BLASTX nr result

ID: Rheum21_contig00020933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020933
         (236 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345727.1| PREDICTED: uncharacterized protein LOC102584...    64   2e-08
ref|XP_006339291.1| PREDICTED: uncharacterized protein LOC102602...    64   2e-08
ref|XP_004246722.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...    64   3e-08
ref|XP_004302822.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    63   4e-08
ref|XP_006428951.1| hypothetical protein CICLE_v10012410mg [Citr...    61   1e-07
gb|EXB58572.1| E3 ubiquitin-protein ligase RING1-like protein [M...    59   7e-07
ref|XP_004249512.1| PREDICTED: uncharacterized protein LOC101254...    59   9e-07
ref|XP_004137953.1| PREDICTED: uncharacterized protein LOC101209...    56   4e-06

>ref|XP_006345727.1| PREDICTED: uncharacterized protein LOC102584058 [Solanum tuberosum]
          Length = 289

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/69 (44%), Positives = 42/69 (60%)
 Frame = -3

Query: 234 AVLVLLLFCELRQHDPIALETTSPQDWHRVLAAYYCDNVLSLSGVKVSPNEVVRALVDVV 55
           AVL+LLL CELRQHDP AL+   P  W  V+  Y   + L  S +  S  EV+   +D++
Sbjct: 108 AVLLLLLLCELRQHDPEALDLP-PSRWRVVICQYIAKDALKFSSISCSNREVIMKFIDML 166

Query: 54  AKCRRFVGS 28
           AKC+ FV +
Sbjct: 167 AKCKNFVNA 175


>ref|XP_006339291.1| PREDICTED: uncharacterized protein LOC102602984 [Solanum tuberosum]
          Length = 296

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/67 (44%), Positives = 43/67 (64%)
 Frame = -3

Query: 234 AVLVLLLFCELRQHDPIALETTSPQDWHRVLAAYYCDNVLSLSGVKVSPNEVVRALVDVV 55
           AVL+LLL CELRQH+P AL       W  +L  Y   ++L LSG++   +EV+   +++V
Sbjct: 108 AVLMLLLLCELRQHEPGALHNAPLSCWRNILRDYMAKDMLKLSGIESCCSEVIIKFIELV 167

Query: 54  AKCRRFV 34
           AKC+ FV
Sbjct: 168 AKCKNFV 174


>ref|XP_004246722.1| PREDICTED: E3 ubiquitin-protein ligase RNF149-like [Solanum
           lycopersicum]
          Length = 293

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/67 (44%), Positives = 41/67 (61%)
 Frame = -3

Query: 234 AVLVLLLFCELRQHDPIALETTSPQDWHRVLAAYYCDNVLSLSGVKVSPNEVVRALVDVV 55
           AVL+LLL CELRQHDP AL+   P  W  V+  Y   + L  S +  S  E++   +D++
Sbjct: 108 AVLLLLLLCELRQHDPEALD-LPPSRWRVVICQYIAKDALKFSSISCSNREIIMKFIDLL 166

Query: 54  AKCRRFV 34
           AKC+ FV
Sbjct: 167 AKCKNFV 173


>ref|XP_004302822.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Fragaria vesca
           subsp. vesca]
          Length = 272

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/75 (41%), Positives = 49/75 (65%)
 Frame = -3

Query: 234 AVLVLLLFCELRQHDPIALETTSPQDWHRVLAAYYCDNVLSLSGVKVSPNEVVRALVDVV 55
           AVL+LLL CE  QHDP AL+    + W  V+  +YCD++L++SG+      V+ + V+++
Sbjct: 102 AVLLLLLLCEAHQHDPDALQAPVTK-WREVVGKFYCDSMLTVSGIGDHNASVLVSYVEML 160

Query: 54  AKCRRFVGSATGCEA 10
            +C RFV S+ G +A
Sbjct: 161 TRCLRFVSSSFGGKA 175


>ref|XP_006428951.1| hypothetical protein CICLE_v10012410mg [Citrus clementina]
           gi|568853823|ref|XP_006480539.1| PREDICTED:
           uncharacterized protein LOC102609490 [Citrus sinensis]
           gi|557531008|gb|ESR42191.1| hypothetical protein
           CICLE_v10012410mg [Citrus clementina]
          Length = 281

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
 Frame = -3

Query: 234 AVLVLLLFCELRQHDPIALETTSPQDWHRVLAAYYCDNVLSLSGVKVSPNE--VVRALVD 61
           AVL+LLL CE+ Q DP AL       W  VL  ++C++ LSLSG+     E  V+   V+
Sbjct: 101 AVLLLLLLCEVHQQDPEALSAAPQAKWPAVLGKHFCESALSLSGIVGGAYEGAVLLPYVE 160

Query: 60  VVAKCRRFVGSATG 19
           +V +CRRFV +  G
Sbjct: 161 MVTRCRRFVNAMGG 174


>gb|EXB58572.1| E3 ubiquitin-protein ligase RING1-like protein [Morus notabilis]
          Length = 272

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/69 (43%), Positives = 41/69 (59%)
 Frame = -3

Query: 234 AVLVLLLFCELRQHDPIALETTSPQDWHRVLAAYYCDNVLSLSGVKVSPNEVVRALVDVV 55
           AVLVLLL C++RQH P ALE T P  W  VL + Y   +LS +G  +     +   ++  
Sbjct: 98  AVLVLLLLCDVRQHSPEALE-TPPFRWREVLGSVYARGMLSTAGYGIGSAAALLPYIETA 156

Query: 54  AKCRRFVGS 28
           A+C RFVG+
Sbjct: 157 ARCLRFVGN 165


>ref|XP_004249512.1| PREDICTED: uncharacterized protein LOC101254650 [Solanum
           lycopersicum]
          Length = 299

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = -3

Query: 231 VLVLLLFCELRQHDPIALETTSPQDWHRVLAAYYCDNVLSLSGVKVSPNEVVRALVDVVA 52
           V +LLL CEL QH+P AL+      W  +L  Y   ++L LSG++    EV+   +++VA
Sbjct: 109 VSMLLLLCELHQHEPGALDNAPLSCWRNILRDYMAKDMLKLSGIESCCGEVIIKFIELVA 168

Query: 51  KCRRFV 34
           KC+ FV
Sbjct: 169 KCKNFV 174


>ref|XP_004137953.1| PREDICTED: uncharacterized protein LOC101209757 [Cucumis sativus]
           gi|449529876|ref|XP_004171924.1| PREDICTED:
           uncharacterized protein LOC101225495 [Cucumis sativus]
          Length = 283

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/73 (36%), Positives = 41/73 (56%)
 Frame = -3

Query: 234 AVLVLLLFCELRQHDPIALETTSPQDWHRVLAAYYCDNVLSLSGVKVSPNEVVRALVDVV 55
           A ++LLL CE+RQH+P AL T   + W   L   Y D++L++SG+       +   +D V
Sbjct: 107 AAVLLLLLCEVRQHNPAALRTPITK-WRATLCKIYSDSLLTVSGLATGGGGALIPYIDTV 165

Query: 54  AKCRRFVGSATGC 16
            +C +FVG    C
Sbjct: 166 VRCWKFVGFVGSC 178


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