BLASTX nr result

ID: Rheum21_contig00020931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020931
         (426 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308377.2| hypothetical protein POPTR_0006s20460g [Popu...    57   3e-06
ref|XP_002308376.2| hypothetical protein POPTR_0006s20460g [Popu...    57   3e-06

>ref|XP_002308377.2| hypothetical protein POPTR_0006s20460g [Populus trichocarpa]
            gi|550336722|gb|EEE91900.2| hypothetical protein
            POPTR_0006s20460g [Populus trichocarpa]
          Length = 1344

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
 Frame = -3

Query: 400  ADHLRILGPQGVMGLSGEVQTTYCVATSHTVQSRSDDAAQSLASPIPCGRQEVLANKPVK 221
            +D  +I  P G++GL G+VQ+   ++T    +S  +D  Q  + P+   + ++L +KP  
Sbjct: 605  SDQSKISAPYGMIGLPGDVQSPCGMSTGGIPESHIEDYVQQHSVPM---QPQILLSKPAN 661

Query: 220  CE-NVVVGVPLETTETLSHEAAKD------------------------------------ 152
             + +   GVP++ +E L HE+ K+                                    
Sbjct: 662  TDVSHAAGVPIQASEQLVHESPKEYTGKLPGVVSKEYAVDSYISYDQLRLVDGMMDALHT 721

Query: 151  -NPEILCCTKKSRSPTDQPRKDDIFYQQSQQVASNDQLVNNAKSTPAVIP 5
              PEI     + +S  D+ RK++I   ++Q++A  + L++N  S P V+P
Sbjct: 722  RPPEINVNNDQKKSLVDKFRKEEILDHKTQKIAGREVLLDNTLSKPQVVP 771


>ref|XP_002308376.2| hypothetical protein POPTR_0006s20460g [Populus trichocarpa]
            gi|550336721|gb|EEE91899.2| hypothetical protein
            POPTR_0006s20460g [Populus trichocarpa]
          Length = 1459

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
 Frame = -3

Query: 400  ADHLRILGPQGVMGLSGEVQTTYCVATSHTVQSRSDDAAQSLASPIPCGRQEVLANKPVK 221
            +D  +I  P G++GL G+VQ+   ++T    +S  +D  Q  + P+   + ++L +KP  
Sbjct: 720  SDQSKISAPYGMIGLPGDVQSPCGMSTGGIPESHIEDYVQQHSVPM---QPQILLSKPAN 776

Query: 220  CE-NVVVGVPLETTETLSHEAAKD------------------------------------ 152
             + +   GVP++ +E L HE+ K+                                    
Sbjct: 777  TDVSHAAGVPIQASEQLVHESPKEYTGKLPGVVSKEYAVDSYISYDQLRLVDGMMDALHT 836

Query: 151  -NPEILCCTKKSRSPTDQPRKDDIFYQQSQQVASNDQLVNNAKSTPAVIP 5
              PEI     + +S  D+ RK++I   ++Q++A  + L++N  S P V+P
Sbjct: 837  RPPEINVNNDQKKSLVDKFRKEEILDHKTQKIAGREVLLDNTLSKPQVVP 886


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