BLASTX nr result
ID: Rheum21_contig00022442
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00022442
(1258 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ07643.1| hypothetical protein PRUPE_ppa000111mg [Prunus pe... 181 4e-43
ref|XP_006472033.1| PREDICTED: DNA polymerase zeta catalytic sub... 173 2e-40
ref|XP_006472032.1| PREDICTED: DNA polymerase zeta catalytic sub... 173 2e-40
ref|XP_006433339.1| hypothetical protein CICLE_v10003639mg [Citr... 170 1e-39
gb|EOY11310.1| Recovery protein 3 isoform 2, partial [Theobroma ... 167 6e-39
gb|EOY11309.1| Recovery protein 3 isoform 1 [Theobroma cacao] 167 6e-39
gb|EOY11311.1| Recovery protein 3 isoform 3 [Theobroma cacao] gi... 164 5e-38
gb|EXC54611.1| Retrovirus-related Pol polyprotein from transposo... 160 8e-37
ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, par... 158 5e-36
ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 158 5e-36
gb|EXC02386.1| Retrovirus-related Pol polyprotein from transposo... 156 1e-35
emb|CBI36804.3| unnamed protein product [Vitis vinifera] 155 4e-35
ref|XP_006577241.1| PREDICTED: DNA polymerase zeta catalytic sub... 153 1e-34
ref|XP_006577240.1| PREDICTED: DNA polymerase zeta catalytic sub... 153 1e-34
ref|XP_006577239.1| PREDICTED: DNA polymerase zeta catalytic sub... 153 1e-34
ref|XP_002319017.2| hypothetical protein POPTR_0013s02320g [Popu... 147 7e-33
ref|XP_002319016.2| hypothetical protein POPTR_0013s02320g [Popu... 147 7e-33
ref|XP_003626277.1| DNA polymerase [Medicago truncatula] gi|3555... 144 1e-31
ref|XP_006855469.1| hypothetical protein AMTR_s00057p00185570 [A... 141 5e-31
ref|XP_004494955.1| PREDICTED: DNA polymerase zeta catalytic sub... 141 5e-31
>gb|EMJ07643.1| hypothetical protein PRUPE_ppa000111mg [Prunus persica]
Length = 1771
Score = 181 bits (460), Expect = 4e-43
Identities = 116/281 (41%), Positives = 152/281 (54%), Gaps = 9/281 (3%)
Frame = -2
Query: 1236 FLGHQVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQ 1057
F + D E L LL+WLA+SQA +D NSDDEL+ ETILSPLLP TI+KV+E+AN +Y+
Sbjct: 407 FTEERAADNEALGLLRWLATSQAADDINSDDELVCETILSPLLPATTIDKVLEKANVDYE 466
Query: 1056 DESQKECQDILDSVENLIDFEGLKLKGS--ADSENLSQRLSNYKIPQVDGAGDDKHSAFA 883
ESQKECQDILDSV +LIDFEG K K S +D + S+R S Y IP+VDG GDD S
Sbjct: 467 TESQKECQDILDSVGDLIDFEGGKEKASYPSDRNHSSKRSSEYVIPRVDGCGDDAISTPC 526
Query: 882 ANSSDEEMDVE---LIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQP 712
SS ++E R+ H +QD +S SLW LP ++ Q +G
Sbjct: 527 DGSSGSFSEIEGKSEFRTSDHQVQDDSSSFNHKHKRKKSLWGSLPLSATQKMKTEGELIN 586
Query: 711 ADVSVEHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLSECSVRDL 532
+ SS + A IG +S +L+ CSVRDL
Sbjct: 587 S----------------------------SSEDQVGKRAGIGACDLKESSMLARCSVRDL 618
Query: 531 MRKKRSYRSEQSECTSRGSKSV----SSDDEQAFIPRKLEF 421
MR+KRSYR E EC S+G K V +++ ++L+F
Sbjct: 619 MRRKRSYRIEPPECGSQGIKEVLLGREENEDTLLCAKRLDF 659
>ref|XP_006472033.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X2
[Citrus sinensis]
Length = 1566
Score = 173 bits (438), Expect = 2e-40
Identities = 118/295 (40%), Positives = 165/295 (55%), Gaps = 18/295 (6%)
Frame = -2
Query: 1230 GHQVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDE 1051
G + D E L LLKWLA+SQA ED NSDDEL+ ETILSPLLP TI+KV+E+AN++Y+ E
Sbjct: 206 GQKATDTEALGLLKWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKANTDYERE 265
Query: 1050 SQKECQDILDSVENLIDFEGLKLKGSA--DSENLSQRLSNYKIPQVDGAGDDKH----SA 889
SQKECQDILDS+E+ ++ +GL+ + S+ D N + SN KIPQ+DG+ DD + S
Sbjct: 266 SQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSNKKIPQIDGSSDDLYLLPCSG 325
Query: 888 FAANSSDEEMDVELIRSHAHLL-QDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQP 712
+ NSS +E+ E IRS H + QD + LW LPF+ ++ + D
Sbjct: 326 SSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQFNKDIETVS 385
Query: 711 ADVS-------VEHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLS 553
++S +H + E SF A L+ A D ++ ++
Sbjct: 386 CNISNLCVTEVKDHGATGSLVGNELGKSFDA---LEREDADAHDI--------KEATAVT 434
Query: 552 ECSVRDLMRKKRSYRSEQSECTSRGSKSVSSDDEQ----AFIPRKLEFHTTQSED 400
SVRDLMR+KRSYR E SEC K V+ EQ + ++LEF T Q+++
Sbjct: 435 GGSVRDLMRRKRSYR-ESSECEPPRVKRVNVTGEQKNALSMCEKQLEFDTLQNDE 488
>ref|XP_006472032.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X1
[Citrus sinensis]
Length = 1808
Score = 173 bits (438), Expect = 2e-40
Identities = 118/295 (40%), Positives = 165/295 (55%), Gaps = 18/295 (6%)
Frame = -2
Query: 1230 GHQVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDE 1051
G + D E L LLKWLA+SQA ED NSDDEL+ ETILSPLLP TI+KV+E+AN++Y+ E
Sbjct: 448 GQKATDTEALGLLKWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKANTDYERE 507
Query: 1050 SQKECQDILDSVENLIDFEGLKLKGSA--DSENLSQRLSNYKIPQVDGAGDDKH----SA 889
SQKECQDILDS+E+ ++ +GL+ + S+ D N + SN KIPQ+DG+ DD + S
Sbjct: 508 SQKECQDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSNKKIPQIDGSSDDLYLLPCSG 567
Query: 888 FAANSSDEEMDVELIRSHAHLL-QDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQP 712
+ NSS +E+ E IRS H + QD + LW LPF+ ++ + D
Sbjct: 568 SSGNSSKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQFNKDIETVS 627
Query: 711 ADVS-------VEHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLS 553
++S +H + E SF A L+ A D ++ ++
Sbjct: 628 CNISNLCVTEVKDHGATGSLVGNELGKSFDA---LEREDADAHDI--------KEATAVT 676
Query: 552 ECSVRDLMRKKRSYRSEQSECTSRGSKSVSSDDEQ----AFIPRKLEFHTTQSED 400
SVRDLMR+KRSYR E SEC K V+ EQ + ++LEF T Q+++
Sbjct: 677 GGSVRDLMRRKRSYR-ESSECEPPRVKRVNVTGEQKNALSMCEKQLEFDTLQNDE 730
>ref|XP_006433339.1| hypothetical protein CICLE_v10003639mg [Citrus clementina]
gi|557535461|gb|ESR46579.1| hypothetical protein
CICLE_v10003639mg [Citrus clementina]
Length = 1741
Score = 170 bits (431), Expect = 1e-39
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 18/290 (6%)
Frame = -2
Query: 1215 DGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQKEC 1036
D E L LLKWLA+SQA ED NSDDEL+ ETILSPLLP TI+KV+E+AN++Y+ ESQKEC
Sbjct: 415 DTEALGLLKWLATSQAAEDLNSDDELLHETILSPLLPETTIDKVLEKANTDYERESQKEC 474
Query: 1035 QDILDSVENLIDFEGLKLKGSA--DSENLSQRLSNYKIPQVDGAGDDKH----SAFAANS 874
QDILDS+E+ ++ +GL+ + S+ D N + SN KIPQ+DG+ DD + S + NS
Sbjct: 475 QDILDSIEDEVNVDGLEERNSSTVDPSNHPETSSNKKIPQIDGSSDDLYLLPCSGSSGNS 534
Query: 873 SDEEMDVELIRSHAHLL-QDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQPADVS- 700
S +E+ E IRS H + QD + LW LPF+ ++ + D ++S
Sbjct: 535 SKKEIKSESIRSFQHQVPQDTWTNAASKCNVKKKLWGSLPFSVSEQFNKDIETVSCNISN 594
Query: 699 ------VEHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLSECSVR 538
+H + E SF A L+ A D ++ ++ SVR
Sbjct: 595 LCVTEVKDHGATGSLVGNELGKSFDA---LEREDADAHDI--------KEATAVTGGSVR 643
Query: 537 DLMRKKRSYRSEQSECTSRGSKSVSSDDEQ----AFIPRKLEFHTTQSED 400
DLMR+KRSYR E SEC K V+ EQ + ++LEF T Q+++
Sbjct: 644 DLMRRKRSYR-ESSECEPPRVKRVNVTGEQKNALSMCEKQLEFDTLQNDE 692
>gb|EOY11310.1| Recovery protein 3 isoform 2, partial [Theobroma cacao]
Length = 1425
Score = 167 bits (424), Expect = 6e-39
Identities = 112/282 (39%), Positives = 158/282 (56%), Gaps = 11/282 (3%)
Frame = -2
Query: 1215 DGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQKEC 1036
D E L LL WLA+S A +D NSDDEL++ETIL+PLLP TI+KV+E+A+ +Y+ ESQKEC
Sbjct: 202 DTEALGLLAWLANSHAADDINSDDELVRETILTPLLPATTIDKVLEKASIDYESESQKEC 261
Query: 1035 QDILDSVENLIDFEGLKLKGSADSENLSQRLSNYKIPQVDGAGDD----KHSAFAANSSD 868
QDILDSV +LI+F+GLK + S +++ Q S IPQ DG+ DD + ANSS
Sbjct: 262 QDILDSVGDLIEFDGLKERNSHSYDHI-QISSGKHIPQTDGSSDDLGLSPSAGSVANSSK 320
Query: 867 EEMDVELIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFT-SAQSKDLDG--SFQPADVSV 697
+M EL RS QD + LW LP + + + KD SF +
Sbjct: 321 ADMKTELKRSS----QDTSKTFSTKRKRKKLLWGSLPLSVTGKGKDNSDSVSFNITEACA 376
Query: 696 EHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLSECSVRDLMRKKR 517
+ + SF A +L + +P AH + ++ +L EC+VRDLMR+KR
Sbjct: 377 DEIKECL------GTSFSAENDLGKASDPLNKNAHAS-DDKQEAGILVECTVRDLMRRKR 429
Query: 516 SYRSEQSECTSRGSKSVSSDDEQA----FIPRKLEFHTTQSE 403
S R E ++C S S++V E+ F P++L FH + +E
Sbjct: 430 SRRIEPADCGSVRSENVHLKMEKGKDSFFCPKQLNFHGSHNE 471
>gb|EOY11309.1| Recovery protein 3 isoform 1 [Theobroma cacao]
Length = 2035
Score = 167 bits (424), Expect = 6e-39
Identities = 112/282 (39%), Positives = 158/282 (56%), Gaps = 11/282 (3%)
Frame = -2
Query: 1215 DGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQKEC 1036
D E L LL WLA+S A +D NSDDEL++ETIL+PLLP TI+KV+E+A+ +Y+ ESQKEC
Sbjct: 456 DTEALGLLAWLANSHAADDINSDDELVRETILTPLLPATTIDKVLEKASIDYESESQKEC 515
Query: 1035 QDILDSVENLIDFEGLKLKGSADSENLSQRLSNYKIPQVDGAGDD----KHSAFAANSSD 868
QDILDSV +LI+F+GLK + S +++ Q S IPQ DG+ DD + ANSS
Sbjct: 516 QDILDSVGDLIEFDGLKERNSHSYDHI-QISSGKHIPQTDGSSDDLGLSPSAGSVANSSK 574
Query: 867 EEMDVELIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFT-SAQSKDLDG--SFQPADVSV 697
+M EL RS QD + LW LP + + + KD SF +
Sbjct: 575 ADMKTELKRSS----QDTSKTFSTKRKRKKLLWGSLPLSVTGKGKDNSDSVSFNITEACA 630
Query: 696 EHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLSECSVRDLMRKKR 517
+ + SF A +L + +P AH + ++ +L EC+VRDLMR+KR
Sbjct: 631 DEIKECL------GTSFSAENDLGKASDPLNKNAHAS-DDKQEAGILVECTVRDLMRRKR 683
Query: 516 SYRSEQSECTSRGSKSVSSDDEQA----FIPRKLEFHTTQSE 403
S R E ++C S S++V E+ F P++L FH + +E
Sbjct: 684 SRRIEPADCGSVRSENVHLKMEKGKDSFFCPKQLNFHGSHNE 725
>gb|EOY11311.1| Recovery protein 3 isoform 3 [Theobroma cacao]
gi|508719415|gb|EOY11312.1| Recovery protein 3 isoform 3
[Theobroma cacao]
Length = 1590
Score = 164 bits (416), Expect = 5e-38
Identities = 109/276 (39%), Positives = 156/276 (56%), Gaps = 11/276 (3%)
Frame = -2
Query: 1197 LLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQKECQDILDS 1018
L+KWLA+S A +D NSDDEL++ETIL+PLLP TI+KV+E+A+ +Y+ ESQKECQDILDS
Sbjct: 17 LVKWLANSHAADDINSDDELVRETILTPLLPATTIDKVLEKASIDYESESQKECQDILDS 76
Query: 1017 VENLIDFEGLKLKGSADSENLSQRLSNYKIPQVDGAGDD----KHSAFAANSSDEEMDVE 850
V +LI+F+GLK + S +++ Q S IPQ DG+ DD + ANSS +M E
Sbjct: 77 VGDLIEFDGLKERNSHSYDHI-QISSGKHIPQTDGSSDDLGLSPSAGSVANSSKADMKTE 135
Query: 849 LIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFT-SAQSKDLDG--SFQPADVSVEHKSPF 679
L RS QD + LW LP + + + KD SF + +
Sbjct: 136 LKRSS----QDTSKTFSTKRKRKKLLWGSLPLSVTGKGKDNSDSVSFNITEACADEIKEC 191
Query: 678 VFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLSECSVRDLMRKKRSYRSEQ 499
+ SF A +L + +P AH + ++ +L EC+VRDLMR+KRS R E
Sbjct: 192 L------GTSFSAENDLGKASDPLNKNAHAS-DDKQEAGILVECTVRDLMRRKRSRRIEP 244
Query: 498 SECTSRGSKSVSSDDEQA----FIPRKLEFHTTQSE 403
++C S S++V E+ F P++L FH + +E
Sbjct: 245 ADCGSVRSENVHLKMEKGKDSFFCPKQLNFHGSHNE 280
>gb|EXC54611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1609
Score = 160 bits (406), Expect = 8e-37
Identities = 113/310 (36%), Positives = 160/310 (51%), Gaps = 18/310 (5%)
Frame = -2
Query: 1242 SSFLGHQVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSN 1063
+ + G QV D + L LLKWLA+SQA +D NSDDEL+++TILSP LP I +V+E+AN +
Sbjct: 599 ADWAGSQVADKDALGLLKWLATSQAADDINSDDELLRDTILSPFLPATRIEEVLEKANMD 658
Query: 1062 YQDESQKECQDILDSVENLIDFEGLKLKGSADSENLSQRLSNYK-IPQVDGAGDDKHSAF 886
Y+ ESQKECQDILDSV++ +DF+ +K + + LS+ IPQVDGAGDD +
Sbjct: 659 YESESQKECQDILDSVDDFVDFKDIKERADFTKNSRCPNLSSGDFIPQVDGAGDDMFTPP 718
Query: 885 AANSSD---------------EEMDVELIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFT 751
A ++ D +++ +E S +++D S LW LPF
Sbjct: 719 ARSTEDFYATECKRNFDEACEQQVFLEDTLSGKKVVEDAHSSFNHKHKRKKLLWGSLPF- 777
Query: 750 SAQSKDLDGSFQPADVSVEHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSART 571
S K D SF + K P T + +E S N D +
Sbjct: 778 STNEKLKDESF-----CTDTKGPI---TTSPLSGYMGEHEHSSIKNVKTD-----ICDGN 824
Query: 570 DSRVLSECSVRDLMRKKRSYRSEQSECTSRG-SKSVSS-DDEQAFIPRKLEFHTTQSEDE 397
++ L CSVRDLMR+KR +R E EC+S+G KS+S + PR L+F +
Sbjct: 825 ETAPLVVCSVRDLMRRKRHHRVESLECSSQGLEKSLSEMKRKDNIFPRNLDF-------Q 877
Query: 396 VEPVESSNPR 367
V P++ N R
Sbjct: 878 VFPIDEPNKR 887
>ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
Length = 1591
Score = 158 bits (399), Expect = 5e-36
Identities = 109/289 (37%), Positives = 153/289 (52%), Gaps = 10/289 (3%)
Frame = -2
Query: 1236 FLGHQVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQ 1057
++ VD E L LL+WLA+SQA +D NSDDEL+ ETIL PLLP A +++V+ERA+ +Y
Sbjct: 483 YIQRGAVDEEALGLLRWLATSQAAQDINSDDELLCETILGPLLPAANMDQVLERASQDYG 542
Query: 1056 DESQKECQDILDSVENLIDFEGL-KLKGSADSENLSQRLSNYKIPQVDGAGDDKHSAFAA 880
ESQKECQDILDSVE+L FEG K K D E+ + S IPQ+DGA DD S+
Sbjct: 543 SESQKECQDILDSVEDLDGFEGFNKTKCCTDDEHFFRSSSEETIPQLDGAADDMFSSSGG 602
Query: 879 ---NSSDEEMDVELIRSH--AHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQ 715
N+ D +++VE RS A LL D+ SG S W LPF A+ + D
Sbjct: 603 STENTPDRDLNVENERSSKLAILLHDIDSG-SCSRKKEKSFWGSLPFHEAEKVNTDSR-- 659
Query: 714 PADVSVEHKSPFVFANTEAKISFPAAY--ELQSSYNPAPDTAHIGLSARTDSRVLSECSV 541
V P ++ ++ F + + E + A + + E SV
Sbjct: 660 ----CVNSCRPGIYTSSTKDSEFVSCFSGEDGGQVDVTLQNADTSTYNSREGHLFVERSV 715
Query: 540 RDLMRKKRSYRSEQSEC--TSRGSKSVSSDDEQAFIPRKLEFHTTQSED 400
RDLMR+KR+YRSE +C + +V S ++ + R L+ +S +
Sbjct: 716 RDLMRRKRNYRSEPLDCGYGKANNFTVDSRQKKVVLSRDLDSEVLRSNE 764
>ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222413
[Cucumis sativus]
Length = 2868
Score = 158 bits (399), Expect = 5e-36
Identities = 109/289 (37%), Positives = 153/289 (52%), Gaps = 10/289 (3%)
Frame = -2
Query: 1236 FLGHQVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQ 1057
++ VD E L LL+WLA+SQA +D NSDDEL+ ETIL PLLP A +++V+ERA+ +Y
Sbjct: 483 YIQRGAVDEEALGLLRWLATSQAAQDINSDDELLCETILGPLLPAANMDQVLERASQDYG 542
Query: 1056 DESQKECQDILDSVENLIDFEGL-KLKGSADSENLSQRLSNYKIPQVDGAGDDKHSAFAA 880
ESQKECQDILDSVE+L FEG K K D E+ + S IPQ+DGA DD S+
Sbjct: 543 SESQKECQDILDSVEDLDGFEGFNKTKCCTDDEHFFRSSSEETIPQLDGAADDMFSSSGG 602
Query: 879 ---NSSDEEMDVELIRSH--AHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQ 715
N+ D +++VE RS A LL D+ SG S W LPF A+ + D
Sbjct: 603 STENTPDRDLNVENERSSKLAILLHDIDSG-SCSRKKEKSFWGSLPFHEAEKVNTDSR-- 659
Query: 714 PADVSVEHKSPFVFANTEAKISFPAAY--ELQSSYNPAPDTAHIGLSARTDSRVLSECSV 541
V P ++ ++ F + + E + A + + E SV
Sbjct: 660 ----CVNSCRPGIYTSSTKDSEFVSCFSGEDGGQVDVTLQNADTSTYNSREGHLFVERSV 715
Query: 540 RDLMRKKRSYRSEQSEC--TSRGSKSVSSDDEQAFIPRKLEFHTTQSED 400
RDLMR+KR+YRSE +C + +V S ++ + R L+ +S +
Sbjct: 716 RDLMRRKRNYRSEPLDCGYGKANNFTVDSRQKKVVLSRDLDSEVLRSNE 764
>gb|EXC02386.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1854
Score = 156 bits (395), Expect = 1e-35
Identities = 111/303 (36%), Positives = 156/303 (51%), Gaps = 18/303 (5%)
Frame = -2
Query: 1221 VVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQK 1042
V D + L LLKWLA+SQA +D NSDDEL+++TILSP LP I +V+E+AN +Y+ ESQK
Sbjct: 862 VADKDALGLLKWLATSQAADDINSDDELLRDTILSPFLPATRIEEVLEKANMDYESESQK 921
Query: 1041 ECQDILDSVENLIDFEGLKLKGSADSENLSQRLSNYK-IPQVDGAGDDKHSAFAANSSD- 868
ECQDILDSV++ +DF+ +K + + LS+ IPQVDGAGDD + A ++ D
Sbjct: 922 ECQDILDSVDDFVDFKDIKERADFTKNSRCPNLSSGDFIPQVDGAGDDMFTPPARSTEDF 981
Query: 867 --------------EEMDVELIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDL 730
+++ +E S +++D S LW LPF S K
Sbjct: 982 YATECKRNFDEACEQQVFLEDTLSGKKVVEDAHSSFNHKHKRKKLLWGSLPF-STNEKLK 1040
Query: 729 DGSFQPADVSVEHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLSE 550
D SF + K P T + +E S N D + ++ L
Sbjct: 1041 DESF-----CTDTKGPI---TTSPLSGYMGEHEHSSIKNVKTD-----ICDGNETAPLVV 1087
Query: 549 CSVRDLMRKKRSYRSEQSECTSRG-SKSVSS-DDEQAFIPRKLEFHTTQSEDEVEPVESS 376
CSVRDLMR+KR +R E EC+S+G KS+S + PR L+F +V P++
Sbjct: 1088 CSVRDLMRRKRHHRVESLECSSQGLEKSLSEMKRKDNIFPRNLDF-------QVFPIDEP 1140
Query: 375 NPR 367
N R
Sbjct: 1141 NKR 1143
>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 155 bits (391), Expect = 4e-35
Identities = 100/226 (44%), Positives = 133/226 (58%), Gaps = 3/226 (1%)
Frame = -2
Query: 1230 GHQVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDE 1051
G +V D E L LL WLASSQA ED NSDDEL+ +TILSPLLP TI+KV+E+AN +Y++E
Sbjct: 417 GLKVADNEALGLLSWLASSQAAEDINSDDELVCQTILSPLLPTVTIDKVLEKANMDYENE 476
Query: 1050 SQKECQDILDSVENLIDFEGLKLKG--SADSENLSQRLSNYKIPQVDGAGDDKHSAFAAN 877
SQ+ECQDILDSVE+L DF+GLK + S D + Q IPQVDG+GDD + + N
Sbjct: 477 SQQECQDILDSVEDLADFKGLKERASCSTDHSHSPQTSLEKMIPQVDGSGDDPNDC-SGN 535
Query: 876 SSDEEMDVELIRSHAH-LLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQPADVS 700
SS+ EM E R H +LQD + SLW LP T+ Q K D + + S
Sbjct: 536 SSETEMKSETKRFSQHQVLQDTGASFSNKHKRNQSLWGSLPLTTTQ-KACDFNSDYSACS 594
Query: 699 VEHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSR 562
+ K P F++T+ + + ++Q + D +G A SR
Sbjct: 595 MYGKLP-SFSSTDGSLLINISKDVQFDHCGRRDD-EVGTEATAGSR 638
>ref|XP_006577241.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X3
[Glycine max]
Length = 1699
Score = 153 bits (387), Expect = 1e-34
Identities = 112/289 (38%), Positives = 158/289 (54%), Gaps = 13/289 (4%)
Frame = -2
Query: 1224 QVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQ 1045
+ D E +LKWLA+SQA ED NSDDEL+ ETIL+PLLP ATI+KV+E AN Y++ESQ
Sbjct: 132 KAADKEAQNILKWLATSQAAEDINSDDELVYETILTPLLPAATIDKVLEEANIAYENESQ 191
Query: 1044 KECQDILDSVENLIDFE--GLKLKGSADSENLSQRLSNYKIPQVDGAGDDKHS----AFA 883
KECQDILDS++++++ E K S D S+ +PQVDG+ DD+ S + A
Sbjct: 192 KECQDILDSIDDMLELELPNEKPSHSLDHYCPIGASSSSMLPQVDGSNDDEFSSPRDSLA 251
Query: 882 ANSSDEEMDVELIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQPADV 703
SS E++ E R+ H + W LPF+S + DG + A +
Sbjct: 252 GTSSLVEINSEYTRASEHHVLPNTDTSTLIKDKRNKQWGSLPFSSIDKANNDG--EHATL 309
Query: 702 SVEHKSPFVFANTEAKISFPAAYELQSSY-NPAPDTAHIGLSARTDSRV--LSECSVRDL 532
V H PF +E S + Y ++ N A + G A V L CS+RDL
Sbjct: 310 LVTH--PF---ESETGDSAHSNYLNRNEVRNGACFIRNKGRDASDSKEVHKLVNCSLRDL 364
Query: 531 MRKKRSYRSEQSECTSRGSKSVSSD--DEQ--AFIPRKLEFHTTQSEDE 397
MR+KRSYR EQ++C S +K + D +EQ ++L+ T Q+++E
Sbjct: 365 MRRKRSYRVEQADCESGTTKKLLLDRHEEQNACLWQKQLDLKTMQTDEE 413
>ref|XP_006577240.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X2
[Glycine max]
Length = 1750
Score = 153 bits (387), Expect = 1e-34
Identities = 112/289 (38%), Positives = 158/289 (54%), Gaps = 13/289 (4%)
Frame = -2
Query: 1224 QVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQ 1045
+ D E +LKWLA+SQA ED NSDDEL+ ETIL+PLLP ATI+KV+E AN Y++ESQ
Sbjct: 183 KAADKEAQNILKWLATSQAAEDINSDDELVYETILTPLLPAATIDKVLEEANIAYENESQ 242
Query: 1044 KECQDILDSVENLIDFE--GLKLKGSADSENLSQRLSNYKIPQVDGAGDDKHS----AFA 883
KECQDILDS++++++ E K S D S+ +PQVDG+ DD+ S + A
Sbjct: 243 KECQDILDSIDDMLELELPNEKPSHSLDHYCPIGASSSSMLPQVDGSNDDEFSSPRDSLA 302
Query: 882 ANSSDEEMDVELIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQPADV 703
SS E++ E R+ H + W LPF+S + DG + A +
Sbjct: 303 GTSSLVEINSEYTRASEHHVLPNTDTSTLIKDKRNKQWGSLPFSSIDKANNDG--EHATL 360
Query: 702 SVEHKSPFVFANTEAKISFPAAYELQSSY-NPAPDTAHIGLSARTDSRV--LSECSVRDL 532
V H PF +E S + Y ++ N A + G A V L CS+RDL
Sbjct: 361 LVTH--PF---ESETGDSAHSNYLNRNEVRNGACFIRNKGRDASDSKEVHKLVNCSLRDL 415
Query: 531 MRKKRSYRSEQSECTSRGSKSVSSD--DEQ--AFIPRKLEFHTTQSEDE 397
MR+KRSYR EQ++C S +K + D +EQ ++L+ T Q+++E
Sbjct: 416 MRRKRSYRVEQADCESGTTKKLLLDRHEEQNACLWQKQLDLKTMQTDEE 464
>ref|XP_006577239.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X1
[Glycine max]
Length = 1976
Score = 153 bits (387), Expect = 1e-34
Identities = 112/289 (38%), Positives = 158/289 (54%), Gaps = 13/289 (4%)
Frame = -2
Query: 1224 QVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQ 1045
+ D E +LKWLA+SQA ED NSDDEL+ ETIL+PLLP ATI+KV+E AN Y++ESQ
Sbjct: 409 KAADKEAQNILKWLATSQAAEDINSDDELVYETILTPLLPAATIDKVLEEANIAYENESQ 468
Query: 1044 KECQDILDSVENLIDFE--GLKLKGSADSENLSQRLSNYKIPQVDGAGDDKHS----AFA 883
KECQDILDS++++++ E K S D S+ +PQVDG+ DD+ S + A
Sbjct: 469 KECQDILDSIDDMLELELPNEKPSHSLDHYCPIGASSSSMLPQVDGSNDDEFSSPRDSLA 528
Query: 882 ANSSDEEMDVELIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQPADV 703
SS E++ E R+ H + W LPF+S + DG + A +
Sbjct: 529 GTSSLVEINSEYTRASEHHVLPNTDTSTLIKDKRNKQWGSLPFSSIDKANNDG--EHATL 586
Query: 702 SVEHKSPFVFANTEAKISFPAAYELQSSY-NPAPDTAHIGLSARTDSRV--LSECSVRDL 532
V H PF +E S + Y ++ N A + G A V L CS+RDL
Sbjct: 587 LVTH--PF---ESETGDSAHSNYLNRNEVRNGACFIRNKGRDASDSKEVHKLVNCSLRDL 641
Query: 531 MRKKRSYRSEQSECTSRGSKSVSSD--DEQ--AFIPRKLEFHTTQSEDE 397
MR+KRSYR EQ++C S +K + D +EQ ++L+ T Q+++E
Sbjct: 642 MRRKRSYRVEQADCESGTTKKLLLDRHEEQNACLWQKQLDLKTMQTDEE 690
>ref|XP_002319017.2| hypothetical protein POPTR_0013s02320g [Populus trichocarpa]
gi|550324755|gb|EEE94940.2| hypothetical protein
POPTR_0013s02320g [Populus trichocarpa]
Length = 1831
Score = 147 bits (372), Expect = 7e-33
Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 4/333 (1%)
Frame = -2
Query: 1224 QVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQ 1045
+V D E L LL+WLA+SQA ED NSDDELI +TILSPLLP ATI+KV+E+AN +Y+ ESQ
Sbjct: 400 KVADEEALGLLRWLATSQAAEDINSDDELICDTILSPLLPAATIDKVLEKANIDYESESQ 459
Query: 1044 KECQDILDSVENLIDFEGLKLKGSADSENLSQRLSNYKIPQVDGAGDDKHSAFAANSSDE 865
KECQDILDS+E+L++FE K K S ++ Q K+PQ D H + ++ E
Sbjct: 460 KECQDILDSIEDLVNFEVFKEKASHSVDHSPQTSLEKKVPQSDTLCSSPHGSAGSSFKVE 519
Query: 864 EMDVELIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQPADVSVEHKS 685
S +L S SLW LPF+ Q
Sbjct: 520 SKSECKGYSQDQILPTTDSCISNKQKRNRSLWCSLPFSINQK------------------ 561
Query: 684 PFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLSECSVRDLMRKKRSYRS 505
AN + +++ +L N ++ VL CSVRD+MR+KRS R+
Sbjct: 562 ----ANDDPEVARSKVVDLHVDEN----------KNACEASVLVGCSVRDMMRRKRSRRT 607
Query: 504 EQSECTSRGSKSV----SSDDEQAFIPRKLEFHTTQSEDEVEPVESSNPRHSEFHLQADC 337
Q S K+V D+ P++L+ H +++ + V + +
Sbjct: 608 AQHGDGSVRVKNVHLGGEQDESNTLFPKQLDLHILPNDENDKRV------YGPLDFRPSV 661
Query: 336 SQPGTRFHKTTASLALFGGKQDVHASTKCSMFE 238
+ T F +T A A+ HAS+ S +
Sbjct: 662 NNQQTEFLETCAPKAI------PHASSSASSMQ 688
>ref|XP_002319016.2| hypothetical protein POPTR_0013s02320g [Populus trichocarpa]
gi|550324754|gb|EEE94939.2| hypothetical protein
POPTR_0013s02320g [Populus trichocarpa]
Length = 1855
Score = 147 bits (372), Expect = 7e-33
Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 4/333 (1%)
Frame = -2
Query: 1224 QVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQ 1045
+V D E L LL+WLA+SQA ED NSDDELI +TILSPLLP ATI+KV+E+AN +Y+ ESQ
Sbjct: 400 KVADEEALGLLRWLATSQAAEDINSDDELICDTILSPLLPAATIDKVLEKANIDYESESQ 459
Query: 1044 KECQDILDSVENLIDFEGLKLKGSADSENLSQRLSNYKIPQVDGAGDDKHSAFAANSSDE 865
KECQDILDS+E+L++FE K K S ++ Q K+PQ D H + ++ E
Sbjct: 460 KECQDILDSIEDLVNFEVFKEKASHSVDHSPQTSLEKKVPQSDTLCSSPHGSAGSSFKVE 519
Query: 864 EMDVELIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQPADVSVEHKS 685
S +L S SLW LPF+ Q
Sbjct: 520 SKSECKGYSQDQILPTTDSCISNKQKRNRSLWCSLPFSINQK------------------ 561
Query: 684 PFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLSECSVRDLMRKKRSYRS 505
AN + +++ +L N ++ VL CSVRD+MR+KRS R+
Sbjct: 562 ----ANDDPEVARSKVVDLHVDEN----------KNACEASVLVGCSVRDMMRRKRSRRT 607
Query: 504 EQSECTSRGSKSV----SSDDEQAFIPRKLEFHTTQSEDEVEPVESSNPRHSEFHLQADC 337
Q S K+V D+ P++L+ H +++ + V + +
Sbjct: 608 AQHGDGSVRVKNVHLGGEQDESNTLFPKQLDLHILPNDENDKRV------YGPLDFRPSV 661
Query: 336 SQPGTRFHKTTASLALFGGKQDVHASTKCSMFE 238
+ T F +T A A+ HAS+ S +
Sbjct: 662 NNQQTEFLETCAPKAI------PHASSSASSMQ 688
>ref|XP_003626277.1| DNA polymerase [Medicago truncatula] gi|355501292|gb|AES82495.1| DNA
polymerase [Medicago truncatula]
Length = 1096
Score = 144 bits (362), Expect = 1e-31
Identities = 113/304 (37%), Positives = 152/304 (50%), Gaps = 12/304 (3%)
Frame = -2
Query: 1239 SFLGHQVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNY 1060
+F + D E LLKWLA+SQA ED NSDDEL ETILSPL P ATI+K++E+AN Y
Sbjct: 467 TFFRSRDADMEAQNLLKWLATSQAAEDINSDDELACETILSPLPPAATIDKMLEKANMAY 526
Query: 1059 QDESQKECQDILDSVENL--IDFEGLKLKGSADSENLSQRLSNYKIPQVDGAGDDKHSAF 886
+ ESQ+ECQDILDS++++ +D K S D + S+ IPQVDG+ DD+ S+
Sbjct: 527 ESESQQECQDILDSIDDMLALDLPKKKPSRSFDHNCPIEASSDNMIPQVDGSNDDEFSSP 586
Query: 885 AAN----SSDEEMDVELIR-SHAHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGS 721
A+ SS E++ E R S HLL + + W LPF+ + DG
Sbjct: 587 CASLAEISSAVEINSEYKRASENHLLHNTDTSTVNTDKRNRQ-WGSLPFSMTGKVNNDGE 645
Query: 720 FQPADVSVEHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRV--LSEC 547
+ V+ +F S N ++G A V L C
Sbjct: 646 HATSQVA------HLFERETEDSSLSDYLTRNEIKNNKYIKRNVGEGASDSKEVHSLVNC 699
Query: 546 SVRDLMRKKRSYRSEQSECTSRGSKSVSSD---DEQAFIPRKLEFHTTQSEDEVEPVESS 376
S+RDLMR+KRSYR E E S +K ++ D + + KLE T Q+ DEVE
Sbjct: 700 SLRDLMRRKRSYRVEHDERESGTAKKLNLDRHGGTKTCLWPKLELETMQT-DEVEKELQK 758
Query: 375 NPRH 364
N H
Sbjct: 759 NSDH 762
>ref|XP_006855469.1| hypothetical protein AMTR_s00057p00185570 [Amborella trichopoda]
gi|548859235|gb|ERN16936.1| hypothetical protein
AMTR_s00057p00185570 [Amborella trichopoda]
Length = 2047
Score = 141 bits (356), Expect = 5e-31
Identities = 101/259 (38%), Positives = 142/259 (54%), Gaps = 2/259 (0%)
Frame = -2
Query: 1224 QVVDGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQ 1045
+VVD EDL LL+WLASSQA ED ++DDELI ETILSPLLP + KV+E+A+++Y+ ESQ
Sbjct: 481 KVVDVEDLGLLQWLASSQALEDLSTDDELIHETILSPLLPNTALEKVLEKAHTDYESESQ 540
Query: 1044 KECQDILDSVENLIDFEGLKLKG-SADSENLSQRLSNYKIPQVDGAGDDKHSAFAANSSD 868
KECQDILDSV+ + FE L + ++D +N S+ L N IPQ+DG+ DD+ +
Sbjct: 541 KECQDILDSVD-IQKFEDLNQQALNSDCQNHSKTLRN-TIPQIDGSSDDQPLHSRSGCPS 598
Query: 867 EEMDVELIRSHAHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQPADVSVEHK 688
+ + R +A + +S W PLPF+ DG+ S +
Sbjct: 599 KAPNESGTRRNA---EGDSSAGVAGATKNHPKWCPLPFSP------DGNVHEKLHSPCDQ 649
Query: 687 SPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLSECSVRDLMRKKRSYR 508
+++ ++ P L S Y D R L+ECS+RDLMR+KR+ R
Sbjct: 650 DNHTGSSSGSEAGKPCDPSLYSKYTKDLDF--------KPGRKLTECSMRDLMRRKRNSR 701
Query: 507 SEQSEC-TSRGSKSVSSDD 454
SE SE SR K + S +
Sbjct: 702 SEPSELYNSRSFKRMVSGE 720
>ref|XP_004494955.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Cicer
arietinum]
Length = 1914
Score = 141 bits (356), Expect = 5e-31
Identities = 119/383 (31%), Positives = 179/383 (46%), Gaps = 11/383 (2%)
Frame = -2
Query: 1215 DGEDLALLKWLASSQATEDANSDDELIQETILSPLLPVATINKVIERANSNYQDESQKEC 1036
D E LLKWLA+SQA ED +SDDEL ETILSPLLP ATI+K++E+AN Y+ ESQ+EC
Sbjct: 415 DMEAQNLLKWLATSQAAEDIDSDDELACETILSPLLPAATIDKMLEKANMAYESESQQEC 474
Query: 1035 QDILDSVENLIDFEGLKLK--GSADSENLSQRLSNYKIPQVDGAGDDKHSAFAANSSDEE 862
QDILDS++ + + + K K S D + + + IPQVDG+ DD+ S+ A +
Sbjct: 475 QDILDSIDGMFELDLPKEKPYRSFDHNSPVRASPDSMIPQVDGSNDDEFSSPYACLAGTS 534
Query: 861 MDVELIRSH-----AHLLQDVASGXXXXXXXXXSLWVPLPFTSAQSKDLDGSFQPADVSV 697
VE+ H HLL + + W LPF+ + DG + V+
Sbjct: 535 SAVEINSEHEGPSECHLLHNTDTSAVSTAKKIRK-WGSLPFSMTGKVNNDGERPTSQVTP 593
Query: 696 EHKSPFVFANTEAKISFPAAYELQSSYNPAPDTAHIGLSARTDSRVLSECSVRDLMRKKR 517
+S A A + E++++ + G S + L CS+RDLMR+KR
Sbjct: 594 LFES----AGDSALSDYLTINEVKNNTCIRRNDGE-GASDSKEVHGLVSCSLRDLMRRKR 648
Query: 516 SYRSEQSECTSRGSKSVSSD----DEQAFIPRKLEFHTTQSEDEVEPVESSNPRHSEFHL 349
S+R E E S +K + D ++L+ T Q+++E ++ + H
Sbjct: 649 SHRVEHDEHQSGTAKKLILDRHVGPNSRLWQKQLDLETMQTDEEEIELQKYSDHKVSSHD 708
Query: 348 QADCSQPGTRFHKTTASLALFGGKQDVHASTKCSMFEEQLDDPMLQSSFYASTSKNCVSK 169
C G + H + + L K + K FE +D S Y S + +
Sbjct: 709 NLIC---GKQSHPSGSDSFLNLPKDECFGQHKRGCFEASID------SMYQSGACKEENS 759
Query: 168 NINHEYSHPVVSEHREKAASVNT 100
Y+ PV S+ S++T
Sbjct: 760 KDGTAYAKPVASDAYTPNHSLDT 782