
Sbjct: 260 AFEEMGVEGFEPDEFTVVSVLSACAQIGDLDAGKRIHHMIEHKGIAVNQFVLSGLVDMYS 319

Query: 67  KCGDLCSAVSIFERLSEPNNAC 2
           KCGDL +A  +FE  +E NN C
Sbjct: 320 KCGDLVNARLVFESCNEKNNFC 341


>ref|XP_006297432.1| hypothetical protein CARUB_v10013455mg [Capsella rubella]
           gi|482566141|gb|EOA30330.1| hypothetical protein
           CARUB_v10013455mg [Capsella rubella]
          Length = 523

 Score =  107 bits (267), Expect = 2e-21
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = -3

Query: 247 AFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMYV 68
           AF +MQ +G++PD VTVSSVLSACAQ G LDVG+++H +++ KG++ N+FV N LIDMY 
Sbjct: 261 AFYKMQGEGYEPDAVTVSSVLSACAQSGRLDVGRDVHSLVYHKGIELNQFVSNALIDMYA 320

Query: 67  KCGDLCSAVSIFERLSEPNNAC 2
           KCGDL +A S+FE LS+ + AC
Sbjct: 321 KCGDLENATSVFESLSQRSVAC 342


>ref|XP_003602124.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491172|gb|AES72375.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/89 (58%), Positives = 64/89 (71%)
 Frame = -3

Query: 268 CALPIFKAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVN 89
           C     +AF EM VDGF+PDE TV SVLSACAQ+G LD GK++H MI  KG+  N+FV++
Sbjct: 258 CGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLS 317

Query: 88  GLIDMYVKCGDLCSAVSIFERLSEPNNAC 2
           GLIDMY KCGDL +A  +FE  +E N  C
Sbjct: 318 GLIDMYAKCGDLVNARLVFESCNERNVFC 346


>ref|XP_002883307.1| hypothetical protein ARALYDRAFT_318888 [Arabidopsis lyrata subsp.
           lyrata] gi|297329147|gb|EFH59566.1| hypothetical protein
           ARALYDRAFT_318888 [Arabidopsis lyrata subsp. lyrata]
          Length = 523

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/82 (62%), Positives = 64/82 (78%)
 Frame = -3

Query: 247 AFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMYV 68
           AF  MQ +G++PD VTVSSVLSACAQ G LDVG+E+H +I+ KG++ N+FV N LIDMY 
Sbjct: 261 AFYNMQGEGYEPDAVTVSSVLSACAQSGRLDVGREVHSLINRKGIELNQFVSNALIDMYA 320

Query: 67  KCGDLCSAVSIFERLSEPNNAC 2
           KCGDL +A S+FE LS  + AC
Sbjct: 321 KCGDLENATSVFESLSLRSLAC 342


>gb|EXB90557.1| hypothetical protein L484_001711 [Morus notabilis]
          Length = 543

 Score =  103 bits (258), Expect = 2e-20
 Identities = 49/83 (59%), Positives = 62/83 (74%)
 Frame = -3

Query: 250 KAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMY 71
           KAF EM+  G++ DEVT  SVLSACA+ G  DVG+EIH MI EKG++ N+ V+N L+DMY
Sbjct: 278 KAFDEMRAQGYEADEVTTVSVLSACARSGLFDVGREIHDMIIEKGMECNQIVLNALVDMY 337

Query: 70  VKCGDLCSAVSIFERLSEPNNAC 2
            KCGDL  A S+FE ++E N AC
Sbjct: 338 AKCGDLACARSVFEGMTERNAAC 360


>ref|NP_188784.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274363|sp|Q9LVF9.1|PP245_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g21470 gi|11994382|dbj|BAB02341.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332642992|gb|AEE76513.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  103 bits (258), Expect = 2e-20
 Identities = 48/82 (58%), Positives = 64/82 (78%)
 Frame = -3

Query: 247 AFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMYV 68
           AF  MQ +G++PD VTVSS+LSACAQ G LDVG+E+H +I+ +G++ N+FV N LIDMY 
Sbjct: 261 AFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320

Query: 67  KCGDLCSAVSIFERLSEPNNAC 2
           KCGDL +A S+FE +S  + AC
Sbjct: 321 KCGDLENATSVFESISVRSVAC 342


>gb|AAT71952.1| At3g21470 [Arabidopsis thaliana] gi|53850541|gb|AAU95447.1|
           At3g21470 [Arabidopsis thaliana]
          Length = 442

 Score =  103 bits (258), Expect = 2e-20
 Identities = 48/82 (58%), Positives = 64/82 (78%)
 Frame = -3

Query: 247 AFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMYV 68
           AF  MQ +G++PD VTVSS+LSACAQ G LDVG+E+H +I+ +G++ N+FV N LIDMY 
Sbjct: 180 AFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 239

Query: 67  KCGDLCSAVSIFERLSEPNNAC 2
           KCGDL +A S+FE +S  + AC
Sbjct: 240 KCGDLENATSVFESISVRSVAC 261


>gb|EMJ01947.1| hypothetical protein PRUPE_ppa027193mg [Prunus persica]
          Length = 435

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/83 (59%), Positives = 64/83 (77%)
 Frame = -3

Query: 250 KAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMY 71
           KAF +MQ +GF+PDEVTV SVLSACAQ G LDVGK IH ++  K ++ ++ V+N L+DMY
Sbjct: 170 KAFGKMQAEGFEPDEVTVVSVLSACAQSGLLDVGKNIHDILGHKRIKLSQIVLNALVDMY 229

Query: 70  VKCGDLCSAVSIFERLSEPNNAC 2
            KCGDL +A  IFE ++E N+AC
Sbjct: 230 AKCGDLVNARLIFEGMTERNSAC 252


>ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Glycine max]
          Length = 535

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/82 (59%), Positives = 60/82 (73%)
 Frame = -3

Query: 247 AFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMYV 68
           AF  M  +GF+PDE TV SVLSACAQ+G LDVGK+IH MI  KG+  N FV++GL+DMY 
Sbjct: 260 AFEGMGAEGFEPDEFTVVSVLSACAQLGHLDVGKQIHHMIEHKGIVVNPFVLSGLVDMYA 319

Query: 67  KCGDLCSAVSIFERLSEPNNAC 2
           KCGDL +A  +FE  +E N  C
Sbjct: 320 KCGDLVNARLVFEGFTEKNIFC 341


>ref|XP_004292558.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Fragaria vesca subsp. vesca]
          Length = 603

 Score =  102 bits (253), Expect = 7e-20
 Identities = 47/83 (56%), Positives = 61/83 (73%)
 Frame = -3

Query: 250 KAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMY 71
           KAF  MQ +GF+PDE T+ SVLSAC+Q G LDVGK+IH M+    ++ N+ V N L+DMY
Sbjct: 337 KAFENMQAEGFEPDEFTIVSVLSACSQSGLLDVGKDIHNMLSHNRIKLNQIVHNALVDMY 396

Query: 70  VKCGDLCSAVSIFERLSEPNNAC 2
            KCGDL +A  IFE ++E N+AC
Sbjct: 397 AKCGDLINARLIFEEMTERNSAC 419


>ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Solanum lycopersicum]
          Length = 528

 Score =  101 bits (252), Expect = 9e-20
 Identities = 47/82 (57%), Positives = 66/82 (80%)
 Frame = -3

Query: 250 KAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMY 71
           +AF +MQ +G +PDEVTV SVLSAC+Q+  LD+GK+IH+MI +KG++ N++V+NGL+DMY
Sbjct: 253 EAFTKMQDEGLEPDEVTVVSVLSACSQLALLDIGKDIHEMIIQKGIELNQYVLNGLVDMY 312

Query: 70  VKCGDLCSAVSIFERLSEPNNA 5
            KCGDL +A  IFE +   N+A
Sbjct: 313 AKCGDLSNARLIFEGMLLKNDA 334


>gb|EPS58971.1| hypothetical protein M569_15838 [Genlisea aurea]
          Length = 517

 Score =  100 bits (250), Expect = 2e-19
 Identities = 48/80 (60%), Positives = 61/80 (76%)
 Frame = -3

Query: 247 AFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMYV 68
           AF  MQ +GF+PDEVT SS+LSACAQ G LD GKEIH+MI  K +Q N+FV+N L+DMY 
Sbjct: 258 AFITMQAEGFEPDEVTCSSILSACAQSGKLDFGKEIHEMILRKNIQLNEFVLNALVDMYA 317

Query: 67  KCGDLCSAVSIFERLSEPNN 8
           KCGDL +A  IF+ +S  ++
Sbjct: 318 KCGDLENASLIFDGMSRKSS 337


>ref|XP_006472911.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Citrus sinensis]
          Length = 562

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 47/83 (56%), Positives = 62/83 (74%)
 Frame = -3

Query: 250 KAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMY 71
           +AF +MQ + F+PDEVT +S+LSACA +G LD GKEIH MI +K ++ N+FV+N L+DMY
Sbjct: 286 EAFWKMQGERFEPDEVTFASILSACAHLGWLDTGKEIHSMIDKKMMKLNQFVLNALVDMY 345

Query: 70  VKCGDLCSAVSIFERLSEPNNAC 2
            KCGDL +A SIFE +   N  C
Sbjct: 346 AKCGDLANARSIFEEMVHRNVVC 368


>gb|ESW09519.1| hypothetical protein PHAVU_009G134400g [Phaseolus vulgaris]
          Length = 525

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 46/83 (55%), Positives = 59/83 (71%)
 Frame = -3

Query: 250 KAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMY 71
           +AF  M  +GF+PDE TV  VLSAC Q+G LDVGK+IH MI  KG+  N+FV++ L+DMY
Sbjct: 259 QAFEGMGAEGFEPDEFTVVGVLSACGQLGRLDVGKQIHHMIEHKGIAVNQFVLSVLVDMY 318

Query: 70  VKCGDLCSAVSIFERLSEPNNAC 2
            KCGDL +A  +FE  +E N  C
Sbjct: 319 AKCGDLVNARLVFEGFTERNIFC 341


>ref|XP_006434361.1| hypothetical protein CICLE_v10003713mg, partial [Citrus clementina]
           gi|557536483|gb|ESR47601.1| hypothetical protein
           CICLE_v10003713mg, partial [Citrus clementina]
          Length = 502

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 45/83 (54%), Positives = 60/83 (72%)
 Frame = -3

Query: 250 KAFREMQVDGFKPDEVTVSSVLSACAQMGSLDVGKEIHQMIHEKGLQPNKFVVNGLIDMY 71
           + F +MQ +  +PDEVT +S+LSACA +G LD GKEIH MI +K ++ N+FV+N L+DMY
Sbjct: 286 EVFWKMQGERIEPDEVTFASILSACAHLGWLDTGKEIHSMIDKKMIKLNQFVLNALVDMY 345

Query: 70  VKCGDLCSAVSIFERLSEPNNAC 2
            KCGDL +A SIFE +   N  C
Sbjct: 346 AKCGDLANARSIFEEMVHRNVVC 368