BLASTX nr result
ID: Rheum21_contig00021289
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00021289
(533 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBJ20753.1| hypothetical protein [Beta vulgaris subsp. marit... 108 7e-22
ref|YP_004222329.1| hypothetical protein BevumaM_p095 [Beta vulg... 108 7e-22
emb|CBI18825.3| unnamed protein product [Vitis vinifera] 80 3e-13
ref|YP_008992318.1| hypothetical protein Salmi_Mp054 (mitochondr... 79 6e-13
gb|AGC78959.1| NADH dehydrogenase subunit 3 (mitochondrion) [Vic... 79 6e-13
ref|XP_003588263.1| NADH-ubiquinone oxidoreductase chain [Medica... 79 6e-13
gb|AGC78988.1| hypothetical protein (mitochondrion) [Vicia faba] 75 7e-12
gb|AGC78961.1| OR338 (mitochondrion) [Vicia faba] 75 7e-12
gb|AAM15514.1| hypothetical protein [Arabidopsis thaliana] 72 8e-11
sp|P16265.3|NU3M_MAIZE RecName: Full=NADH-ubiquinone oxidoreduct... 65 7e-09
ref|YP_008999594.1| NADH dehydrogenase subunit 3 (mitochondrion)... 65 7e-09
gb|AAF86498.1|AF279451_1 NADH dehydrogenase subunit 3 [Lupinus a... 65 7e-09
ref|YP_003587376.1| NADH dehydrogenase subunit 3 [Cucurbita pepo... 65 7e-09
ref|YP_003587240.1| NADH dehydrogenase subunit 3 [Citrullus lana... 65 7e-09
ref|YP_005090499.1| NADH dehydrogenase subunit 3 (mitochondrion)... 65 7e-09
ref|YP_005090461.1| NADH dehydrogenase subunit 3 (mitochondrion)... 65 7e-09
dbj|BAD83443.2| NADH dehydrogenase subunit 3 (mitochondrion) [Ni... 65 7e-09
ref|YP_588354.1| NADH dehydrogenase subunit 3 [Zea mays subsp. m... 65 7e-09
emb|CAC48165.1| NADH dehydrogenase subunit 3 [Daucus carota] 64 2e-08
gb|AFI44267.1| NADH dehydrogenase subunit 3 (mitochondrion) [Sil... 64 2e-08
>emb|CBJ20753.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 227
Score = 108 bits (270), Expect = 7e-22
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 531 VVDLVYQQAEIERHIEACLIADGIPVGSLQQNVNGLRSVLFSPQGTLLSRATLARYLLEI 352
+VDLVYQQAEIE+ IEA LI DGI +N LR LF P G +S ATLARY+ EI
Sbjct: 135 IVDLVYQQAEIEKKIEASLILDGISPTLFFSELNRLRGFLFYPHGAPISAATLARYIREI 194
Query: 351 TRNGTRQSIPYRRVYRAIRNYDLF 280
+NGTRQSIPYRRVYRAIRNY+LF
Sbjct: 195 AQNGTRQSIPYRRVYRAIRNYELF 218
>ref|YP_004222329.1| hypothetical protein BevumaM_p095 [Beta vulgaris subsp. maritima]
gi|346683203|ref|YP_004842135.1| hypothetical protein
BemaM_p091 [Beta macrocarpa]
gi|317905665|emb|CBX33231.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439844|emb|CBX33304.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|345500121|emb|CBX24940.1| hypothetical protein [Beta
macrocarpa] gi|384939133|emb|CBL51979.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 227
Score = 108 bits (270), Expect = 7e-22
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 531 VVDLVYQQAEIERHIEACLIADGIPVGSLQQNVNGLRSVLFSPQGTLLSRATLARYLLEI 352
+VDLVYQQAEIE+ IEA LI DGI +N LR LF P G +S ATLARY+ EI
Sbjct: 135 IVDLVYQQAEIEKKIEASLILDGISPTLFFSELNRLRGFLFYPHGAPISAATLARYIREI 194
Query: 351 TRNGTRQSIPYRRVYRAIRNYDLF 280
+NGTRQSIPYRRVYRAIRNY+LF
Sbjct: 195 AQNGTRQSIPYRRVYRAIRNYELF 218
>emb|CBI18825.3| unnamed protein product [Vitis vinifera]
Length = 142
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/61 (65%), Positives = 41/61 (67%)
Frame = -1
Query: 185 SERTKWAVVMLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGD 6
SERTKWA+VM EFAPICIY SNSSTYPEKLSAYECGFDPFGD
Sbjct: 26 SERTKWAMVMSEFAPICIYLVISPLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPFGD 85
Query: 5 A 3
A
Sbjct: 86 A 86
>ref|YP_008992318.1| hypothetical protein Salmi_Mp054 (mitochondrion) [Salvia
miltiorrhiza] gi|534292291|gb|AGU16583.1| hypothetical
protein Salmi_Mp054 (mitochondrion) [Salvia
miltiorrhiza]
Length = 182
Score = 79.0 bits (193), Expect = 6e-13
Identities = 35/84 (41%), Positives = 58/84 (69%)
Frame = -3
Query: 528 VDLVYQQAEIERHIEACLIADGIPVGSLQQNVNGLRSVLFSPQGTLLSRATLARYLLEIT 349
++++++Q +E+ IEA L+ DG P + + + +R LF P+GT L+ TL ++L +I
Sbjct: 75 LNILFKQVTLEKKIEAALVDDGYPRERVLEKRHAIRGFLFYPRGTALTERTLTQHLEQIE 134
Query: 348 RNGTRQSIPYRRVYRAIRNYDLFI 277
RNGTR S+PYRR+ RA+ N+DL +
Sbjct: 135 RNGTRASVPYRRIGRAVENHDLLL 158
>gb|AGC78959.1| NADH dehydrogenase subunit 3 (mitochondrion) [Vicia faba]
Length = 149
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/61 (65%), Positives = 40/61 (65%)
Frame = -1
Query: 185 SERTKWAVVMLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGD 6
SERTKW VVM EFAPICIY SNSSTYPEKLSAYECGFDPFGD
Sbjct: 23 SERTKWFVVMSEFAPICIYLVISLLVSLILLGLPFPFASNSSTYPEKLSAYECGFDPFGD 82
Query: 5 A 3
A
Sbjct: 83 A 83
>ref|XP_003588263.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477311|gb|AES58514.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
Length = 362
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/61 (65%), Positives = 40/61 (65%)
Frame = -1
Query: 185 SERTKWAVVMLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGD 6
SERTKW VVM EFAPICIY SNSSTYPEKLSAYECGFDPFGD
Sbjct: 108 SERTKWFVVMSEFAPICIYLVISLLVSLILLGLPFPFASNSSTYPEKLSAYECGFDPFGD 167
Query: 5 A 3
A
Sbjct: 168 A 168
>gb|AGC78988.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 284
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = -3
Query: 519 VYQQAEIERHIEACLIADGIPVGSLQQNVNGLRSVLFSPQGTLLSRATLARYLLEITRNG 340
V Q IERH+EA L+ADG + + + +R LF P+G L T A YL +I G
Sbjct: 203 VQSQLSIERHVEAALVADGYSPQVVFERRHTIRGFLFYPEGHALQGGTYAGYLSQIANFG 262
Query: 339 TRQSIPYRRVYRAIRNYDLFID 274
TRQS+PY+RV R++RN LF+D
Sbjct: 263 TRQSVPYQRVIRSVRNSHLFLD 284
>gb|AGC78961.1| OR338 (mitochondrion) [Vicia faba]
Length = 338
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = -3
Query: 519 VYQQAEIERHIEACLIADGIPVGSLQQNVNGLRSVLFSPQGTLLSRATLARYLLEITRNG 340
V Q IERH+EA L+ADG + + + +R LF P+G L T A YL +I G
Sbjct: 257 VQSQLSIERHVEAALVADGYSPQVVFERRHTIRGFLFYPEGHALQGGTYAGYLSQIANFG 316
Query: 339 TRQSIPYRRVYRAIRNYDLFID 274
TRQS+PY+RV R++RN LF+D
Sbjct: 317 TRQSVPYQRVIRSVRNSHLFLD 338
>gb|AAM15514.1| hypothetical protein [Arabidopsis thaliana]
Length = 477
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/61 (60%), Positives = 39/61 (63%)
Frame = -1
Query: 185 SERTKWAVVMLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGD 6
SE+TKWAV+M EFAPI IY SNSSTYPEKLSAYECGFDP GD
Sbjct: 351 SEKTKWAVMMSEFAPISIYLVISLLVSLILLGVPFPFASNSSTYPEKLSAYECGFDPSGD 410
Query: 5 A 3
A
Sbjct: 411 A 411
>sp|P16265.3|NU3M_MAIZE RecName: Full=NADH-ubiquinone oxidoreductase chain 3; AltName:
Full=NADH dehydrogenase subunit 3
Length = 118
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/52 (63%), Positives = 33/52 (63%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY SNSSTYPEKLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDA 52
>ref|YP_008999594.1| NADH dehydrogenase subunit 3 (mitochondrion) [Vaccinium
macrocarpon] gi|549531669|gb|AGX28808.1| NADH
dehydrogenase subunit 3 (mitochondrion) [Vaccinium
macrocarpon]
Length = 118
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/52 (63%), Positives = 33/52 (63%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY SNSSTYPEKLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLILLGVPFLFSSNSSTYPEKLSAYECGFDPFGDA 52
>gb|AAF86498.1|AF279451_1 NADH dehydrogenase subunit 3 [Lupinus albus]
Length = 118
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/52 (63%), Positives = 33/52 (63%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY SNSSTYPEKLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLILLGLPFLFASNSSTYPEKLSAYECGFDPFGDA 52
>ref|YP_003587376.1| NADH dehydrogenase subunit 3 [Cucurbita pepo]
gi|9280618|gb|AAF86497.1|AF279450_1 NADH dehydrogenase
subunit 3 [Lupinus luteus]
gi|9280622|gb|AAF86499.1|AF279452_1 NADH dehydrogenase
subunit 3 [Lupinus angustifolius]
gi|259156818|gb|ACV96679.1| NADH dehydrogenase subunit 3
[Cucurbita pepo]
Length = 118
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/52 (63%), Positives = 33/52 (63%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY SNSSTYPEKLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLILLGLPFLFASNSSTYPEKLSAYECGFDPFGDA 52
>ref|YP_003587240.1| NADH dehydrogenase subunit 3 [Citrullus lanatus]
gi|38605649|sp|P60159.1|NU3M_HELAN RecName:
Full=NADH-ubiquinone oxidoreductase chain 3; AltName:
Full=NADH dehydrogenase subunit 3
gi|38605650|sp|P60160.1|NU3M_WHEAT RecName:
Full=NADH-ubiquinone oxidoreductase chain 3; AltName:
Full=NADH dehydrogenase subunit 3
gi|1518350|emb|CAA89856.1| NADH dehydrogenase subunit 3
[Helianthus annuus] gi|259156772|gb|ACV96634.1| NADH
dehydrogenase subunit 3 [Citrullus lanatus]
Length = 118
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/52 (63%), Positives = 33/52 (63%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY SNSSTYPEKLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDA 52
>ref|YP_005090499.1| NADH dehydrogenase subunit 3 (mitochondrion) [Lotus japonicus]
gi|357197363|gb|AET62959.1| NADH dehydrogenase subunit 3
(mitochondrion) [Lotus japonicus]
Length = 118
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/52 (63%), Positives = 33/52 (63%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY SNSSTYPEKLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLILLGLPFLLASNSSTYPEKLSAYECGFDPFGDA 52
>ref|YP_005090461.1| NADH dehydrogenase subunit 3 (mitochondrion) [Millettia pinnata]
gi|357197324|gb|AET62921.1| NADH dehydrogenase subunit 3
(mitochondrion) [Millettia pinnata]
Length = 118
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/52 (63%), Positives = 33/52 (63%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY SNSSTYPEKLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLILLGLPFLFASNSSTYPEKLSAYECGFDPFGDA 52
>dbj|BAD83443.2| NADH dehydrogenase subunit 3 (mitochondrion) [Nicotiana tabacum]
Length = 118
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/52 (63%), Positives = 33/52 (63%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY SNSSTYPEKLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLLLLGLPFLFSSNSSTYPEKLSAYECGFDPFGDA 52
>ref|YP_588354.1| NADH dehydrogenase subunit 3 [Zea mays subsp. mays]
gi|40795083|gb|AAR91127.1| NADH dehydrogenase subunit 3
(mitochondrion) [Zea mays]
Length = 118
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/52 (63%), Positives = 33/52 (63%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY SNSSTYPEKLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDA 52
>emb|CAC48165.1| NADH dehydrogenase subunit 3 [Daucus carota]
Length = 118
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY NSSTYP+KLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLILLGVPFLFAFNSSTYPDKLSAYECGFDPFGDA 52
>gb|AFI44267.1| NADH dehydrogenase subunit 3 (mitochondrion) [Silene vulgaris]
Length = 118
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/52 (61%), Positives = 33/52 (63%)
Frame = -1
Query: 158 MLEFAPICIYXXXXXXXXXXXXXXXXXXXSNSSTYPEKLSAYECGFDPFGDA 3
MLEFAPICIY SN+STYPEKLSAYECGFDPFGDA
Sbjct: 1 MLEFAPICIYLVISLLVSLIPLGLPFPFSSNTSTYPEKLSAYECGFDPFGDA 52