BLASTX nr result
ID: Rheum21_contig00021495
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00021495
(926 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 557 e-156
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 546 e-153
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 546 e-153
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 546 e-153
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 546 e-153
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 546 e-153
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 545 e-152
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 545 e-152
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 543 e-152
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 534 e-149
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 477 e-132
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 424 e-116
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 424 e-116
ref|NP_077079.1| replicase [Clover yellow mosaic virus] 404 e-110
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 403 e-110
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A... 391 e-106
ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548... 386 e-105
gb|AFM77886.1| replicase [Hosta virus X] 378 e-102
ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CA... 378 e-102
ref|YP_002341559.1| replication-associated protein [Schlumberger... 372 e-101
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 557 bits (1435), Expect = e-156
Identities = 275/308 (89%), Positives = 283/308 (91%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA
Sbjct: 808 PGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 867
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDS HFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFS V
Sbjct: 868 VDSNHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSAPPDPPKSVMPPVTHFPV 927
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
E+ TT LDDF+E L DKFDREIFTEAHGHTNCVQ DDPTTQLFSHQQAKDEALLWETIKA
Sbjct: 928 EECTTALDDFREELHDKFDREIFTEAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETIKA 987
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RLTISTPEANIEEFRAKKDLGDILW NYHKAM LPKEQP+FSE+LWTRCAEEVQNTYLKK
Sbjct: 988 RLTISTPEANIEEFRAKKDLGDILWTNYHKAMNLPKEQPDFSEELWTRCAEEVQNTYLKK 1047
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
S+NQ+KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT
Sbjct: 1048 SLNQLKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 1107
Query: 901 MARYMRRF 924
MARYMRRF
Sbjct: 1108 MARYMRRF 1115
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 546 bits (1408), Expect = e-153
Identities = 270/308 (87%), Positives = 278/308 (90%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA
Sbjct: 820 PGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 879
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ V
Sbjct: 880 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPV 939
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
ED TTTLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI A
Sbjct: 940 EDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINA 999
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKK
Sbjct: 1000 RLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKK 1059
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
S++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT
Sbjct: 1060 SVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 1119
Query: 901 MARYMRRF 924
MARYMRRF
Sbjct: 1120 MARYMRRF 1127
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 546 bits (1408), Expect = e-153
Identities = 270/308 (87%), Positives = 278/308 (90%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA
Sbjct: 820 PGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 879
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ V
Sbjct: 880 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPV 939
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
ED TTTLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI A
Sbjct: 940 EDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINA 999
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKK
Sbjct: 1000 RLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKK 1059
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
S++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT
Sbjct: 1060 SVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 1119
Query: 901 MARYMRRF 924
MARYMRRF
Sbjct: 1120 MARYMRRF 1127
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 546 bits (1408), Expect = e-153
Identities = 270/308 (87%), Positives = 278/308 (90%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA
Sbjct: 820 PGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 879
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ V
Sbjct: 880 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPV 939
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
ED TTTLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI A
Sbjct: 940 EDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINA 999
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKK
Sbjct: 1000 RLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKK 1059
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
S++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT
Sbjct: 1060 SVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 1119
Query: 901 MARYMRRF 924
MARYMRRF
Sbjct: 1120 MARYMRRF 1127
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 546 bits (1408), Expect = e-153
Identities = 270/308 (87%), Positives = 278/308 (90%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA
Sbjct: 820 PGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 879
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ V
Sbjct: 880 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPV 939
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
ED TTTLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI A
Sbjct: 940 EDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINA 999
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKK
Sbjct: 1000 RLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKK 1059
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
S++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT
Sbjct: 1060 SVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 1119
Query: 901 MARYMRRF 924
MARYMRRF
Sbjct: 1120 MARYMRRF 1127
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 546 bits (1408), Expect = e-153
Identities = 270/308 (87%), Positives = 278/308 (90%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA
Sbjct: 820 PGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 879
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ V
Sbjct: 880 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPV 939
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
ED TTTLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI A
Sbjct: 940 EDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINA 999
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKK
Sbjct: 1000 RLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKK 1059
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
S++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT
Sbjct: 1060 SVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 1119
Query: 901 MARYMRRF 924
MARYMRRF
Sbjct: 1120 MARYMRRF 1127
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 545 bits (1403), Expect = e-152
Identities = 270/308 (87%), Positives = 276/308 (89%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA
Sbjct: 820 PGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 879
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ V
Sbjct: 880 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTATTAEAKPVAPPCTHFPV 939
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
ED TTTLDDFKE L DKFDREIF HGHTNCVQ DDPTTQLFSHQQAKDEALLWETI A
Sbjct: 940 EDGTTTLDDFKEELHDKFDREIFNPTHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINA 999
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RLTIS PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKK
Sbjct: 1000 RLTISNPEANLAEFRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWIRCAEEVQNTYLKK 1059
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
S+ QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT
Sbjct: 1060 SVAQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 1119
Query: 901 MARYMRRF 924
MARYMRRF
Sbjct: 1120 MARYMRRF 1127
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 545 bits (1403), Expect = e-152
Identities = 269/308 (87%), Positives = 277/308 (89%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA
Sbjct: 820 PGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 879
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ V
Sbjct: 880 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPV 939
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
ED TTTLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI A
Sbjct: 940 EDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINA 999
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RLT+S PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKK
Sbjct: 1000 RLTLSNPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKK 1059
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
S++QIKGGERRQSPDFHEH ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT
Sbjct: 1060 SVSQIKGGERRQSPDFHEHHILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 1119
Query: 901 MARYMRRF 924
MARYMRRF
Sbjct: 1120 MARYMRRF 1127
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 543 bits (1400), Expect = e-152
Identities = 266/308 (86%), Positives = 279/308 (90%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA
Sbjct: 151 PGLHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 210
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVRED++ EFS V
Sbjct: 211 VDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPV 270
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
ED TTTLDDF+E L DKFDREIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI A
Sbjct: 271 EDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINA 330
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RLTIS+PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKK
Sbjct: 331 RLTISSPEANLAEFRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKK 390
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
S+ QIKGG+RRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT
Sbjct: 391 SVAQIKGGDRRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 450
Query: 901 MARYMRRF 924
MARYMRRF
Sbjct: 451 MARYMRRF 458
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 534 bits (1375), Expect = e-149
Identities = 263/308 (85%), Positives = 275/308 (89%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSLMKKAAFTDAGHKVS+YAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRA
Sbjct: 825 PGLHLLVPSLMKKAAFTDAGHKVSSYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRA 884
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDSIHFVN+NAQSSAFWEKLEATPYLKTFLSLVREDKI EF V
Sbjct: 885 VDSIHFVNTNAQSSAFWEKLEATPYLKTFLSLVREDKITEFQAPADAPKPVTPPVTHFPV 944
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
E+ TTLDDFKE L DKFDREIFT GHTNCVQ DDPTTQLFSHQQAKDEALLWE I+A
Sbjct: 945 EEPATTLDDFKEELRDKFDREIFTSDRGHTNCVQTDDPTTQLFSHQQAKDEALLWEMIRA 1004
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RL ISTPEANIEEFRAKKDLGDILW NYH+AM LPKEQP+FSEDLW RCAEEVQNTYLKK
Sbjct: 1005 RLKISTPEANIEEFRAKKDLGDILWVNYHRAMGLPKEQPDFSEDLWNRCAEEVQNTYLKK 1064
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
++ Q+KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAK+IKPGQTIASFQQHAVMLYGT
Sbjct: 1065 TMAQLKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKEIKPGQTIASFQQHAVMLYGT 1124
Query: 901 MARYMRRF 924
MARYMRRF
Sbjct: 1125 MARYMRRF 1132
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 477 bits (1227), Expect = e-132
Identities = 236/308 (76%), Positives = 261/308 (84%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG+HLLVPSL+KKAAF DAGHKVSTYAGCQGITAP+VQILLD+DTTMC+ EVLYTALSRA
Sbjct: 801 PGLHLLVPSLVKKAAFADAGHKVSTYAGCQGITAPKVQILLDSDTTMCSSEVLYTALSRA 860
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
VDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVRE K+EEF+ V
Sbjct: 861 VDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVREHKLEEFTAVEDPPQEVAPPVTHFPV 920
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
E+ + TL ++SL+DK+DREI HG TNCVQ +D T QLFSHQQAKDEALLWETI A
Sbjct: 921 ENASHTLGLIQDSLADKYDREILNTNHGFTNCVQTEDLTVQLFSHQQAKDEALLWETIDA 980
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RL +STPEAN+ EF AKKDLGD+LW NYH+AMKLPKEQP+FS +LW RCA EVQ TYL K
Sbjct: 981 RLRLSTPEANLAEFHAKKDLGDVLWENYHRAMKLPKEQPDFSPELWERCAAEVQQTYLSK 1040
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
S+ QIKGGERRQSPDF E++ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGT
Sbjct: 1041 SLQQIKGGERRQSPDFPENKILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGT 1100
Query: 901 MARYMRRF 924
MARYMRR+
Sbjct: 1101 MARYMRRY 1108
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 424 bits (1091), Expect = e-116
Identities = 211/306 (68%), Positives = 238/306 (77%)
Frame = +1
Query: 7 MHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVD 186
+HLLVPSL+KK+A+ + GHKVSTYAGCQGITAP++QILLDNDT MC+KEVLYTALSRAV
Sbjct: 829 LHLLVPSLLKKSAYGEMGHKVSTYAGCQGITAPKIQILLDNDTVMCSKEVLYTALSRAVH 888
Query: 187 SIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVED 366
SIHF+N+ S+FWEKLEATPYLK FLS VRE+ I VE+
Sbjct: 889 SIHFINTGPTHSSFWEKLEATPYLKAFLSTVREEAIAAHQLPNADPRPDPEPKTHFPVEN 948
Query: 367 KTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARL 546
+ L + E + +KF+REIFTE GHTNCVQ +P QLF HQQAKDEALLWETIKARL
Sbjct: 949 TSCALGAYMEKVPEKFEREIFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARL 1008
Query: 547 TISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSI 726
TIS+PEAN EEF KKD+GDILW +Y KAM LP+E FSEDLW A EVQNTYL K +
Sbjct: 1009 TISSPEANWEEFYRKKDIGDILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPM 1068
Query: 727 NQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMA 906
N +K GERRQSPDF +HQIL+FLKSQWVKKMEKLG KIK GQTIASFQQHAVMLYGTMA
Sbjct: 1069 NMLKNGERRQSPDFEKHQILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMA 1128
Query: 907 RYMRRF 924
RYMRRF
Sbjct: 1129 RYMRRF 1134
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 424 bits (1091), Expect = e-116
Identities = 211/306 (68%), Positives = 238/306 (77%)
Frame = +1
Query: 7 MHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVD 186
+HLLVPSL+KK+A+ + GHKVSTYAGCQGITAP++QILLDNDT MC+KEVLYTALSRAV
Sbjct: 829 LHLLVPSLLKKSAYGEMGHKVSTYAGCQGITAPKIQILLDNDTVMCSKEVLYTALSRAVH 888
Query: 187 SIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVED 366
SIHF+N+ S+FWEKLEATPYLK FLS VRE+ I VE+
Sbjct: 889 SIHFINTGPTHSSFWEKLEATPYLKAFLSTVREEAIAAHQLPSADPRPDPEPKTHFPVEN 948
Query: 367 KTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARL 546
+ L + E + +KF+REIFTE GHTNCVQ +P QLF HQQAKDEALLWETIKARL
Sbjct: 949 TSCALGAYMEKVPEKFEREIFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARL 1008
Query: 547 TISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSI 726
TIS+PEAN EEF KKD+GDILW +Y KAM LP+E FSEDLW A EVQNTYL K +
Sbjct: 1009 TISSPEANWEEFYKKKDIGDILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPM 1068
Query: 727 NQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMA 906
N +K GERRQSPDF +HQIL+FLKSQWVKKMEKLG KIK GQTIASFQQHAVMLYGTMA
Sbjct: 1069 NMLKNGERRQSPDFEKHQILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMA 1128
Query: 907 RYMRRF 924
RYMRRF
Sbjct: 1129 RYMRRF 1134
>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
Length = 1670
Score = 404 bits (1039), Expect = e-110
Identities = 194/307 (63%), Positives = 238/307 (77%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
P HLLVPSL+KK ++T+ G+K STYAGCQGITA RVQ+LLD DTT+C+ +VLYTALSRA
Sbjct: 1116 PDWHLLVPSLIKKRSYTEMGYKTSTYAGCQGITADRVQVLLDTDTTLCSDQVLYTALSRA 1175
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
V ++HF+N++A SSAFW+KL +TPYLKTFLS +RED++ E V
Sbjct: 1176 VHAVHFINTSATSSAFWDKLNSTPYLKTFLSTLREDRLREEGPKPETPEEPKPATTHFPV 1235
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
E++ +L+D E L +K +RE+++ HG++NCVQ DDP QLFSHQQAKD+ LLW TI+A
Sbjct: 1236 ENENLSLEDKVEELLEKHERELYSSDHGYSNCVQTDDPVVQLFSHQQAKDQTLLWATIEA 1295
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RL IS P+AN+EEFR KK++GD+LW NY +AMKLP + EFS +LW CAEEVQ TYL K
Sbjct: 1296 RLKISNPKANMEEFRMKKNVGDVLWLNYKRAMKLPDKPIEFSHELWHACAEEVQKTYLSK 1355
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
+N IK GE RQSPDF +H I +FLKSQWVKK+EKLGA KIKPGQTIASFQQ VMLYGT
Sbjct: 1356 PLNMIKNGENRQSPDFDKHTISLFLKSQWVKKLEKLGAPKIKPGQTIASFQQATVMLYGT 1415
Query: 901 MARYMRR 921
MARYMRR
Sbjct: 1416 MARYMRR 1422
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 403 bits (1036), Expect = e-110
Identities = 206/305 (67%), Positives = 236/305 (77%)
Frame = +1
Query: 7 MHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVD 186
+HLLVPSL+KKAAF++AGHK STYAGCQGITA ++QILLD++T MC++EVLYTALSRAVD
Sbjct: 897 IHLLVPSLIKKAAFSEAGHKTSTYAGCQGITARKLQILLDSNTPMCSQEVLYTALSRAVD 956
Query: 187 SIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVED 366
SIHF+N+ SS FWEKLEATPYLKTFLS+VREDKI E+ VE+
Sbjct: 957 SIHFINTAPTSSNFWEKLEATPYLKTFLSMVREDKILEWRPKEPEPAKEEPPKTHFPVEN 1016
Query: 367 KTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARL 546
T L++F E L+ K +REIF E+HGHTNCVQ D+ Q SHQQAKDEALLWETIKARL
Sbjct: 1017 GNTILEEFTEELAQKHEREIFNESHGHTNCVQTDNKIIQTLSHQQAKDEALLWETIKARL 1076
Query: 547 TISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSI 726
IS + N EF KKD+GDILW NY +AM LP++ F E+LW A E+Q+TYL KS
Sbjct: 1077 VISHKQHNWTEFVKKKDIGDILWLNYKRAMHLPEDPIPF-EELWELAAREIQHTYLSKST 1135
Query: 727 NQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMA 906
+K GERRQSPDF E ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMA
Sbjct: 1136 QMLKNGERRQSPDFGEKDILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMA 1195
Query: 907 RYMRR 921
RYMRR
Sbjct: 1196 RYMRR 1200
>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
[Allium virus X]
Length = 1701
Score = 391 bits (1005), Expect = e-106
Identities = 193/304 (63%), Positives = 228/304 (75%)
Frame = +1
Query: 10 HLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDS 189
HLLVPS++KK + + G+K STYAGCQGITAPR+QILLD DTT+C EVLYTALSRAV
Sbjct: 1151 HLLVPSIIKKRTYMELGYKTSTYAGCQGITAPRLQILLDCDTTLCADEVLYTALSRAVHG 1210
Query: 190 IHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDK 369
IHF+N+ A S AFW+KL ATPYLKTFL RE++++E VE++
Sbjct: 1211 IHFINTGATSGAFWDKLNATPYLKTFLDFTREERLKESQPREQEPTEPEGPTTHFPVENE 1270
Query: 370 TTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLT 549
L++ E L +K DREI HGHTNCVQ +D QLFSHQQAKD+ALLW TI+ARL
Sbjct: 1271 KFVLEEQVEELLEKHDREILRPDHGHTNCVQTEDAVIQLFSHQQAKDQALLWATIEARLK 1330
Query: 550 ISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSIN 729
IS P+ANI EF AKK++GD+L+ +YH+AMKLP + F EDLW CA+EVQ TYL K IN
Sbjct: 1331 ISNPKANIAEFNAKKEIGDVLFEHYHQAMKLPDKPIPFMEDLWVACAQEVQGTYLSKPIN 1390
Query: 730 QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMAR 909
+K GE RQSPDF ++ I +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMAR
Sbjct: 1391 MLKNGEYRQSPDFDKNTIALFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMAR 1450
Query: 910 YMRR 921
YMRR
Sbjct: 1451 YMRR 1454
>ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548097|gb|AEO12140.1|
replicase [Tamus red mosaic virus]
Length = 1501
Score = 386 bits (992), Expect = e-105
Identities = 188/305 (61%), Positives = 229/305 (75%)
Frame = +1
Query: 7 MHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVD 186
+H+LVPSL++K +T+ G+K STYAGCQGITAP+VQ+LL++DTT+CT +VLYTALSRAV
Sbjct: 949 VHMLVPSLIQKKTYTELGYKTSTYAGCQGITAPKVQVLLNSDTTLCTDKVLYTALSRAVH 1008
Query: 187 SIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVED 366
SIHF+N++A S+AFW+KL ATPYLKTFLS VRE + VE+
Sbjct: 1009 SIHFINTSASSAAFWDKLNATPYLKTFLSTVREQSLASAKPREEGPTPVAAPKTHVPVEN 1068
Query: 367 KTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARL 546
L+ E L +K DREIF HGH+NCVQ D+PT QL SHQQAKD+ LLW TI+ARL
Sbjct: 1069 SNLCLEGAVEKLLEKHDREIFRADHGHSNCVQTDNPTIQLSSHQQAKDQTLLWATIEARL 1128
Query: 547 TISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSI 726
ISTPE N+ E+ K+++GD+LW +Y AM LP+E F + LW CAEEVQ TYL K +
Sbjct: 1129 KISTPERNLAEYLMKREVGDVLWLHYKNAMNLPEEPIPFEQTLWDTCAEEVQKTYLSKPM 1188
Query: 727 NQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMA 906
+ +K GE RQSPDFH++ I +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMA
Sbjct: 1189 HMLKNGELRQSPDFHKNTIALFLKSQWVKKMEKLGADKIKPGQTIASFQQAAVMLYGTMA 1248
Query: 907 RYMRR 921
RYMRR
Sbjct: 1249 RYMRR 1253
>gb|AFM77886.1| replicase [Hosta virus X]
Length = 1473
Score = 378 bits (971), Expect = e-102
Identities = 185/307 (60%), Positives = 221/307 (71%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
P MH+LVPSL+KKA + GHK STYAGCQG+T +VQI LD++TT+C+ EVLYTALSRA
Sbjct: 900 PEMHILVPSLLKKATLEELGHKCSTYAGCQGVTLSKVQIYLDSNTTLCSNEVLYTALSRA 959
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
V+ I+FVNS + FW KLEATPYLKTFL L RE+KI E + V
Sbjct: 960 VEQINFVNSGPFNGPFWAKLEATPYLKTFLRLTREEKINEITPEEPKPKEPEPPKTHFPV 1019
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
E E + +K REI+ + HGHTNCVQ D+P Q+F+HQQAKDEAL WETI+A
Sbjct: 1020 ETSAHLYSSITEEMPEKHAREIYNKTHGHTNCVQTDEPLVQMFAHQQAKDEALFWETIEA 1079
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RL I+T EAN++E K+D+GD+L+ YHKAM LPK+ F DLW CA+EVQ TYL K
Sbjct: 1080 RLRITTSEANVQELNEKRDIGDLLFHAYHKAMGLPKDPIPFENDLWETCAQEVQQTYLSK 1139
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
IN IK GE+RQ PDF ++ I++FLKSQWVKKMEKLGA IKPGQTIASF Q VMLYGT
Sbjct: 1140 PINLIKNGEKRQGPDFDKNAIMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGT 1199
Query: 901 MARYMRR 921
MARYMRR
Sbjct: 1200 MARYMRR 1206
>ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CAF04078.1| replicase
[Hosta virus X]
Length = 1507
Score = 378 bits (971), Expect = e-102
Identities = 185/307 (60%), Positives = 221/307 (71%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
P MH+LVPSL+KKA + GHK STYAGCQG+T +VQI LD++TT+C+ EVLYTALSRA
Sbjct: 934 PEMHILVPSLLKKATLEELGHKCSTYAGCQGVTLSKVQIYLDSNTTLCSNEVLYTALSRA 993
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
V+ I+FVNS + FW KLEATPYLKTFL L RE+KI E + V
Sbjct: 994 VEQINFVNSGPFNGPFWAKLEATPYLKTFLRLTREEKINEITPEEPKPKEPEPPKTHFPV 1053
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
E E + +K REI+ + HGHTNCVQ D+P Q+F+HQQAKDEAL WETI+A
Sbjct: 1054 ETSAHLYSSITEEMPEKHAREIYNKTHGHTNCVQTDEPLVQMFAHQQAKDEALFWETIEA 1113
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RL I+T EAN++E K+D+GD+L+ YHKAM LPK+ F DLW CA+EVQ TYL K
Sbjct: 1114 RLRITTSEANVQELNEKRDIGDLLFHAYHKAMGLPKDPIPFENDLWETCAQEVQQTYLSK 1173
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
IN IK GE+RQ PDF ++ I++FLKSQWVKKMEKLGA IKPGQTIASF Q VMLYGT
Sbjct: 1174 PINLIKNGEKRQGPDFDKNAIMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGT 1233
Query: 901 MARYMRR 921
MARYMRR
Sbjct: 1234 MARYMRR 1240
>ref|YP_002341559.1| replication-associated protein [Schlumbergera virus X]
gi|217316801|gb|AAR11537.2| replication-associated
protein [Schlumbergera virus X]
Length = 1545
Score = 372 bits (956), Expect = e-101
Identities = 182/307 (59%), Positives = 221/307 (71%)
Frame = +1
Query: 1 PGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRA 180
PG HLLVPS+ KK A+ + GHKVSTYAGCQGITAP +QIL+DNDT MC+++V+YTALSRA
Sbjct: 990 PGRHLLVPSMYKKQAYGEMGHKVSTYAGCQGITAPEIQILIDNDTPMCSQQVMYTALSRA 1049
Query: 181 VDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXV 360
V +IHFVN+ + AFWEKL ATPYL FL LVRE+K + S V
Sbjct: 1050 VHAIHFVNTGVTNDAFWEKLAATPYLAAFLRLVREEKTRQPSPTEDPPAQPPAPETHFPV 1109
Query: 361 EDKTTTLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKA 540
E+ D E++ DK RE+F+E GH+NCVQ +DP Q+F HQQA+DE L W TI+A
Sbjct: 1110 ENPKNFFDKIIENMPDKHSRELFSEKDGHSNCVQTEDPIVQMFPHQQARDETLFWATIEA 1169
Query: 541 RLTISTPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKK 720
RL +S+PE N EEF +K+ +GD+L+ NY AM LPKE +F E LW CA+EVQ TYL K
Sbjct: 1170 RLKVSSPEKNFEEFVSKRHIGDVLFENYKLAMGLPKEPIQFDEGLWNVCADEVQRTYLSK 1229
Query: 721 SINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGT 900
++ +K GE RQSPDF I +FLKSQWVKK+EKLG +IK GQTIASFQQ AVMLYGT
Sbjct: 1230 PLHMLKNGEGRQSPDFDPKTIALFLKSQWVKKVEKLGQPRIKAGQTIASFQQEAVMLYGT 1289
Query: 901 MARYMRR 921
MARYMRR
Sbjct: 1290 MARYMRR 1296