BLASTX nr result
ID: Rheum21_contig00022300
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00022300
(708 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog ... 211 2e-52
emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera] 211 2e-52
gb|EXC23982.1| DNA repair protein XRCC3-like protein [Morus nota... 210 4e-52
gb|EPS72998.1| hypothetical protein M569_01759, partial [Genlise... 206 5e-51
ref|XP_006348882.1| PREDICTED: DNA repair protein XRCC3 homolog ... 206 6e-51
ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog ... 201 1e-49
ref|XP_004498371.1| PREDICTED: DNA repair protein XRCC3 homolog ... 197 3e-48
ref|XP_006279666.1| hypothetical protein CARUB_v10026831mg, part... 196 5e-48
ref|XP_006474178.1| PREDICTED: DNA repair protein XRCC3 homolog ... 195 1e-47
gb|ESW11244.1| hypothetical protein PHAVU_008G013800g [Phaseolus... 195 1e-47
ref|XP_006453378.1| hypothetical protein CICLE_v10008928mg [Citr... 195 1e-47
gb|EOY31825.1| X-ray repair cross complementing 3 (XRCC3) isofor... 195 1e-47
ref|XP_004243278.1| PREDICTED: DNA repair protein XRCC3 homolog ... 193 4e-47
ref|XP_002531657.1| X-ray repair cross complementing protein 3, ... 193 4e-47
ref|NP_200554.1| DNA repair protein XRCC3-like protein [Arabidop... 191 2e-46
ref|XP_006401203.1| hypothetical protein EUTSA_v10015458mg [Eutr... 190 3e-46
ref|XP_004297875.1| PREDICTED: DNA repair protein XRCC3 homolog ... 188 2e-45
ref|XP_002324475.1| hypothetical protein POPTR_0018s10090g [Popu... 187 2e-45
ref|XP_003551821.1| PREDICTED: DNA repair protein XRCC3 homolog ... 187 4e-45
emb|CBI17834.3| unnamed protein product [Vitis vinifera] 181 2e-43
>ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera]
Length = 300
Score = 211 bits (536), Expect = 2e-52
Identities = 113/192 (58%), Positives = 138/192 (71%), Gaps = 8/192 (4%)
Frame = +1
Query: 157 VAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVGGLSAS 336
+ +KC+L CP+LD LAGG+PCNSITE+VAESGSGKT P S+GGL+AS
Sbjct: 13 LTTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAAS 72
Query: 337 SLYFHSEFPFPLRRLRQLDISFCDA--------GDPLDRILVKPLHSADDLFDEMLRLQS 492
SLY HSEFPFP RRL+QL SF + +PLD +LV+ + SAD LFD +L++ S
Sbjct: 73 SLYIHSEFPFPSRRLQQLSQSFRSSYSHVLDSEYNPLDFVLVRGVQSADQLFDVLLKMDS 132
Query: 493 RLVTWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFGLA 672
L+ + P++L+VIDSIAALFR EFENTP DLKRRSSLFFKI+GKLK LA +FGLA
Sbjct: 133 VLL--RPPTQLPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGKLKALAERFGLA 190
Query: 673 VVVTNHVTDVMG 708
VVVTN V D +G
Sbjct: 191 VVVTNQVVDFVG 202
>emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]
Length = 2077
Score = 211 bits (536), Expect = 2e-52
Identities = 113/192 (58%), Positives = 138/192 (71%), Gaps = 8/192 (4%)
Frame = +1
Query: 157 VAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVGGLSAS 336
+ +KC+L CP+LD LAGG+PCNSITE+VAESGSGKT P S+GGL+AS
Sbjct: 1790 LTTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAAS 1849
Query: 337 SLYFHSEFPFPLRRLRQLDISFCDA--------GDPLDRILVKPLHSADDLFDEMLRLQS 492
SLY HSEFPFP RRL+QL SF + +PLD +LV+ + SAD LFD +L++ S
Sbjct: 1850 SLYIHSEFPFPSRRLQQLSQSFRSSYSHVLDSEYNPLDFVLVRGVQSADQLFDVLLKMDS 1909
Query: 493 RLVTWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFGLA 672
L+ + P++L+VIDSIAALFR EFENTP DLKRRSSLFFKI+GKLK LA +FGLA
Sbjct: 1910 VLL--RPPTQLPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGKLKALAERFGLA 1967
Query: 673 VVVTNHVTDVMG 708
VVVTN V D +G
Sbjct: 1968 VVVTNQVVDFVG 1979
>gb|EXC23982.1| DNA repair protein XRCC3-like protein [Morus notabilis]
Length = 299
Score = 210 bits (534), Expect = 4e-52
Identities = 114/198 (57%), Positives = 138/198 (69%), Gaps = 6/198 (3%)
Frame = +1
Query: 133 EDLLERHRVAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPR 312
E+LL R + +KC+L CPVLD L GGIPCNS+TE+VAES SGKT P
Sbjct: 7 ENLLRRPQ-PTQKCTLGCPVLDRCLGGGIPCNSMTELVAESASGKTQFCLQLALSAQLPP 65
Query: 313 SVGGLSASSLYFHSEFPFPLRRLRQLDISFCDAG------DPLDRILVKPLHSADDLFDE 474
S GGLSASSLY H+EFPFP RRL QL +FCD DP D + V +HSAD L DE
Sbjct: 66 SRGGLSASSLYLHTEFPFPFRRLHQLRRAFCDRHSIGREFDPSDNVFVHAVHSADQLLDE 125
Query: 475 MLRLQSRLVTWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLA 654
M +++S L ++P++++VIDSIAALFRSEF+NTP DLKRRSSLFFKI+GKLK L
Sbjct: 126 MRKIESFLS--ERKPRFPVRVIVIDSIAALFRSEFDNTPFDLKRRSSLFFKISGKLKSLV 183
Query: 655 NKFGLAVVVTNHVTDVMG 708
++F +AVVVTN V D MG
Sbjct: 184 DRFNVAVVVTNQVVDFMG 201
>gb|EPS72998.1| hypothetical protein M569_01759, partial [Genlisea aurea]
Length = 269
Score = 206 bits (525), Expect = 5e-51
Identities = 115/193 (59%), Positives = 134/193 (69%), Gaps = 2/193 (1%)
Frame = +1
Query: 133 EDLLERHRVAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPR 312
EDLL R V K +L C +LD L GG+PC +ITEIVAESG+GKT P
Sbjct: 4 EDLLRRPVVG--KVTLGCRLLDRILGGGLPCETITEIVAESGTGKTQLSLQLLLAVQLPA 61
Query: 313 SVGGLSASSLYFHSEFPFPLRRLRQLDISFCD--AGDPLDRILVKPLHSADDLFDEMLRL 486
S GGLSA+SLY HSEFPFPLRRLRQ+ + A DPLD+I V+PLHSADDL D + RL
Sbjct: 62 SHGGLSAASLYLHSEFPFPLRRLRQMSCFYKTLIADDPLDKIFVEPLHSADDLLDVLPRL 121
Query: 487 QSRLVTWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFG 666
+ N IK++VIDSIAALFR EFENTP +LKRRSS+FFKI+ KL+YL KFG
Sbjct: 122 DFLVPKLN------IKIIVIDSIAALFRGEFENTPVELKRRSSMFFKISSKLRYLGRKFG 175
Query: 667 LAVVVTNHVTDVM 705
LAVV+TN V DVM
Sbjct: 176 LAVVITNQVVDVM 188
>ref|XP_006348882.1| PREDICTED: DNA repair protein XRCC3 homolog [Solanum tuberosum]
Length = 287
Score = 206 bits (524), Expect = 6e-51
Identities = 114/193 (59%), Positives = 134/193 (69%), Gaps = 2/193 (1%)
Frame = +1
Query: 133 EDLLER-HRVAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRP 309
EDLL+R +KC++ CPVLD FL GGIPCNSITE+VAESG GKT P
Sbjct: 4 EDLLQRLSPTHTQKCTIGCPVLDRFLGGGIPCNSITELVAESGCGKTQISLQLLLSAQLP 63
Query: 310 RSVGGLSASSLYFHSEFPFPLRRLRQLDISFCDAGDPLDRILVKPLHSADDLFDEMLRLQ 489
S+GGLS SS+Y +SE PFP+RRL QL SF +PLD+IL PLHSA LFD + +L
Sbjct: 64 TSLGGLSGSSIYLYSESPFPVRRLHQLSSSFPTLHNPLDQILTHPLHSAHHLFDVLSQLD 123
Query: 490 SRLVT-WNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFG 666
S L + +S PIKL+VIDSIAALFR EFEN P DLK+RS LFF+I+ KLK A +FG
Sbjct: 124 SLLSSRRDSPSSPPIKLIVIDSIAALFRFEFENNPRDLKQRSGLFFRISSKLKEQARRFG 183
Query: 667 LAVVVTNHVTDVM 705
LAVVV N V DVM
Sbjct: 184 LAVVVINQVVDVM 196
>ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog [Cucumis sativus]
gi|449506730|ref|XP_004162832.1| PREDICTED: DNA repair
protein XRCC3 homolog [Cucumis sativus]
Length = 294
Score = 201 bits (512), Expect = 1e-49
Identities = 105/185 (56%), Positives = 133/185 (71%), Gaps = 4/185 (2%)
Frame = +1
Query: 166 EKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVGGLSASSLY 345
+KC+ CP++D + GG+ C+S+TEIVAESG GKT P S GGL+ASSLY
Sbjct: 14 QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLY 73
Query: 346 FHSEFPFPLRRLRQLDISFCDA----GDPLDRILVKPLHSADDLFDEMLRLQSRLVTWNS 513
H+EFPFP RRL+QL +F + +P D I V+P+HSA LFD M +++S L NS
Sbjct: 74 IHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDIMPKIESSLENRNS 133
Query: 514 THKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFGLAVVVTNHV 693
+ PI+L+VIDSIAALFRS+F NTP+DLKRRSSLFFKI+GKLK LA K+ LAVV+TN V
Sbjct: 134 --QLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQV 191
Query: 694 TDVMG 708
D+MG
Sbjct: 192 VDLMG 196
>ref|XP_004498371.1| PREDICTED: DNA repair protein XRCC3 homolog [Cicer arietinum]
Length = 296
Score = 197 bits (501), Expect = 3e-48
Identities = 102/198 (51%), Positives = 135/198 (68%), Gaps = 7/198 (3%)
Frame = +1
Query: 136 DLLERHRVAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRS 315
+LL++ EKCS+ CP+LD L GGIPC S+TE+VAESGSGKT P S
Sbjct: 7 NLLQKLHRRTEKCSVGCPILDRCLNGGIPCKSVTELVAESGSGKTQICLQLVLSAQLPPS 66
Query: 316 VGGLSASSLYFHSEFPFPLRRLRQLDISFCD-------AGDPLDRILVKPLHSADDLFDE 474
GGLS+SSLY H+EFPFP+RRL+QL F + DP DR+ ++ +HSAD+ D
Sbjct: 67 HGGLSSSSLYIHTEFPFPIRRLKQLSRIFISSHSELLGSSDPCDRVFLRGVHSADEFVDA 126
Query: 475 MLRLQSRLVTWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLA 654
M ++ L W + P++++V+DSIAALFRS+FEN+ DL++RSSLFFKI+G LK LA
Sbjct: 127 MPEIEFFLTYWKA-RLLPVRVIVVDSIAALFRSDFENSSLDLRKRSSLFFKISGGLKSLA 185
Query: 655 NKFGLAVVVTNHVTDVMG 708
+FGLAV+VTN V D +G
Sbjct: 186 ERFGLAVLVTNQVVDFIG 203
>ref|XP_006279666.1| hypothetical protein CARUB_v10026831mg, partial [Capsella rubella]
gi|482548370|gb|EOA12564.1| hypothetical protein
CARUB_v10026831mg, partial [Capsella rubella]
Length = 308
Score = 196 bits (499), Expect = 5e-48
Identities = 106/200 (53%), Positives = 136/200 (68%), Gaps = 9/200 (4%)
Frame = +1
Query: 133 EDLLERHRVAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPR 312
E+LL R K + C ++D L GGIPC+S+TEIVAESG GKT P
Sbjct: 13 ENLLRRSP-PNRKLTTGCEIIDVCLRGGIPCDSLTEIVAESGCGKTQLCLQLSLCAQLPI 71
Query: 313 SVGGLSASSLYFHSEFPFPLRRLRQLDISFCDAG---------DPLDRILVKPLHSADDL 465
S+GGL+ SSLY HSEFPFP RRL QL SF + +P D + V+ +HS D L
Sbjct: 72 SLGGLNGSSLYLHSEFPFPFRRLHQLSRSFHQSNPSIYANHNDNPCDHVFVQNVHSVDHL 131
Query: 466 FDEMLRLQSRLVTWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLK 645
FD M R+ NS +++P+KL+V+DS+AALFRSEF+NTP+D+++RSSLFFKI+GKLK
Sbjct: 132 FDIMPRIDG--FVGNSENRFPLKLIVLDSVAALFRSEFDNTPSDMRKRSSLFFKISGKLK 189
Query: 646 YLANKFGLAVVVTNHVTDVM 705
LANKFGLAVV+TN VTD++
Sbjct: 190 QLANKFGLAVVITNQVTDLV 209
>ref|XP_006474178.1| PREDICTED: DNA repair protein XRCC3 homolog [Citrus sinensis]
Length = 302
Score = 195 bits (496), Expect = 1e-47
Identities = 103/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%)
Frame = +1
Query: 157 VAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVGGLSAS 336
+ EKC++ CP++D L GGIPCNSITE+VAESGSGKT P S GGLSAS
Sbjct: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
Query: 337 SLYFHSEFPFPLRRLRQLDISFCDAGD--PLDRILVKPLHSADDLFDEMLRLQSRLVTWN 510
SLY H+EFPFP+RRL QL +F + D P D + V+ +HS D L D M +++S + +
Sbjct: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYVFVQSVHSVDQLLDIMPKIES-FIKNS 133
Query: 511 STHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFGLAVVVTNH 690
S + PI+L+VIDSIAALFRS+F+NT DLK+RS LFFKI+G LK +A FGLAV+VTN
Sbjct: 134 SNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
Query: 691 VTDVM 705
V D+M
Sbjct: 194 VVDLM 198
>gb|ESW11244.1| hypothetical protein PHAVU_008G013800g [Phaseolus vulgaris]
Length = 284
Score = 195 bits (496), Expect = 1e-47
Identities = 109/195 (55%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Frame = +1
Query: 139 LLERHRVAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSV 318
LL RHR +EKCS+ CPVL+ L GG+PC+SITE V ESGSGKT P S
Sbjct: 7 LLLRHR--SEKCSVGCPVLNRCLHGGVPCHSITEFVGESGSGKTQLCLQLALSAQLPSSR 64
Query: 319 GGLSASSLYFHSEFPFPLRRLRQLDISF----CDAGDPLDRILVKPLHSADDLFDEMLRL 486
GGLSASS++ H+EFPFP RRLRQL +F D DP DR+ V+ +HSA++L + +
Sbjct: 65 GGLSASSIFIHTEFPFPFRRLRQLSGAFRTLHPDLPDPCDRVFVRAVHSANELLHLIPTI 124
Query: 487 QSRLVTWNSTHKW-PIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKF 663
++ L+ S +W P+++VVIDSIAALFRS+FENT ADL+RRSSLFF I+G L+ LA +F
Sbjct: 125 ETFLL--YSRSRWRPVRIVVIDSIAALFRSDFENTGADLRRRSSLFFGISGGLRRLAKRF 182
Query: 664 GLAVVVTNHVTDVMG 708
GLAVVVTN V D +G
Sbjct: 183 GLAVVVTNQVVDFIG 197
>ref|XP_006453378.1| hypothetical protein CICLE_v10008928mg [Citrus clementina]
gi|557556604|gb|ESR66618.1| hypothetical protein
CICLE_v10008928mg [Citrus clementina]
Length = 321
Score = 195 bits (496), Expect = 1e-47
Identities = 103/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%)
Frame = +1
Query: 157 VAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVGGLSAS 336
+ EKC++ CP++D L GGIPCNSITE+VAESGSGKT P S GGLSAS
Sbjct: 34 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 93
Query: 337 SLYFHSEFPFPLRRLRQLDISFCDAGD--PLDRILVKPLHSADDLFDEMLRLQSRLVTWN 510
SLY H+EFPFP+RRL QL +F + D P D + V+ +HS D L D M +++S + +
Sbjct: 94 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYVFVQSVHSVDQLLDIMPKIES-FIKNS 152
Query: 511 STHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFGLAVVVTNH 690
S + PI+L+VIDSIAALFRS+F+NT DLK+RS LFFKI+G LK +A FGLAV+VTN
Sbjct: 153 SNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 212
Query: 691 VTDVM 705
V D+M
Sbjct: 213 VVDLM 217
>gb|EOY31825.1| X-ray repair cross complementing 3 (XRCC3) isoform 1 [Theobroma
cacao] gi|508784570|gb|EOY31826.1| X-ray repair cross
complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
gi|508784571|gb|EOY31827.1| X-ray repair cross
complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
gi|508784572|gb|EOY31828.1| X-ray repair cross
complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
gi|508784573|gb|EOY31829.1| X-ray repair cross
complementing 3 (XRCC3) isoform 1 [Theobroma cacao]
Length = 299
Score = 195 bits (496), Expect = 1e-47
Identities = 103/189 (54%), Positives = 133/189 (70%), Gaps = 8/189 (4%)
Frame = +1
Query: 166 EKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVGGLSASSLY 345
+KC+ CP+LD L GGIPC+SITEIVAESGSGKT P S GGLSAS+LY
Sbjct: 12 QKCTTGCPILDRLLRGGIPCDSITEIVAESGSGKTQICLQLSLHAQLPVSHGGLSASALY 71
Query: 346 FHSEFPFPLRRLRQLDISFCDAG--------DPLDRILVKPLHSADDLFDEMLRLQSRLV 501
H+EFPFP RRL QL +SF + +P DR+ V+ +HSAD+L + M + +S +
Sbjct: 72 LHTEFPFPFRRLHQLSLSFRSSNARHLPCNDNPCDRVYVQSVHSADELLEIMSKTESFIE 131
Query: 502 TWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFGLAVVV 681
+S + P++L+VIDSIAALFRSEF+NTP +LKRRSSLFFKI+ LK LA +F LAV++
Sbjct: 132 --SSKTQLPVRLIVIDSIAALFRSEFDNTPVELKRRSSLFFKISSMLKALARRFNLAVLL 189
Query: 682 TNHVTDVMG 708
TN V D++G
Sbjct: 190 TNQVVDMVG 198
>ref|XP_004243278.1| PREDICTED: DNA repair protein XRCC3 homolog [Solanum lycopersicum]
Length = 285
Score = 193 bits (491), Expect = 4e-47
Identities = 109/192 (56%), Positives = 129/192 (67%), Gaps = 1/192 (0%)
Frame = +1
Query: 133 EDLLER-HRVAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRP 309
EDLL+R +KC++ C VLD L GGIPCNSITE+VAESG GKT P
Sbjct: 4 EDLLQRLSPTHTQKCTVGCLVLDRLLGGGIPCNSITELVAESGCGKTQISLQLLLSAQLP 63
Query: 310 RSVGGLSASSLYFHSEFPFPLRRLRQLDISFCDAGDPLDRILVKPLHSADDLFDEMLRLQ 489
S+GGLS SS+Y +SE PFP+RRL QL SF +PL +IL PLHSA LFD + +L
Sbjct: 64 TSLGGLSGSSIYLYSESPFPVRRLHQLSSSFPTLHNPLGKILTHPLHSAHHLFDVLSQLD 123
Query: 490 SRLVTWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFGL 669
S L++ IKL+VIDSIAALFR EFEN P DLK+RS LFF+I+ KLK A +FGL
Sbjct: 124 S-LLSSRLDSPSQIKLIVIDSIAALFRFEFENNPRDLKQRSGLFFRISSKLKEQARRFGL 182
Query: 670 AVVVTNHVTDVM 705
AVVV N V DVM
Sbjct: 183 AVVVINQVVDVM 194
>ref|XP_002531657.1| X-ray repair cross complementing protein 3, xrcc3, putative
[Ricinus communis] gi|223528715|gb|EEF30727.1| X-ray
repair cross complementing protein 3, xrcc3, putative
[Ricinus communis]
Length = 301
Score = 193 bits (491), Expect = 4e-47
Identities = 109/201 (54%), Positives = 134/201 (66%), Gaps = 17/201 (8%)
Frame = +1
Query: 157 VAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVGGLSAS 336
+ +KC+L CP+LD L GGIPCNSITEIVAESG+GKT P S+GGLSAS
Sbjct: 11 IPTQKCTLGCPILDRCLNGGIPCNSITEIVAESGTGKTQLCLQLSLYAQLPLSLGGLSAS 70
Query: 337 SLYFHSEFPFPLRRLRQLDISF-----------------CDAGDPLDRILVKPLHSADDL 465
SLY H+EFPFP RRL QL SF + +P D I V + SAD L
Sbjct: 71 SLYLHTEFPFPFRRLHQLSHSFQSQHPQIFINNNNNDTINNYDNPCDNIFVHSVRSADYL 130
Query: 466 FDEMLRLQSRLVTWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLK 645
FD M +++S LV ++ TH P++L+VIDS+AALFRSEFENT DLKRRS+LFFKI+ KL+
Sbjct: 131 FDIMPKIESFLV-YSKTH-LPVRLIVIDSVAALFRSEFENTATDLKRRSALFFKISAKLR 188
Query: 646 YLANKFGLAVVVTNHVTDVMG 708
LA +F LAVVV+N V D +G
Sbjct: 189 ALAWRFNLAVVVSNQVVDFVG 209
>ref|NP_200554.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana]
gi|30696870|ref|NP_851202.1| DNA repair protein
XRCC3-like protein [Arabidopsis thaliana]
gi|55583983|sp|Q9FKM5.1|XRCC3_ARATH RecName: Full=DNA
repair protein XRCC3 homolog; AltName: Full=X-ray repair
cross-complementing protein 3 homolog; Short=AtXRCC3
gi|9758307|dbj|BAB08781.1| unnamed protein product
[Arabidopsis thaliana] gi|15425729|dbj|BAB64342.1|
AtXRCC3alpha [Arabidopsis thaliana]
gi|16444953|dbj|BAB70684.1| AtXRCC3beta [Arabidopsis
thaliana] gi|19571703|emb|CAD27641.1| Rad51B protein
[Arabidopsis thaliana] gi|19571705|emb|CAD27642.1|
Rad51B protein [Arabidopsis thaliana]
gi|20384750|gb|AAK54457.1| DNA repair protein XRCC3
[Arabidopsis thaliana] gi|109946499|gb|ABG48428.1|
At5g57450 [Arabidopsis thaliana]
gi|332009520|gb|AED96903.1| DNA repair protein
XRCC3-like protein [Arabidopsis thaliana]
gi|332009521|gb|AED96904.1| DNA repair protein
XRCC3-like protein [Arabidopsis thaliana]
Length = 304
Score = 191 bits (485), Expect = 2e-46
Identities = 105/200 (52%), Positives = 133/200 (66%), Gaps = 9/200 (4%)
Frame = +1
Query: 133 EDLLERHRVAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPR 312
E+LL R K + C +LDG L GGI C+S+TEIVAESG GKT P
Sbjct: 9 ENLLRRSPTN-RKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67
Query: 313 SVGGLSASSLYFHSEFPFPLRRLRQLDISFCDAG---------DPLDRILVKPLHSADDL 465
S GGL+ SSLY HSEFPFP RRL QL +F + +P D + V+ +HS D L
Sbjct: 68 SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127
Query: 466 FDEMLRLQSRLVTWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLK 645
FD M R+ NS ++P+KL+V+DS+AALFRSEF+NTP+DLK+RSSLFFKI+GKLK
Sbjct: 128 FDIMPRIDG--FVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLK 185
Query: 646 YLANKFGLAVVVTNHVTDVM 705
LA+KF LA+V+TN VTD++
Sbjct: 186 QLASKFDLAIVITNQVTDLV 205
>ref|XP_006401203.1| hypothetical protein EUTSA_v10015458mg [Eutrema salsugineum]
gi|557102293|gb|ESQ42656.1| hypothetical protein
EUTSA_v10015458mg [Eutrema salsugineum]
Length = 296
Score = 190 bits (483), Expect = 3e-46
Identities = 100/197 (50%), Positives = 131/197 (66%), Gaps = 9/197 (4%)
Frame = +1
Query: 142 LERHRVAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVG 321
L R + K + C ++DG L GG PCNS+TEIVAESG GKT P S G
Sbjct: 6 LGRQSPTSRKLTTGCEIIDGCLRGGFPCNSLTEIVAESGCGKTQLCLQLSLCAQLPISHG 65
Query: 322 GLSASSLYFHSEFPFPLRRLRQLDISFCDAG---------DPLDRILVKPLHSADDLFDE 474
GL S+LY HSEFPFP RRL QL SF + +P D + V+ ++S D LFD
Sbjct: 66 GLDGSALYLHSEFPFPFRRLHQLSRSFHQSNPSIYANHNDNPCDHVFVQNVNSVDHLFDI 125
Query: 475 MLRLQSRLVTWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLA 654
M R+ + N+ +++P+KL+V+DS+AALFRSEF+NTP+DL++R+SLFFKI+GKLK LA
Sbjct: 126 MPRIDA--FVGNTKNRFPLKLIVLDSVAALFRSEFDNTPSDLRKRASLFFKISGKLKQLA 183
Query: 655 NKFGLAVVVTNHVTDVM 705
N F LAVV+TN VTD++
Sbjct: 184 NNFDLAVVITNQVTDLV 200
>ref|XP_004297875.1| PREDICTED: DNA repair protein XRCC3 homolog [Fragaria vesca subsp.
vesca]
Length = 284
Score = 188 bits (477), Expect = 2e-45
Identities = 102/187 (54%), Positives = 129/187 (68%), Gaps = 6/187 (3%)
Frame = +1
Query: 166 EKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVGGLSASSLY 345
E +L CP+LDG+L GGIPCNS+TE++AES GKT P S GGLSASSL+
Sbjct: 10 ETLTLGCPILDGYLGGGIPCNSLTELIAESSCGKTQFCLQLTLFAQLPPSHGGLSASSLF 69
Query: 346 FHSEFPFPLRRLRQLDISFCDA------GDPLDRILVKPLHSADDLFDEMLRLQSRLVTW 507
HSEFPFP RRLR L SF + +P D + V+P++ A L D M ++++ LV
Sbjct: 70 LHSEFPFPFRRLRHLSGSFRSSHSDLIFTNPCDDVYVRPVNDARQLLDLMPKIET-LVAG 128
Query: 508 NSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFGLAVVVTN 687
T + P++L+VIDSIAALFRSEF N P+DLKRRS LFFKI+G L+ LA+K+G+AVVVTN
Sbjct: 129 GKT-RLPVRLIVIDSIAALFRSEFGNNPSDLKRRSFLFFKISGMLRRLASKYGVAVVVTN 187
Query: 688 HVTDVMG 708
V D MG
Sbjct: 188 QVVDFMG 194
>ref|XP_002324475.1| hypothetical protein POPTR_0018s10090g [Populus trichocarpa]
gi|222865909|gb|EEF03040.1| hypothetical protein
POPTR_0018s10090g [Populus trichocarpa]
Length = 290
Score = 187 bits (476), Expect = 2e-45
Identities = 103/188 (54%), Positives = 129/188 (68%), Gaps = 8/188 (4%)
Frame = +1
Query: 166 EKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVGGLSASSLY 345
EKCSL CP+LD + GGIPCNSITEIVAESGSGKT P +GGLSASSLY
Sbjct: 10 EKCSLGCPILDCCMGGGIPCNSITEIVAESGSGKTQLCLQLSLRAQLPPFLGGLSASSLY 69
Query: 346 FHSEFPFPLRRLRQLDIS--------FCDAGDPLDRILVKPLHSADDLFDEMLRLQSRLV 501
++EFPFP RRL QL + F DP D I ++ +++AD L D M +++S L
Sbjct: 70 LYTEFPFPTRRLHQLSSALQCQYPQIFVSNYDPCDSIFLQSVNTADQLLDIMPQVESFLE 129
Query: 502 TWNSTHKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFGLAVVV 681
NS + P++++VIDS+AALFR+EFENT +DL RRSSLFFKI+GKLK A +F L V+V
Sbjct: 130 --NSKTRLPVRVIVIDSMAALFRAEFENTASDLIRRSSLFFKISGKLKEFAKRFNLVVLV 187
Query: 682 TNHVTDVM 705
TN V DV+
Sbjct: 188 TNQVMDVV 195
>ref|XP_003551821.1| PREDICTED: DNA repair protein XRCC3 homolog [Glycine max]
Length = 288
Score = 187 bits (474), Expect = 4e-45
Identities = 102/200 (51%), Positives = 138/200 (69%), Gaps = 8/200 (4%)
Frame = +1
Query: 133 EDLLE-RHRVAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRP 309
E+LL+ +HR +KC+L CPVLD LAGG+PC S+TE V ESG GKT P
Sbjct: 4 ENLLQLQHRT--QKCTLGCPVLDRCLAGGVPCASVTEFVGESGCGKTQLCLQLALSAQLP 61
Query: 310 RSVGGLSASSLYFHSEFPFPLRRLRQLDISF------CDAGDPLDRILVKPLHSADDLFD 471
S GGLSASS++ H+EFPFP RRLR L +F DP DR+ ++ +HSA +L +
Sbjct: 62 PSHGGLSASSIFIHTEFPFPFRRLRHLSRAFRASHPDLPCSDPCDRVFLRAVHSAHELLN 121
Query: 472 EMLRLQSRLVTWNSTHKW-PIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKY 648
+ +++ L+ +S W P++++VIDSIAALFRS+FENT +DL+RRSSLFF I+G L+
Sbjct: 122 LIPTIETFLL--HSKSPWRPVRIIVIDSIAALFRSDFENTGSDLRRRSSLFFGISGGLRQ 179
Query: 649 LANKFGLAVVVTNHVTDVMG 708
LA +FG+AVVVTN V D++G
Sbjct: 180 LAKRFGIAVVVTNQVVDLIG 199
>emb|CBI17834.3| unnamed protein product [Vitis vinifera]
Length = 260
Score = 181 bits (459), Expect = 2e-43
Identities = 100/184 (54%), Positives = 116/184 (63%)
Frame = +1
Query: 157 VAAEKCSLNCPVLDGFLAGGIPCNSITEIVAESGSGKTXXXXXXXXXXXRPRSVGGLSAS 336
+ +KC+L CP+LD LAGG+PCNSITE+VAESGSGKT P S+GGL+AS
Sbjct: 13 LTTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLGGLAAS 72
Query: 337 SLYFHSEFPFPLRRLRQLDISFCDAGDPLDRILVKPLHSADDLFDEMLRLQSRLVTWNST 516
SLY HSEFPFP RRL+QL SF + L
Sbjct: 73 SLYIHSEFPFPSRRLQQLSQSFRSSYSHL------------------------------- 101
Query: 517 HKWPIKLVVIDSIAALFRSEFENTPADLKRRSSLFFKIAGKLKYLANKFGLAVVVTNHVT 696
P++L+VIDSIAALFR EFENTP DLKRRSSLFFKI+GKLK LA +FGLAVVVTN V
Sbjct: 102 ---PVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGKLKALAERFGLAVVVTNQVV 158
Query: 697 DVMG 708
D +G
Sbjct: 159 DFVG 162