BLASTX nr result
ID: Rheum21_contig00020904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00020904
(275 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004306984.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 149 3e-34
ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch... 142 4e-32
gb|ESW06459.1| hypothetical protein PHAVU_010G049600g [Phaseolus... 139 3e-31
gb|ESW06458.1| hypothetical protein PHAVU_010G049600g [Phaseolus... 139 3e-31
gb|EOX96483.1| Glycine-tRNA ligases [Theobroma cacao] 137 1e-30
ref|XP_006576716.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 136 3e-30
ref|XP_003520424.2| PREDICTED: glycine--tRNA ligase 2, chloropla... 136 3e-30
ref|XP_002320880.2| hypothetical protein POPTR_0014s04810g [Popu... 136 3e-30
ref|XP_006464416.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 135 4e-30
ref|XP_006464415.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 135 4e-30
ref|XP_006464414.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 135 4e-30
ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop... 134 1e-29
gb|EXB99559.1| Glycine--tRNA ligase 2 [Morus notabilis] 133 3e-29
ref|XP_006347970.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 133 3e-29
ref|XP_004515345.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 132 4e-29
ref|XP_004515344.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 132 4e-29
ref|XP_004229742.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 132 4e-29
ref|XP_004170547.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 131 8e-29
ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 131 8e-29
gb|EMS59636.1| Glycyl-tRNA synthetase 2, chloroplastic/mitochond... 126 3e-27
>ref|XP_004306984.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 1065
Score = 149 bits (377), Expect = 3e-34
Identities = 69/91 (75%), Positives = 79/91 (86%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD+++QLLAKQ+L HGE+ AFGTPRRLVV VE L KQ +NEVE RGPP SK+FDDQGN
Sbjct: 405 LKDLVTQLLAKQRLGHGEVQAFGTPRRLVVCVENLCTKQMENEVEVRGPPVSKSFDDQGN 464
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA EGFCRRY+VPL SLYR+ DGKTEY+Y
Sbjct: 465 PTKAAEGFCRRYSVPLNSLYRKTDGKTEYIY 495
>ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223548759|gb|EEF50248.1|
Glycyl-tRNA synthetase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 1069
Score = 142 bits (359), Expect = 4e-32
Identities = 66/91 (72%), Positives = 76/91 (83%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD++ QLL KQ+L HGE+ AFGTPRRLVV VE L KQ + EVE RGPP SKAFD+QGN
Sbjct: 409 LKDLVVQLLEKQRLRHGEVQAFGTPRRLVVCVESLSAKQPEIEVEVRGPPVSKAFDEQGN 468
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA EGFCRRYN+PL SL+R+ DGKTEY+Y
Sbjct: 469 PTKAAEGFCRRYNIPLDSLFRKADGKTEYIY 499
>gb|ESW06459.1| hypothetical protein PHAVU_010G049600g [Phaseolus vulgaris]
Length = 441
Score = 139 bits (351), Expect = 3e-31
Identities = 64/91 (70%), Positives = 78/91 (85%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD++ QLL +Q+L+HGE+ AFGTPRRLVV+V+ L KQ + EVE RGPP SKAFD +GN
Sbjct: 287 LKDLVLQLLERQRLNHGEVQAFGTPRRLVVAVQNLYTKQAEKEVEVRGPPVSKAFDHEGN 346
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKAIEGFCRRY+VPL +YR+VDGKTEY+Y
Sbjct: 347 PTKAIEGFCRRYSVPLDLVYRKVDGKTEYVY 377
>gb|ESW06458.1| hypothetical protein PHAVU_010G049600g [Phaseolus vulgaris]
Length = 564
Score = 139 bits (351), Expect = 3e-31
Identities = 64/91 (70%), Positives = 78/91 (85%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD++ QLL +Q+L+HGE+ AFGTPRRLVV+V+ L KQ + EVE RGPP SKAFD +GN
Sbjct: 410 LKDLVLQLLERQRLNHGEVQAFGTPRRLVVAVQNLYTKQAEKEVEVRGPPVSKAFDHEGN 469
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKAIEGFCRRY+VPL +YR+VDGKTEY+Y
Sbjct: 470 PTKAIEGFCRRYSVPLDLVYRKVDGKTEYVY 500
>gb|EOX96483.1| Glycine-tRNA ligases [Theobroma cacao]
Length = 1071
Score = 137 bits (345), Expect = 1e-30
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD++S+LL KQ+L+HG I AF TPRRLV+SVE L +Q +NEVE RGPP KAFD QGN
Sbjct: 411 LKDLMSELLEKQRLNHGGIQAFATPRRLVISVESLCPRQTENEVEVRGPPVLKAFDQQGN 470
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA EGFCRRY VPL SL+R+VDGKTEY+Y
Sbjct: 471 PTKAAEGFCRRYAVPLDSLFRKVDGKTEYVY 501
>ref|XP_006576716.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X2 [Glycine max]
Length = 947
Score = 136 bits (343), Expect = 3e-30
Identities = 64/91 (70%), Positives = 77/91 (84%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD++ QLL +Q+L+HGE+ AFGTPRRLVV+VE L KQ + EVE RGPP SKAFD +GN
Sbjct: 287 LKDLLLQLLERQRLNHGEVQAFGTPRRLVVAVENLCTKQAEKEVEVRGPPVSKAFDHEGN 346
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKAIEGF RRY+VPL +YR+VDGKTEY+Y
Sbjct: 347 PTKAIEGFSRRYSVPLDLVYRKVDGKTEYVY 377
>ref|XP_003520424.2| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X1 [Glycine max]
Length = 1099
Score = 136 bits (343), Expect = 3e-30
Identities = 64/91 (70%), Positives = 77/91 (84%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD++ QLL +Q+L+HGE+ AFGTPRRLVV+VE L KQ + EVE RGPP SKAFD +GN
Sbjct: 439 LKDLLLQLLERQRLNHGEVQAFGTPRRLVVAVENLCTKQAEKEVEVRGPPVSKAFDHEGN 498
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKAIEGF RRY+VPL +YR+VDGKTEY+Y
Sbjct: 499 PTKAIEGFSRRYSVPLDLVYRKVDGKTEYVY 529
>ref|XP_002320880.2| hypothetical protein POPTR_0014s04810g [Populus trichocarpa]
gi|550323472|gb|EEE99195.2| hypothetical protein
POPTR_0014s04810g [Populus trichocarpa]
Length = 1078
Score = 136 bits (343), Expect = 3e-30
Identities = 63/91 (69%), Positives = 76/91 (83%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD++ QLL KQ+LSHG++ AFGTPRRLVV VE L KQ + E+E RGPP SKAFD +GN
Sbjct: 418 LKDLVLQLLEKQRLSHGKVEAFGTPRRLVVCVESLSTKQAEIELEVRGPPVSKAFDQEGN 477
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA EGFCRRYN+ L SL+R+VDGKTEY++
Sbjct: 478 PTKAAEGFCRRYNISLDSLFRKVDGKTEYVH 508
>ref|XP_006464416.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X3 [Citrus sinensis]
Length = 867
Score = 135 bits (341), Expect = 4e-30
Identities = 65/91 (71%), Positives = 74/91 (81%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD++ QLL KQKLSHGE+ AFGTPRRLVV VE L KQ +NE EARGPP SKAFD QGN
Sbjct: 207 LKDLMLQLLNKQKLSHGEVQAFGTPRRLVVFVESLCQKQSENEFEARGPPVSKAFDQQGN 266
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA+EGFC+RY VP+ SL + GKTEY+Y
Sbjct: 267 PTKAVEGFCQRYAVPIDSLVTKAAGKTEYVY 297
>ref|XP_006464415.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X2 [Citrus sinensis]
Length = 947
Score = 135 bits (341), Expect = 4e-30
Identities = 65/91 (71%), Positives = 74/91 (81%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD++ QLL KQKLSHGE+ AFGTPRRLVV VE L KQ +NE EARGPP SKAFD QGN
Sbjct: 287 LKDLMLQLLNKQKLSHGEVQAFGTPRRLVVFVESLCQKQSENEFEARGPPVSKAFDQQGN 346
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA+EGFC+RY VP+ SL + GKTEY+Y
Sbjct: 347 PTKAVEGFCQRYAVPIDSLVTKAAGKTEYVY 377
>ref|XP_006464414.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 1070
Score = 135 bits (341), Expect = 4e-30
Identities = 65/91 (71%), Positives = 74/91 (81%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD++ QLL KQKLSHGE+ AFGTPRRLVV VE L KQ +NE EARGPP SKAFD QGN
Sbjct: 410 LKDLMLQLLNKQKLSHGEVQAFGTPRRLVVFVESLCQKQSENEFEARGPPVSKAFDQQGN 469
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA+EGFC+RY VP+ SL + GKTEY+Y
Sbjct: 470 PTKAVEGFCQRYAVPIDSLVTKAAGKTEYVY 500
>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2,
chloroplastic/mitochondrial-like [Vitis vinifera]
gi|297734621|emb|CBI16672.3| unnamed protein product
[Vitis vinifera]
Length = 1071
Score = 134 bits (338), Expect = 1e-29
Identities = 65/91 (71%), Positives = 73/91 (80%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD+I QLL KQ+L H E+ AFGTPRRLVV V+ L KQ +NEVE RGPP SKAFD Q N
Sbjct: 411 LKDLIMQLLDKQRLGHSEVQAFGTPRRLVVCVKNLSTKQAENEVEVRGPPVSKAFDGQRN 470
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA EGFCRRY V L SLY++VDGKTEY+Y
Sbjct: 471 PTKAAEGFCRRYCVSLDSLYKKVDGKTEYVY 501
>gb|EXB99559.1| Glycine--tRNA ligase 2 [Morus notabilis]
Length = 1124
Score = 133 bits (334), Expect = 3e-29
Identities = 66/98 (67%), Positives = 78/98 (79%), Gaps = 7/98 (7%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD + QLL KQ+LSHGE+ AFGTPRRLVV VE L +Q +N+VE RGPPASKAFDD+GN
Sbjct: 407 LKDSVLQLLDKQRLSHGEVQAFGTPRRLVVFVENLCSRQAENDVEFRGPPASKAFDDEGN 466
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVD-------GKTEYMY 274
PTKA EGF RRY+VPL SLY+++D GKTEY+Y
Sbjct: 467 PTKAAEGFSRRYSVPLNSLYKKIDEGSFSAAGKTEYVY 504
>ref|XP_006347970.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
[Solanum tuberosum]
Length = 1063
Score = 133 bits (334), Expect = 3e-29
Identities = 64/91 (70%), Positives = 74/91 (81%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD+I QLL KQ+L HGE+ GTPRR+VVSVE L KQ ++EVE RGPP SKAFD +GN
Sbjct: 403 LKDLIVQLLDKQRLLHGEVQTHGTPRRVVVSVEKLHSKQVEHEVEIRGPPVSKAFDKEGN 462
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA EGFCRR NVPL S+YRR +GKTEY+Y
Sbjct: 463 PTKAAEGFCRRNNVPLDSMYRRAEGKTEYVY 493
>ref|XP_004515345.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X2 [Cicer arietinum]
Length = 947
Score = 132 bits (333), Expect = 4e-29
Identities = 63/91 (69%), Positives = 75/91 (82%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD+I QLL +Q+L HGE+ FGT RRLVVSVE L KQ + EVE RGPP SKAFD++GN
Sbjct: 287 LKDLILQLLERQRLKHGEVQVFGTARRLVVSVENLLTKQTEQEVEVRGPPVSKAFDNEGN 346
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA EGF RRY+VPL S+Y++VDGKTEY+Y
Sbjct: 347 PTKAAEGFSRRYSVPLDSVYQKVDGKTEYVY 377
>ref|XP_004515344.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
isoform X1 [Cicer arietinum]
Length = 1074
Score = 132 bits (333), Expect = 4e-29
Identities = 63/91 (69%), Positives = 75/91 (82%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD+I QLL +Q+L HGE+ FGT RRLVVSVE L KQ + EVE RGPP SKAFD++GN
Sbjct: 414 LKDLILQLLERQRLKHGEVQVFGTARRLVVSVENLLTKQTEQEVEVRGPPVSKAFDNEGN 473
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA EGF RRY+VPL S+Y++VDGKTEY+Y
Sbjct: 474 PTKAAEGFSRRYSVPLDSVYQKVDGKTEYVY 504
>ref|XP_004229742.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
[Solanum lycopersicum]
Length = 1061
Score = 132 bits (333), Expect = 4e-29
Identities = 64/91 (70%), Positives = 74/91 (81%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LKD+I QLL KQ+L HGE+ GTPRR+VVSVE L KQ ++EVE RGPP SKAFD +GN
Sbjct: 401 LKDLIVQLLDKQRLLHGEVQTHGTPRRVVVSVEKLHPKQVEHEVEIRGPPVSKAFDTEGN 460
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA EGFCRR NVPL S+YRR +GKTEY+Y
Sbjct: 461 PTKAAEGFCRRNNVPLDSMYRRAEGKTEYVY 491
>ref|XP_004170547.1| PREDICTED: glycine--tRNA ligase 2,
chloroplastic/mitochondrial-like, partial [Cucumis
sativus]
Length = 385
Score = 131 bits (330), Expect = 8e-29
Identities = 61/91 (67%), Positives = 72/91 (79%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LK + QLL K +LSHG + AFGTPRRLVV VE L KQ + E E RGPP SKAFDDQGN
Sbjct: 259 LKTYMLQLLEKHRLSHGNVQAFGTPRRLVVKVESLCSKQVEKEFEVRGPPVSKAFDDQGN 318
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA+EGFCRRY++ SLY+++DGKTEY+Y
Sbjct: 319 PTKAVEGFCRRYSISRESLYKKIDGKTEYLY 349
>ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 1068
Score = 131 bits (330), Expect = 8e-29
Identities = 61/91 (67%), Positives = 72/91 (79%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
LK + QLL K +LSHG + AFGTPRRLVV VE L KQ + E E RGPP SKAFDDQGN
Sbjct: 408 LKTYMLQLLEKHRLSHGNVQAFGTPRRLVVKVESLCSKQVEKEFEVRGPPVSKAFDDQGN 467
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA+EGFCRRY++ SLY+++DGKTEY+Y
Sbjct: 468 PTKAVEGFCRRYSISRESLYKKIDGKTEYLY 498
>gb|EMS59636.1| Glycyl-tRNA synthetase 2, chloroplastic/mitochondrial [Triticum
urartu]
Length = 909
Score = 126 bits (317), Expect = 3e-27
Identities = 57/91 (62%), Positives = 73/91 (80%)
Frame = +2
Query: 2 LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
L+ + Q+L K++LSHG++ ++GTPRRL V VE L +KQ + EVE RGPP +KAFD +G
Sbjct: 268 LEKYLVQILGKRRLSHGKVHSYGTPRRLAVVVENLSLKQMEEEVELRGPPVTKAFDQEGK 327
Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
PTKA EGFCR+ NVPL SLYR+VDGKTEY+Y
Sbjct: 328 PTKAAEGFCRKNNVPLDSLYRKVDGKTEYIY 358