BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020963
         (265 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB40470.1| hypothetical protein L484_013773 [Morus notabilis]      63   5e-08
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...    63   5e-08
ref|XP_004246249.1| PREDICTED: mediator of RNA polymerase II tra...    62   1e-07
ref|XP_004246248.1| PREDICTED: mediator of RNA polymerase II tra...    62   1e-07
gb|EMJ00680.1| hypothetical protein PRUPE_ppb009396mg [Prunus pe...    61   1e-07
ref|XP_006344343.1| PREDICTED: mediator of RNA polymerase II tra...    60   3e-07
ref|XP_006344342.1| PREDICTED: mediator of RNA polymerase II tra...    60   3e-07
ref|XP_006344340.1| PREDICTED: mediator of RNA polymerase II tra...    60   3e-07
ref|XP_002312859.2| hypothetical protein POPTR_0009s15800g [Popu...    59   5e-07
ref|XP_006366811.1| PREDICTED: mediator of RNA polymerase II tra...    59   7e-07
gb|EOX93676.1| Mediator of RNA polymerase II transcription subun...    59   7e-07
ref|XP_004242462.1| PREDICTED: mediator of RNA polymerase II tra...    59   7e-07
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...    59   7e-07
ref|XP_006469363.1| PREDICTED: mediator of RNA polymerase II tra...    59   9e-07
ref|NP_001067267.1| Os12g0614000 [Oryza sativa Japonica Group] g...    59   9e-07
gb|ABG22085.1| expressed protein [Oryza sativa Japonica Group] g...    59   9e-07
gb|ABG22086.1| expressed protein [Oryza sativa Japonica Group]         59   9e-07
ref|XP_003548527.1| PREDICTED: mediator of RNA polymerase II tra...    58   2e-06
ref|XP_002274797.2| PREDICTED: uncharacterized protein LOC100251...    57   2e-06
emb|CBI38298.3| unnamed protein product [Vitis vinifera]               57   2e-06

>gb|EXB40470.1| hypothetical protein L484_013773 [Morus notabilis]
          Length = 219

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRET  ++LPP EKG  TIA K K+EFKD +                          
Sbjct: 94  AFQLRETGPIDLPPAEKGILTIAGKSKSEFKDKERKHKKHKDRDKEKDKEHKKHKHHHKD 153

Query: 182 H--NIDKENKNHKSAHQESGADYIKKHNEK 265
              + DK+ K  KS H +SGAD+ KKH+EK
Sbjct: 154 RSKDKDKDKKKDKSGHHDSGADHTKKHHEK 183


>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/90 (41%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRET  V+LP  EKG PTI  K K+E KD D                          
Sbjct: 94  AFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKD 153

Query: 182 H--NIDKENKNHKSAHQESGADYIKKHNEK 265
              + DK+ K  KS HQ+SGAD+ KKH+EK
Sbjct: 154 RSKDKDKDKKKEKSGHQDSGADHSKKHHEK 183


>ref|XP_004246249.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform 2 [Solanum lycopersicum]
          Length = 186

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRE A V+LPP EKG PT+A K K+E KD +                          
Sbjct: 94  AFRLREAAPVDLPPSEKGIPTVAGKSKSESKDKEKKHKKHKDKDKEKDKEHKKHKHRHKD 153

Query: 182 H--NIDKENKNHKSAHQESGADYIKKHNEK 265
              + DK+ K  KS H +SGAD  KKH+EK
Sbjct: 154 RSKDKDKDKKRDKSVHHDSGADLSKKHHEK 183


>ref|XP_004246248.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform 1 [Solanum lycopersicum]
          Length = 218

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRE A V+LPP EKG PT+A K K+E KD +                          
Sbjct: 94  AFRLREAAPVDLPPSEKGIPTVAGKSKSESKDKEKKHKKHKDKDKEKDKEHKKHKHRHKD 153

Query: 182 H--NIDKENKNHKSAHQESGADYIKKHNEK 265
              + DK+ K  KS H +SGAD  KKH+EK
Sbjct: 154 RSKDKDKDKKRDKSVHHDSGADLSKKHHEK 183


>gb|EMJ00680.1| hypothetical protein PRUPE_ppb009396mg [Prunus persica]
          Length = 217

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AFHLRETA ++LP  +KG PTIA K K+E KD +                          
Sbjct: 92  AFHLRETAPIDLPLADKGIPTIAAKSKSESKDKEKKHKKHKDRDKEKDKEHKKHKRRHKD 151

Query: 182 H--NIDKENKNHKSAHQESGADYIKKHNEK 265
              + DKE K  KS H ES  D+ KKH+EK
Sbjct: 152 RSKDKDKEKKKEKSGHHESTGDHSKKHHEK 181


>ref|XP_006344343.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform X4 [Solanum tuberosum]
          Length = 218

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
 Frame = +2

Query: 5   FHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXXH 184
           F LRE A V+LPP EKG PT+A K K+E KD +                           
Sbjct: 95  FRLREAAPVDLPPSEKGIPTVAGKSKSESKDKEKKHKKHKDKDKEKDKEHKKHKHRHKDR 154

Query: 185 --NIDKENKNHKSAHQESGADYIKKHNEK 265
             + DK+ K  KS H +SGAD  KKH+EK
Sbjct: 155 SKDKDKDKKRDKSVHHDSGADLSKKHHEK 183


>ref|XP_006344342.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform X3 [Solanum tuberosum]
          Length = 219

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
 Frame = +2

Query: 5   FHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXXH 184
           F LRE A V+LPP EKG PT+A K K+E KD +                           
Sbjct: 95  FRLREAAPVDLPPSEKGIPTVAGKSKSESKDKEKKHKKHKDKDKEKDKEHKKHKHRHKDR 154

Query: 185 --NIDKENKNHKSAHQESGADYIKKHNEK 265
             + DK+ K  KS H +SGAD  KKH+EK
Sbjct: 155 SKDKDKDKKRDKSVHHDSGADLSKKHHEK 183


>ref|XP_006344340.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform X1 [Solanum tuberosum]
           gi|565354889|ref|XP_006344341.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like isoform
           X2 [Solanum tuberosum]
          Length = 220

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
 Frame = +2

Query: 5   FHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXXH 184
           F LRE A V+LPP EKG PT+A K K+E KD +                           
Sbjct: 95  FRLREAAPVDLPPSEKGIPTVAGKSKSESKDKEKKHKKHKDKDKEKDKEHKKHKHRHKDR 154

Query: 185 --NIDKENKNHKSAHQESGADYIKKHNEK 265
             + DK+ K  KS H +SGAD  KKH+EK
Sbjct: 155 SKDKDKDKKRDKSVHHDSGADLSKKHHEK 183


>ref|XP_002312859.2| hypothetical protein POPTR_0009s15800g [Populus trichocarpa]
           gi|550331827|gb|EEE86814.2| hypothetical protein
           POPTR_0009s15800g [Populus trichocarpa]
          Length = 218

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/92 (38%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDND----MXXXXXXXXXXXXXXXXXXXXX 169
           AF L+ET  ++LP  EKG PTIA K K E KD D                          
Sbjct: 91  AFQLKETTPIDLPSAEKGTPTIAGKSKGESKDKDRKHKKQKDRDKEKDKEHKKHKRRHKD 150

Query: 170 XXXXHNIDKENKNHKSAHQESGADYIKKHNEK 265
                + DKE K  +S H +SGAD+ KKH+EK
Sbjct: 151 KDRSKDKDKEKKKDRSGHHDSGADHSKKHHEK 182


>ref|XP_006366811.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform X1 [Solanum tuberosum]
           gi|565402703|ref|XP_006366812.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like isoform
           X2 [Solanum tuberosum]
          Length = 220

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRETA V L P +KG PTIA K K+E KD +                          
Sbjct: 94  AFQLRETAPVNLSPSDKGTPTIAGKSKSEMKDKEKKEKKHKKHKDKDKEKDKEHKKHKHR 153

Query: 182 H-----NIDKENKNHKSAHQESGADYIKKHNEK 265
           H     + DKE K  KS H + GA++ KKH +K
Sbjct: 154 HKDRSKDKDKEKKKDKSGHNDPGAEHSKKHEKK 186


>gb|EOX93676.1| Mediator of RNA polymerase II transcription subunit 19 [Theobroma
           cacao]
          Length = 221

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/92 (39%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDND----MXXXXXXXXXXXXXXXXXXXXX 169
           AF LRE+  VELP  EKG PTIA K K+E KD +                          
Sbjct: 94  AFQLRESTPVELPSSEKGIPTIAGKSKSEAKDKERKHKKHKDRDKEKDKEHKRHKHRHKD 153

Query: 170 XXXXHNIDKENKNHKSAHQESGADYIKKHNEK 265
                + DKE K  +S H +SGAD+ KKH+EK
Sbjct: 154 KDRTKDKDKEKKKDRSGHHDSGADHSKKHHEK 185


>ref|XP_004242462.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Solanum lycopersicum]
          Length = 220

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRETA V L P +KG PTIA K K+E KD +                          
Sbjct: 94  AFQLRETAPVNLSPSDKGTPTIAGKSKSEMKDKEKKEKKHKKHKDKDKEKDKEHKKHKHR 153

Query: 182 H-----NIDKENKNHKSAHQESGADYIKKHNEK 265
           H     + DKE K  KS H + GA++ KKH +K
Sbjct: 154 HKDRSKDKDKEKKKDKSGHNDPGAEHSKKHEKK 186


>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDND----MXXXXXXXXXXXXXXXXXXXXX 169
           AF L+ET  ++LPP EKG PTIA K K+E KD +                          
Sbjct: 94  AFQLKETTPIDLPPAEKGTPTIAAKSKSESKDKERKHKKHKDKDKKEDKEHKKHKHRHKD 153

Query: 170 XXXXHNIDKENKNHKSAHQESGADYIKKHNEK 265
                + DKE K  +S H +SG D+ KKH++K
Sbjct: 154 KDRSKDKDKEKKKDRSGHHDSGGDHSKKHHDK 185


>ref|XP_006469363.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform X1 [Citrus sinensis]
           gi|568830137|ref|XP_006469364.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like isoform
           X2 [Citrus sinensis] gi|568830139|ref|XP_006469365.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 19a-like isoform X3 [Citrus sinensis]
           gi|568830141|ref|XP_006469366.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like isoform
           X4 [Citrus sinensis]
          Length = 219

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRET+ V+LPP EKG PT+A K K+E KD +                          
Sbjct: 92  AFQLRETSPVDLPPAEKGVPTLAGKSKSESKDKERKHKKHKDKDKEKDREHKKHKHRHKD 151

Query: 182 H----NIDKENKNHKSAHQESGADYIKKHNEK 265
                + DK+ K  KS H +S AD  KKH+EK
Sbjct: 152 RSKDKDKDKDKKKDKSGHHDSSADPSKKHHEK 183


>ref|NP_001067267.1| Os12g0614000 [Oryza sativa Japonica Group]
           gi|113649774|dbj|BAF30286.1| Os12g0614000, partial
           [Oryza sativa Japonica Group]
          Length = 231

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/94 (37%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRETA V+LP  EKG PTI+ K K+E KD +                          
Sbjct: 104 AFQLRETAPVDLPSAEKGIPTISGKLKSESKDKEKKHKKHKDKDRDKDKEHKKHKHRHKD 163

Query: 182 H------NIDKENKNHKSAHQESGADYIKKHNEK 265
                  + DK+ K  KS H +SG D+ KKH+EK
Sbjct: 164 RSKDKDKDKDKDKKKDKSGHHDSGGDHSKKHHEK 197


>gb|ABG22085.1| expressed protein [Oryza sativa Japonica Group]
           gi|215697083|dbj|BAG91077.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222617473|gb|EEE53605.1| hypothetical protein
           OsJ_36861 [Oryza sativa Japonica Group]
          Length = 220

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/94 (37%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRETA V+LP  EKG PTI+ K K+E KD +                          
Sbjct: 93  AFQLRETAPVDLPSAEKGIPTISGKLKSESKDKEKKHKKHKDKDRDKDKEHKKHKHRHKD 152

Query: 182 H------NIDKENKNHKSAHQESGADYIKKHNEK 265
                  + DK+ K  KS H +SG D+ KKH+EK
Sbjct: 153 RSKDKDKDKDKDKKKDKSGHHDSGGDHSKKHHEK 186


>gb|ABG22086.1| expressed protein [Oryza sativa Japonica Group]
          Length = 211

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/94 (37%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRETA V+LP  EKG PTI+ K K+E KD +                          
Sbjct: 93  AFQLRETAPVDLPSAEKGIPTISGKLKSESKDKEKKHKKHKDKDRDKDKEHKKHKHRHKD 152

Query: 182 H------NIDKENKNHKSAHQESGADYIKKHNEK 265
                  + DK+ K  KS H +SG D+ KKH+EK
Sbjct: 153 RSKDKDKDKDKDKKKDKSGHHDSGGDHSKKHHEK 186


>ref|XP_003548527.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
           isoform X1 [Glycine max]
           gi|571525134|ref|XP_006598920.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a isoform X2
           [Glycine max] gi|571525137|ref|XP_006598921.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 19a isoform X3 [Glycine max]
          Length = 222

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRETA ++LP  EKG PTIA K K+E KD +                          
Sbjct: 93  AFQLRETAPIDLPAAEKGIPTIAGKSKSENKDKEKKHKKHKDKDKDKDREHKKHKHRHKD 152

Query: 182 HNIDK------ENKNHKSAHQESGADYIKKHNEK 265
            + DK      + K  KS H++S AD+ KKH+EK
Sbjct: 153 RSKDKDKDKDRDKKKDKSGHRDSSADHSKKHHEK 186


>ref|XP_002274797.2| PREDICTED: uncharacterized protein LOC100251197 [Vitis vinifera]
          Length = 194

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/91 (39%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRETA ++LPP EKG PTIA K K+E KD +                          
Sbjct: 71  AFQLRETAPIDLPPAEKGIPTIAGKSKSESKDKE---RKHKKHKDRDKEKDKEHKKHKHR 127

Query: 182 HNIDKE---NKNHKSAHQESGADYIKKHNEK 265
           HN  KE    K  +S   +S AD+ KKH+EK
Sbjct: 128 HNRSKEKDKEKKDRSGQHDSAADHSKKHHEK 158


>emb|CBI38298.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/91 (39%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   AFHLRETARVELPPGEKGAPTIAEKFKNEFKDNDMXXXXXXXXXXXXXXXXXXXXXXXXX 181
           AF LRETA ++LPP EKG PTIA K K+E KD +                          
Sbjct: 81  AFQLRETAPIDLPPAEKGIPTIAGKSKSESKDKE---RKHKKHKDRDKEKDKEHKKHKHR 137

Query: 182 HNIDKE---NKNHKSAHQESGADYIKKHNEK 265
           HN  KE    K  +S   +S AD+ KKH+EK
Sbjct: 138 HNRSKEKDKEKKDRSGQHDSAADHSKKHHEK 168