BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00022465
         (585 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containi...   132   9e-29
gb|EOX97215.1| Tetratricopeptide repeat (TPR)-like superfamily p...   132   9e-29
ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containi...   129   6e-28
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   128   1e-27
gb|EMJ01003.1| hypothetical protein PRUPE_ppa004794mg [Prunus pe...   122   5e-26
ref|XP_006299009.1| hypothetical protein CARUB_v10015136mg [Caps...   122   9e-26
ref|XP_006409479.1| hypothetical protein EUTSA_v10022658mg [Eutr...   120   3e-25
gb|EXB63632.1| hypothetical protein L484_026974 [Morus notabilis]     118   1e-24
ref|NP_179197.1| pentatricopeptide repeat-containing protein [Ar...   117   3e-24
ref|XP_006423153.1| hypothetical protein CICLE_v10028281mg [Citr...   116   4e-24
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...   116   4e-24
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
gb|ESW03873.1| hypothetical protein PHAVU_011G049000g [Phaseolus...   112   9e-23
gb|EPS61672.1| hypothetical protein M569_13122 [Genlisea aurea]       110   3e-22
ref|XP_004289840.1| PREDICTED: pentatricopeptide repeat-containi...   109   5e-22
ref|XP_002306075.1| pentatricopeptide repeat-containing family p...   105   9e-21
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...   103   4e-20
ref|XP_006856168.1| hypothetical protein AMTR_s00059p00176060 [A...   102   7e-20
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi...    73   6e-11

>ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like isoform X1 [Solanum tuberosum]
           gi|565365876|ref|XP_006349624.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like isoform X2 [Solanum tuberosum]
          Length = 493

 Score =  132 bits (331), Expect = 9e-29
 Identities = 68/138 (49%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYP--QGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDL 248
           IL ++RSKSRW+ ILS  P   G TP QVS I+L++RN P+LA  FF FT   ++ CH +
Sbjct: 47  ILKHHRSKSRWSEILSLAPPTSGFTPSQVSKIILQLRNTPHLALRFFNFTVHRSICCHSV 106

Query: 247 HSFSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSCDS 68
            S++TIIHI++R+R KS+A  L++ AIR           D+   PR+F  LV+TY+SCDS
Sbjct: 107 SSYATIIHILSRSRLKSQALELIKCAIRKFPDIHKP---DSSNPPRIFEILVKTYRSCDS 163

Query: 67  APLVFDVLIRAYLELNRV 14
           AP VFD+LI+AYL+  ++
Sbjct: 164 APFVFDLLIKAYLDSKKI 181


>gb|EOX97215.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508705320|gb|EOX97216.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508705321|gb|EOX97217.1| Tetratricopeptide repeat
           (TPR)-like superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 490

 Score =  132 bits (331), Expect = 9e-29
 Identities = 68/137 (49%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           ILT++RSKSRW+TIL+ +P G TP Q S I L+++NNP+LA  FF FT + +L  H+L S
Sbjct: 47  ILTHHRSKSRWSTILTLFPSGFTPSQFSQITLQLKNNPHLALRFFLFTEQKSLCNHNLSS 106

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEK-PRLFVALVRTYKSCDSA 65
           +STIIHI++RAR K+RA+ L+R AIRT        G++NE    +LF  LV+TY  C SA
Sbjct: 107 YSTIIHILSRARLKTRARELIRVAIRT-------PGMENEPTYLKLFELLVKTYNECGSA 159

Query: 64  PLVFDVLIRAYLELNRV 14
           P VFD+ +++ L++ ++
Sbjct: 160 PFVFDLFVKSCLQMKKL 176


>ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Solanum lycopersicum]
          Length = 495

 Score =  129 bits (324), Expect = 6e-28
 Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYP--QGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDL 248
           IL ++RSKSRW+ ILS  P   G TP QVS I+L++RN P+LA  FF FT   ++ CH L
Sbjct: 49  ILKHHRSKSRWSEILSLAPPTSGFTPSQVSKIILQLRNTPHLALRFFNFTVHRSICCHSL 108

Query: 247 HSFSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSCDS 68
            S++TIIHI++R+R K  A  L++ AIR   P + +  L N   PR F  LV+TY+SCDS
Sbjct: 109 SSYATIIHILSRSRLKPHALELIKCAIRKF-PDTHQPDLSN--PPRFFEILVKTYRSCDS 165

Query: 67  APLVFDVLIRAYLELNRV 14
           AP VFD+L++AYL+  ++
Sbjct: 166 APFVFDLLMKAYLDSKKI 183


>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  128 bits (321), Expect = 1e-27
 Identities = 68/136 (50%), Positives = 94/136 (69%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           IL + RSKSRW+ + S +P+G TP + S I+L+I+NNP+LA SFF +    +L  H L S
Sbjct: 43  ILRHQRSKSRWSHLQSLFPKGFTPTEASQIVLQIKNNPHLALSFFLWCHHKSLCNHTLLS 102

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSCDSAP 62
           +STIIHI+ARAR KS+A  L+RTAIR  D +       + + P++F +LV+TY SC SAP
Sbjct: 103 YSTIIHILARARLKSQALGLIRTAIRVFDDSDE----CSSQPPKIFESLVKTYNSCGSAP 158

Query: 61  LVFDVLIRAYLELNRV 14
            VFD+LI+A L   R+
Sbjct: 159 FVFDLLIKACLNSKRI 174


>gb|EMJ01003.1| hypothetical protein PRUPE_ppa004794mg [Prunus persica]
          Length = 491

 Score =  122 bits (307), Expect = 5e-26
 Identities = 67/137 (48%), Positives = 90/137 (65%), Gaps = 1/137 (0%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           I+TN RSK+RW+ + S YP G      S I L I+NNP LA  FF +T   +L  H+L S
Sbjct: 47  IITNLRSKTRWSYLRSLYPHGFDSNDFSQIALHIKNNPRLALRFFLWTQHKSLCNHNLQS 106

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKP-RLFVALVRTYKSCDSA 65
            STIIHI+AR R +S+A  L+RTAIR  +  S      +E KP ++F +LV+TY+ CDSA
Sbjct: 107 HSTIIHILARGRLRSQAYDLIRTAIRVSESESIG---SHESKPLKVFESLVKTYRQCDSA 163

Query: 64  PLVFDVLIRAYLELNRV 14
           P VFD+LI+A LE  ++
Sbjct: 164 PFVFDLLIKACLESKKI 180


>ref|XP_006299009.1| hypothetical protein CARUB_v10015136mg [Capsella rubella]
           gi|482567718|gb|EOA31907.1| hypothetical protein
           CARUB_v10015136mg [Capsella rubella]
          Length = 492

 Score =  122 bits (305), Expect = 9e-26
 Identities = 65/140 (46%), Positives = 92/140 (65%), Gaps = 4/140 (2%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           ILT++RSKSRW+T+ S +P G TP Q S I LR+RNNP+L+  FF FT   +L  HD+ S
Sbjct: 42  ILTHHRSKSRWSTLRSLHPYGFTPFQFSEITLRLRNNPHLSLRFFLFTRRFSLCSHDVGS 101

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKP----RLFVALVRTYKSC 74
            ST+IHI+AR+R KS A  ++R A+R  D        DNEE      ++F +LV++Y  C
Sbjct: 102 CSTLIHILARSRLKSHASEVIRLALRLAD--------DNEEGENRVLKVFRSLVKSYNLC 153

Query: 73  DSAPLVFDVLIRAYLELNRV 14
            SAP VFD+L+++ L+   +
Sbjct: 154 GSAPFVFDLLVKSCLDSKEI 173


>ref|XP_006409479.1| hypothetical protein EUTSA_v10022658mg [Eutrema salsugineum]
           gi|557110641|gb|ESQ50932.1| hypothetical protein
           EUTSA_v10022658mg [Eutrema salsugineum]
          Length = 495

 Score =  120 bits (301), Expect = 3e-25
 Identities = 63/137 (45%), Positives = 94/137 (68%), Gaps = 1/137 (0%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           ILT++RSKSRW+T+ S  P G TP Q S I LR+RNNP+L+  FF FT  ++L  HD+ S
Sbjct: 55  ILTHHRSKSRWSTLRSLNPSGFTPSQFSEITLRLRNNPHLSLRFFLFTRRHSLCPHDIGS 114

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEK-PRLFVALVRTYKSCDSA 65
            ST+IHI+AR+R K+ A+ ++R A+R        GG + E++  R+F +L+++Y  C SA
Sbjct: 115 CSTLIHILARSRLKTDARDVIRLALRLA------GGDEEEDRVSRVFRSLIKSYNRCGSA 168

Query: 64  PLVFDVLIRAYLELNRV 14
           P VFD+LI++ L+   +
Sbjct: 169 PFVFDLLIKSCLDSKEI 185


>gb|EXB63632.1| hypothetical protein L484_026974 [Morus notabilis]
          Length = 476

 Score =  118 bits (296), Expect = 1e-24
 Identities = 65/141 (46%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           +LT+ RSKSRWA + S  P G  P + S I L ++NNP+LA  FF +T  N+L  H+L S
Sbjct: 45  VLTHQRSKSRWAHLRSLRPNGFAPSEFSQIALHLKNNPHLALRFFLWTHRNSLCDHNLSS 104

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKP-RLFVALVRTYKSCDSA 65
           +ST+IHI+AR R K +A  ++R AIR     S     + E KP ++F  LV+TY+ C SA
Sbjct: 105 YSTLIHILARGRLKRQALIVLRDAIR----VSRLENGELESKPLKVFETLVKTYRQCGSA 160

Query: 64  PLVFDVLIRAYLELNRVGSCL 2
           P VFD+LI A L+L ++ S +
Sbjct: 161 PFVFDLLIEACLDLKKIDSSI 181


>ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15980 gi|5306237|gb|AAD41970.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251359|gb|AEC06453.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 498

 Score =  117 bits (292), Expect = 3e-24
 Identities = 60/136 (44%), Positives = 87/136 (63%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           ILT++RSKSRW+T+ S  P G TP Q S I L +RNNP+L+  FF FT   +L  HD HS
Sbjct: 48  ILTHHRSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHS 107

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSCDSAP 62
            ST+IHI++R+R KS A  ++R A+R           D +   ++F +L+++Y  C SAP
Sbjct: 108 CSTLIHILSRSRLKSHASEIIRLALRLAATDE-----DEDRVLKVFRSLIKSYNRCGSAP 162

Query: 61  LVFDVLIRAYLELNRV 14
            VFD+LI++ L+   +
Sbjct: 163 FVFDLLIKSCLDSKEI 178


>ref|XP_006423153.1| hypothetical protein CICLE_v10028281mg [Citrus clementina]
           gi|567861000|ref|XP_006423154.1| hypothetical protein
           CICLE_v10028281mg [Citrus clementina]
           gi|567861002|ref|XP_006423155.1| hypothetical protein
           CICLE_v10028281mg [Citrus clementina]
           gi|568851351|ref|XP_006479357.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like isoform X1 [Citrus sinensis]
           gi|568851353|ref|XP_006479358.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like isoform X2 [Citrus sinensis]
           gi|557525087|gb|ESR36393.1| hypothetical protein
           CICLE_v10028281mg [Citrus clementina]
           gi|557525088|gb|ESR36394.1| hypothetical protein
           CICLE_v10028281mg [Citrus clementina]
           gi|557525089|gb|ESR36395.1| hypothetical protein
           CICLE_v10028281mg [Citrus clementina]
          Length = 494

 Score =  116 bits (291), Expect = 4e-24
 Identities = 62/136 (45%), Positives = 88/136 (64%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           +LT++RSKSRW  +LS    GLTP Q S I L ++NNP+LA  FF FT   +L  H L S
Sbjct: 48  LLTHHRSKSRWNHLLSLCRSGLTPTQFSQIALGLKNNPHLALHFFSFTQHKSLCKHSLSS 107

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSCDSAP 62
           ++TIIHI++RAR    A+ ++R A+R+          +N+ K +LF  LV+TY+ C SAP
Sbjct: 108 YATIIHILSRARLIGPARDVIRVALRS---------PENDPKLKLFEVLVKTYRECGSAP 158

Query: 61  LVFDVLIRAYLELNRV 14
            VFD+LI+  LE+  +
Sbjct: 159 FVFDLLIKCCLEVKNI 174


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score =  116 bits (291), Expect = 4e-24
 Identities = 62/136 (45%), Positives = 84/136 (61%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           ILT++RSKSRW+ + S  P G+TP + S I L I+N P LA  FF +T   +L  H+L S
Sbjct: 41  ILTHHRSKSRWSNLRSACPNGITPAEFSEITLHIKNKPQLALRFFLWTKSKSLCNHNLAS 100

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSCDSAP 62
           +S+IIH++ARAR  S A  L+RTAIR            N     LF  LV+TY+   SAP
Sbjct: 101 YSSIIHLLARARLSSHAYDLIRTAIRASHQNDEENCRFNSRPLNLFETLVKTYRDSGSAP 160

Query: 61  LVFDVLIRAYLELNRV 14
            VFD+LI+A L+  ++
Sbjct: 161 FVFDLLIKACLDSKKL 176


>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score =  114 bits (284), Expect = 2e-23
 Identities = 63/145 (43%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           +LT+ RSKSRW  + S  P G  P + S ILL+I+NNP+LA  FF +T   +L  H+L S
Sbjct: 49  VLTHQRSKSRWRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLIS 108

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTC-----DPASSRGGLDNEEKPRLFVALVRTYKS 77
           +ST+IHI+AR R ++ A+ +++TAIR       D  S           +LF  LV+TYK 
Sbjct: 109 YSTLIHILARGRLRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYKR 168

Query: 76  CDSAPLVFDVLIRAYLELNRVGSCL 2
           C SAP VFD+LI+A L+  ++ S +
Sbjct: 169 CGSAPFVFDLLIKALLDSKKLDSSI 193


>ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
           gi|449472579|ref|XP_004153637.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score =  114 bits (284), Expect = 2e-23
 Identities = 63/145 (43%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           +LT+ RSKSRW  + S  P G  P + S ILL+I+NNP+LA  FF +T   +L  H+L S
Sbjct: 49  VLTHQRSKSRWRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLIS 108

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTC-----DPASSRGGLDNEEKPRLFVALVRTYKS 77
           +ST+IHI+AR R ++ A+ +++TAIR       D  S           +LF  LV+TYK 
Sbjct: 109 YSTLIHILARGRLRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYKR 168

Query: 76  CDSAPLVFDVLIRAYLELNRVGSCL 2
           C SAP VFD+LI+A L+  ++ S +
Sbjct: 169 CGSAPFVFDLLIKALLDSKKLDSSI 193


>gb|ESW03873.1| hypothetical protein PHAVU_011G049000g [Phaseolus vulgaris]
          Length = 439

 Score =  112 bits (279), Expect = 9e-23
 Identities = 60/136 (44%), Positives = 82/136 (60%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHS 242
           IL N+RSKSRW+ + S  P G+ PL+ S I L ++N P LA  FF +T   +L  H+L S
Sbjct: 41  ILINHRSKSRWSNLRSACPNGIDPLEFSQITLHLKNKPQLALRFFLWTKSKSLCHHNLAS 100

Query: 241 FSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSCDSAP 62
           +S IIH++AR R  S A  ++RTAIR  D    +          LF  LV+TY+   SAP
Sbjct: 101 YSAIIHLLARGRLSSDASHVIRTAIRDSDQTDDQNCRFASPPLNLFETLVKTYRDFGSAP 160

Query: 61  LVFDVLIRAYLELNRV 14
            VFD+LI+A L+  +V
Sbjct: 161 FVFDLLIKACLDSRKV 176


>gb|EPS61672.1| hypothetical protein M569_13122 [Genlisea aurea]
          Length = 464

 Score =  110 bits (275), Expect = 3e-22
 Identities = 59/142 (41%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHY--PQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDL 248
           +L ++RSKSRW+ + S    P  LTP   S + LRIRNNP L  +FF FT   +L+ H L
Sbjct: 25  VLQHHRSKSRWSNLRSLLSGPANLTPSHFSQVALRIRNNPRLVLAFFHFTLRYSLSSHSL 84

Query: 247 HSFSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSCDS 68
            S++TIIHI+AR+R+KS+A  ++ +A+R      S     N+    +  AL+++Y+ CDS
Sbjct: 85  SSYATIIHILARSRRKSQALGVIISAMR------SHKDNTNQTPIAILQALIKSYRVCDS 138

Query: 67  APLVFDVLIRAYLELNRVGSCL 2
           AP VFD+L++A ++  ++ S L
Sbjct: 139 APFVFDLLVKACVDSKKLDSAL 160


>ref|XP_004289840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Fragaria vesca subsp. vesca]
          Length = 493

 Score =  109 bits (273), Expect = 5e-22
 Identities = 62/138 (44%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFT--TENALTCHDL 248
           ILT  RSKSRW  + + YP G TP   S I L+I+NNP+L   FF++T    N+L  H+L
Sbjct: 51  ILTQLRSKSRWGYLRTLYPSGFTPNDFSQISLQIKNNPHLVLRFFQWTQNKNNSLCAHNL 110

Query: 247 HSFSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSCDS 68
            S+STIIHI+AR+R KS+A +L+  AI   +P              +F  LV+TY+ C S
Sbjct: 111 LSYSTIIHILARSRLKSQAYSLIGDAIWVWEPL------------EVFETLVKTYRQCGS 158

Query: 67  APLVFDVLIRAYLELNRV 14
           AP VF+ LI+A LE  ++
Sbjct: 159 APFVFNYLIKACLESKKI 176


>ref|XP_002306075.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222849039|gb|EEE86586.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 498

 Score =  105 bits (262), Expect = 9e-21
 Identities = 61/141 (43%), Positives = 92/141 (65%), Gaps = 5/141 (3%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGL-TPLQVSH---ILLRIRNNPNLASSFFRFTTENALTC- 257
           +LT++RSKSRW+ + S       TPL   H   I L++++NP+LA SFF FT  N+  C 
Sbjct: 46  LLTHHRSKSRWSHLRSLLTTTTSTPLAPGHFSLITLKLKSNPHLALSFFHFTLHNSSLCS 105

Query: 256 HDLHSFSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKS 77
           H+L S++TIIHI++RAR K+ AQ ++R  +R      S+      ++ R F  LV++Y+ 
Sbjct: 106 HNLRSYATIIHILSRARLKAHAQEIIRAGLR------SQILYHLLKEVRFFEVLVKSYRE 159

Query: 76  CDSAPLVFDVLIRAYLELNRV 14
           CDSAP VFD+LI++ LEL ++
Sbjct: 160 CDSAPFVFDLLIKSCLELKKI 180


>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  103 bits (256), Expect = 4e-20
 Identities = 58/140 (41%), Positives = 85/140 (60%), Gaps = 4/140 (2%)
 Frame = -3

Query: 421 ILTNYRSKSRWA---TILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTC-H 254
           +L ++RSKSRW    +++    + LTP   S I+L +++NP LA  FF FT  N   C H
Sbjct: 41  LLIHHRSKSRWTHLRSLILTSNKTLTPTHFSQIILLLKSNPRLALRFFHFTLRNPSFCSH 100

Query: 253 DLHSFSTIIHIVARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSC 74
           DL S STI HI++RAR K +AQ+++  A  +        G    +  + F  LV+TY+ C
Sbjct: 101 DLRSISTITHILSRARLKPQAQSIIHLAFTSPVLVDDSNG----QALKFFEILVKTYREC 156

Query: 73  DSAPLVFDVLIRAYLELNRV 14
           DSAP VFD+LI++ LEL ++
Sbjct: 157 DSAPFVFDLLIKSCLELKKI 176


>ref|XP_006856168.1| hypothetical protein AMTR_s00059p00176060 [Amborella trichopoda]
           gi|548860027|gb|ERN17635.1| hypothetical protein
           AMTR_s00059p00176060 [Amborella trichopoda]
          Length = 511

 Score =  102 bits (254), Expect = 7e-20
 Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 5/141 (3%)
 Frame = -3

Query: 421 ILTNYRSKSRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTC--HDL 248
           IL  +RSKSRW  + +  PQG  P QVS I++ +RN P+LA +FF ++ +       H+L
Sbjct: 65  ILKEHRSKSRWNYLKASCPQGFNPQQVSQIIINLRNKPHLALAFFYWSAKQKQNSYKHNL 124

Query: 247 HSFSTIIHIVARARKKSRAQTLMRTAI---RTCDPASSRGGLDNEEKPRLFVALVRTYKS 77
            S+ TIIHI+AR+R K+  ++L+  A+   ++   +     L   E   L   L+RTY+S
Sbjct: 125 LSYCTIIHILARSRLKNHVRSLILKAMVEEQSLSLSPEGPSLSISELGNLLGTLIRTYRS 184

Query: 76  CDSAPLVFDVLIRAYLELNRV 14
           CDS PLVFD+LI  +L   +V
Sbjct: 185 CDSCPLVFDLLIEGHLRAKKV 205


>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 39/132 (29%), Positives = 73/132 (55%)
 Frame = -3

Query: 397 SRWATILSHYPQGLTPLQVSHILLRIRNNPNLASSFFRFTTENALTCHDLHSFSTIIHIV 218
           S WA  L+    GLTP ++ HI+L+I+ +  L+  FF +       C  L ++S I+HI+
Sbjct: 143 SDWAK-LNSMSTGLTPYRMKHIMLKIKKDHVLSFEFFNWVKAQNPNCQTLETYSIILHIL 201

Query: 217 ARARKKSRAQTLMRTAIRTCDPASSRGGLDNEEKPRLFVALVRTYKSCDSAPLVFDVLIR 38
            +  K   A+++++  +         G +D+  K  LF A++ +Y+ CDS+P VFD L +
Sbjct: 202 TKNHKFKSAESVLKGIL-------GSGSIDHPSK--LFEAILYSYRICDSSPCVFDSLFK 252

Query: 37  AYLELNRVGSCL 2
            Y ++ ++ + +
Sbjct: 253 TYAQMKKLRNAI 264