BLASTX nr result
ID: Rheum21_contig00022376
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00022376
(444 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI21507.3| unnamed protein product [Vitis vinifera] 111 1e-22
ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-... 111 1e-22
ref|XP_006362783.1| PREDICTED: F-box/kelch-repeat protein SKIP6-... 103 2e-20
ref|XP_004237458.1| PREDICTED: F-box/kelch-repeat protein SKIP6-... 103 2e-20
ref|XP_002310029.1| SKP1 interacting partner 6 family protein [P... 103 2e-20
gb|EMJ07396.1| hypothetical protein PRUPE_ppa014715mg [Prunus pe... 100 3e-19
ref|XP_006581739.1| PREDICTED: F-box/kelch-repeat protein SKIP6-... 99 6e-19
gb|EXC19721.1| F-box/kelch-repeat protein SKIP6 [Morus notabilis] 98 1e-18
gb|ESW09588.1| hypothetical protein PHAVU_009G139400g [Phaseolus... 98 1e-18
ref|XP_004502867.1| PREDICTED: F-box/kelch-repeat protein SKIP6-... 98 1e-18
ref|XP_002532272.1| Protein AFR, putative [Ricinus communis] gi|... 97 2e-18
gb|EOX92274.1| SKP1 interacting partner 6, putative isoform 1 [T... 97 3e-18
ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-... 92 7e-17
ref|XP_006428025.1| hypothetical protein CICLE_v10025908mg [Citr... 92 9e-17
gb|ADE76420.1| unknown [Picea sitchensis] 88 1e-15
ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago t... 86 4e-15
ref|XP_002880409.1| hypothetical protein ARALYDRAFT_481060 [Arab... 85 9e-15
ref|XP_004304859.1| PREDICTED: F-box/kelch-repeat protein SKIP6-... 84 3e-14
ref|XP_006827108.1| hypothetical protein AMTR_s00010p00244540 [A... 83 3e-14
ref|NP_565522.1| F-box/kelch-repeat protein SKIP6 [Arabidopsis t... 82 7e-14
>emb|CBI21507.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 111 bits (277), Expect = 1e-22
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
FDV+ LW ELKG+EKGLPKF+ GAT+A+V G L V+W KG+ KE+E+ CAEIA++K
Sbjct: 254 FDVKEGLWKELKGLEKGLPKFLCGATMANVGGNLVVLWEGKGN-GKEMEISCAEIAIQKC 312
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
++ LRGS+ WS V+L VP GS IV+CLAV
Sbjct: 313 SDGGLRGSIVWSDVILSVPIGSAIVHCLAV 342
>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
Length = 361
Score = 111 bits (277), Expect = 1e-22
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
FDV+ LW ELKG+EKGLPKF+ GAT+A+V G L V+W KG+ KE+E+ CAEIA++K
Sbjct: 271 FDVKEGLWKELKGLEKGLPKFLCGATMANVGGNLVVLWEGKGN-GKEMEISCAEIAIQKC 329
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
++ LRGS+ WS V+L VP GS IV+CLAV
Sbjct: 330 SDGGLRGSIVWSDVILSVPIGSAIVHCLAV 359
>ref|XP_006362783.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Solanum
tuberosum]
Length = 357
Score = 103 bits (258), Expect = 2e-20
Identities = 50/90 (55%), Positives = 67/90 (74%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
+DV+ ++W ELKGV+KGLPKF+ GAT+ + D RL VVW KG KEV++ CAEI V KD
Sbjct: 267 YDVKEDVWKELKGVDKGLPKFLCGATMVNFDDRLCVVWEGKGR-GKEVDIMCAEIEVWKD 325
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
+ L G++ WS ++LVVP+G+ IV CLAV
Sbjct: 326 EDGGLSGNILWSDMILVVPNGASIVQCLAV 355
>ref|XP_004237458.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Solanum
lycopersicum]
Length = 357
Score = 103 bits (258), Expect = 2e-20
Identities = 50/90 (55%), Positives = 67/90 (74%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
+DV+ ++W ELKGV+KGLPKF+ GAT+ + D RL VVW KG KEV++ CAEI V KD
Sbjct: 267 YDVKEDVWKELKGVDKGLPKFLCGATMVNFDDRLCVVWEGKGR-GKEVDIMCAEIEVWKD 325
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
+ L G++ WS ++LVVP+G+ IV CLAV
Sbjct: 326 KDGGLSGNILWSDMILVVPNGASIVQCLAV 355
>ref|XP_002310029.1| SKP1 interacting partner 6 family protein [Populus trichocarpa]
gi|222852932|gb|EEE90479.1| SKP1 interacting partner 6
family protein [Populus trichocarpa]
Length = 362
Score = 103 bits (257), Expect = 2e-20
Identities = 54/90 (60%), Positives = 65/90 (72%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
FDV W EL+GVEK LP+F+ GAT+A+V G+L VVW KG+V KE+EV CAEI VE++
Sbjct: 272 FDVRNGAWKELRGVEKELPRFLCGATMANVGGKLVVVWERKGNV-KEMEVWCAEIEVEEN 330
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
E LRG V W VV VP GS IV+CLAV
Sbjct: 331 GEGELRGRVEWCDVVHKVPIGSSIVHCLAV 360
>gb|EMJ07396.1| hypothetical protein PRUPE_ppa014715mg [Prunus persica]
Length = 366
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/90 (53%), Positives = 65/90 (72%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
FDV+ +W ELKG+EKGLPKF+ GAT+A+V +L V+W KG+ KE+E+ CAEI VEK+
Sbjct: 276 FDVKKRVWKELKGLEKGLPKFLCGATMANVGEKLVVLWEGKGN-GKEIEIWCAEIEVEKN 334
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
+ L+G + WS ++ VP IVNCLAV
Sbjct: 335 GDGELQGKIGWSHKLISVPKNFSIVNCLAV 364
>ref|XP_006581739.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
Length = 362
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/90 (53%), Positives = 66/90 (73%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
FDV +W ELKG+EKGLP+F+ GAT+AD+ G+L VVW +G+ + E+E+ CAEI V+K+
Sbjct: 272 FDVGRGVWEELKGLEKGLPRFLCGATMADLGGKLCVVWECQGN-ENEMEIWCAEIGVKKN 330
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
++ L G + W G VL VP GS IVNC +V
Sbjct: 331 SDGELWGQLVWFGKVLSVPKGSSIVNCSSV 360
>gb|EXC19721.1| F-box/kelch-repeat protein SKIP6 [Morus notabilis]
Length = 373
Score = 98.2 bits (243), Expect = 1e-18
Identities = 49/83 (59%), Positives = 62/83 (74%)
Frame = -3
Query: 421 WSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKDAEDRLRG 242
W ELKGVEKGLPKF+ GAT+A+V G+L VVW +KG+ KE+E+ CAEI V +D + L G
Sbjct: 290 WRELKGVEKGLPKFLCGATMANVGGKLVVVWEEKGN-GKEMEIWCAEIEVSEDKDGGLLG 348
Query: 241 SVAWSGVVLVVPDGSIIVNCLAV 173
++WS VL VP GS IV+C AV
Sbjct: 349 KISWSSKVLSVPVGSSIVHCAAV 371
>gb|ESW09588.1| hypothetical protein PHAVU_009G139400g [Phaseolus vulgaris]
Length = 364
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/90 (53%), Positives = 65/90 (72%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
FDV +W ELKG+EKGLP+F+ GAT+AD+ G+L VVW +GS KE+E+ CAEI V+K+
Sbjct: 274 FDVGRGVWEELKGLEKGLPRFLCGATMADLGGKLCVVWECQGS-GKEMEIWCAEIGVKKN 332
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
+ L G + W G VL VP GS +V+C +V
Sbjct: 333 PDGELWGQLGWFGQVLSVPKGSSVVHCSSV 362
>ref|XP_004502867.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Cicer arietinum]
Length = 349
Score = 97.8 bits (242), Expect = 1e-18
Identities = 49/91 (53%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVK-KEVEVRCAEIAVEK 266
FDV+ LW ELKG++KGLP+F+ GAT+ADV G+L VVW +G+ K KE+++ CAEI V K
Sbjct: 257 FDVKQGLWKELKGLDKGLPRFLCGATMADVGGKLVVVWECQGNEKGKEMDIWCAEIDVNK 316
Query: 265 DAEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
+ + L G V W VL VP GS IV+C +V
Sbjct: 317 NKDGELWGEVCWLNNVLSVPKGSSIVHCSSV 347
>ref|XP_002532272.1| Protein AFR, putative [Ricinus communis]
gi|223528032|gb|EEF30112.1| Protein AFR, putative
[Ricinus communis]
Length = 370
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/91 (56%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
FDVE + W EL+GVEK LP F++GAT+A+V G+L VVW KG+ KE+E+ CAEI VEK
Sbjct: 279 FDVEKDSWKELRGVEKELPTFLAGATMANVGGKLVVVWEKKGN-GKELEIWCAEIEVEKK 337
Query: 262 AEDR-LRGSVAWSGVVLVVPDGSIIVNCLAV 173
ED+ + G + W V+ VP GS IV+CLAV
Sbjct: 338 GEDQEIWGKIKWCDVIHKVPIGSSIVHCLAV 368
>gb|EOX92274.1| SKP1 interacting partner 6, putative isoform 1 [Theobroma cacao]
gi|508700379|gb|EOX92275.1| SKP1 interacting partner 6,
putative isoform 1 [Theobroma cacao]
Length = 365
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/90 (52%), Positives = 61/90 (67%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
+DV+ W ELKG+E+ LP+F+ GAT+A++ G+L VVW K KE+E+ CAEI V+KD
Sbjct: 274 YDVKEGTWKELKGLEEELPRFLCGATMANLGGKLIVVWESKNEGSKEMEIWCAEIEVKKD 333
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
L G WS VVL VP S IV+CLAV
Sbjct: 334 EGGELWGRTEWSDVVLTVPTRSSIVHCLAV 363
>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
Length = 359
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/90 (51%), Positives = 62/90 (68%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
FDV +W ELKG+E LP+F+ GAT+AD+ G+L VVW + KE+E+ CAEI V+K+
Sbjct: 269 FDVGRGVWEELKGLENALPRFLCGATMADLGGKLCVVW-ECQCNGKEMEIWCAEIGVKKN 327
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
++ L G + W G VL VP GS IVNC +V
Sbjct: 328 SDGELWGQLGWFGKVLSVPKGSSIVNCSSV 357
>ref|XP_006428025.1| hypothetical protein CICLE_v10025908mg [Citrus clementina]
gi|568884068|ref|XP_006494752.1| PREDICTED:
F-box/kelch-repeat protein SKIP6-like [Citrus sinensis]
gi|557530015|gb|ESR41265.1| hypothetical protein
CICLE_v10025908mg [Citrus clementina]
Length = 367
Score = 91.7 bits (226), Expect = 9e-17
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKG--SVKKEVEVRCAEIAVE 269
FDV +W EL+GV+K LP+F+ GAT+A++ G+L VVW G KE+ + CAEI VE
Sbjct: 274 FDVSKGVWRELRGVDKDLPRFLCGATMANLGGKLVVVWEGSGGNGNGKEMGIWCAEIEVE 333
Query: 268 KDAEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
+D + L G + WSG+VL VP S IVNC+ V
Sbjct: 334 EDGDGVLWGKICWSGLVLSVPCRSSIVNCVGV 365
>gb|ADE76420.1| unknown [Picea sitchensis]
Length = 352
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/91 (46%), Positives = 63/91 (69%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
+D + W EL+GV+K LPKF+SGATLA+V GRL+VVW G KK ++ CA + V ++
Sbjct: 262 YDPRQDRWLELEGVQKHLPKFLSGATLANVAGRLYVVWEGLGPDKK-TDLLCAALEVHRE 320
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAVG 170
LRG++ WS V+L +P G+ ++CL++G
Sbjct: 321 PNGGLRGTILWSQVILSLPRGTSTIHCLSLG 351
>ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago truncatula]
gi|355491531|gb|AES72734.1| F-box/kelch-repeat protein
SKIP6 [Medicago truncatula]
Length = 356
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 7/97 (7%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVK---KEVEVRCAEIAV 272
FDV+ LW ELKG++K LP+F+ GAT+ADV G+L VVW + ++ KE+E+ CAEI V
Sbjct: 258 FDVKKGLWKELKGLDKSLPRFLCGATMADVGGKLVVVWECQRNLNGKGKEMEIWCAEIDV 317
Query: 271 ----EKDAEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
+K+ + L G V W VL VP GS IV+C +V
Sbjct: 318 KKKKKKNKDGELWGEVCWLNNVLSVPKGSSIVHCNSV 354
>ref|XP_002880409.1| hypothetical protein ARALYDRAFT_481060 [Arabidopsis lyrata subsp.
lyrata] gi|297326248|gb|EFH56668.1| hypothetical protein
ARALYDRAFT_481060 [Arabidopsis lyrata subsp. lyrata]
Length = 372
Score = 85.1 bits (209), Expect = 9e-15
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSV--KKEVEVRCAEIAVE 269
+D + +W ELKGVE LPKF+ GAT+A+ G+L V+W K + +E+ CAEI VE
Sbjct: 280 YDPKERIWKELKGVES-LPKFLCGATMANRGGKLAVLWEGKAGSGGSRRMEIWCAEIDVE 338
Query: 268 KDAEDRLRGSVAWSGVVLVVPDGSIIVNCLA 176
+ E + G + WSG VL VP+ S IVNCLA
Sbjct: 339 RRGEGDIWGKIVWSGTVLTVPNESAIVNCLA 369
>ref|XP_004304859.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Fragaria vesca
subsp. vesca]
Length = 367
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/90 (47%), Positives = 59/90 (65%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
FD + +W ELKGVEK LPKF+ GAT+A++ L V+W K + KE+E+ CAEI V+++
Sbjct: 277 FDAKNRVWKELKGVEKKLPKFLCGATMANMGENLVVLWETKAN-GKEMEIWCAEIEVKEN 335
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAV 173
+ L G + WS +L VP S IV C AV
Sbjct: 336 GDGELWGRIDWSQKLLSVPKHSNIVQCSAV 365
>ref|XP_006827108.1| hypothetical protein AMTR_s00010p00244540 [Amborella trichopoda]
gi|548831537|gb|ERM94345.1| hypothetical protein
AMTR_s00010p00244540 [Amborella trichopoda]
Length = 366
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/91 (45%), Positives = 60/91 (65%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSVKKEVEVRCAEIAVEKD 263
+D E + W EL+GV+K LPKF+ GA+LA+V +L+VVW G KE E+ CAE+ VE
Sbjct: 276 YDSEEDKWMELQGVKKSLPKFLCGASLANVGEKLYVVWEGLGR-NKETELLCAEVDVENK 334
Query: 262 AEDRLRGSVAWSGVVLVVPDGSIIVNCLAVG 170
L G+V W V+L +P G+ ++CL++G
Sbjct: 335 GVGLLWGTVVWYQVILSLPKGASTIHCLSLG 365
>ref|NP_565522.1| F-box/kelch-repeat protein SKIP6 [Arabidopsis thaliana]
gi|75206206|sp|Q9SJ04.1|SKIP6_ARATH RecName:
Full=F-box/kelch-repeat protein SKIP6; AltName:
Full=SKP1-interacting partner 6
gi|4417287|gb|AAD20412.1| SKP1 interacting partner 6
(SKIP6), putative [Arabidopsis thaliana]
gi|20268766|gb|AAM14086.1| putative SKP1 interacting
partner 6 (SKIP6) [Arabidopsis thaliana]
gi|21689879|gb|AAM67500.1| putative SKP1 interacting
partner 6 (SKIP6) [Arabidopsis thaliana]
gi|330252151|gb|AEC07245.1| F-box/kelch-repeat protein
SKIP6 [Arabidopsis thaliana]
Length = 372
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Frame = -3
Query: 442 FDVEGNLWSELKGVEKGLPKFMSGATLADVDGRLFVVWLDKGSV--KKEVEVRCAEIAVE 269
+D + +W ELKGVE LPKF+ GAT+A+ G+L V+W K + +E+ CAEI V
Sbjct: 280 YDPKERIWRELKGVES-LPKFLCGATMANRGGKLTVLWEGKAGSGGSRRMEIWCAEIDVG 338
Query: 268 KDAEDRLRGSVAWSGVVLVVPDGSIIVNCLA 176
+ E + G + WSG VL VP+ S IVNCLA
Sbjct: 339 RRGEREIWGKIEWSGTVLTVPNESAIVNCLA 369