BLASTX nr result

ID: Rheum21_contig00020904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020904
         (275 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004306984.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   149   3e-34
ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch...   142   4e-32
gb|ESW06459.1| hypothetical protein PHAVU_010G049600g [Phaseolus...   139   3e-31
gb|ESW06458.1| hypothetical protein PHAVU_010G049600g [Phaseolus...   139   3e-31
gb|EOX96483.1| Glycine-tRNA ligases [Theobroma cacao]                 137   1e-30
ref|XP_006576716.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   136   3e-30
ref|XP_003520424.2| PREDICTED: glycine--tRNA ligase 2, chloropla...   136   3e-30
ref|XP_002320880.2| hypothetical protein POPTR_0014s04810g [Popu...   136   3e-30
ref|XP_006464416.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   135   4e-30
ref|XP_006464415.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   135   4e-30
ref|XP_006464414.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   135   4e-30
ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   134   1e-29
gb|EXB99559.1| Glycine--tRNA ligase 2 [Morus notabilis]               133   3e-29
ref|XP_006347970.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   133   3e-29
ref|XP_004515345.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   132   4e-29
ref|XP_004515344.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   132   4e-29
ref|XP_004229742.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   132   4e-29
ref|XP_004170547.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   131   8e-29
ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   131   8e-29
gb|EMS59636.1| Glycyl-tRNA synthetase 2, chloroplastic/mitochond...   126   3e-27

>ref|XP_004306984.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           [Fragaria vesca subsp. vesca]
          Length = 1065

 Score =  149 bits (377), Expect = 3e-34
 Identities = 69/91 (75%), Positives = 79/91 (86%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD+++QLLAKQ+L HGE+ AFGTPRRLVV VE L  KQ +NEVE RGPP SK+FDDQGN
Sbjct: 405 LKDLVTQLLAKQRLGHGEVQAFGTPRRLVVCVENLCTKQMENEVEVRGPPVSKSFDDQGN 464

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA EGFCRRY+VPL SLYR+ DGKTEY+Y
Sbjct: 465 PTKAAEGFCRRYSVPLNSLYRKTDGKTEYIY 495


>ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor,
           putative [Ricinus communis] gi|223548759|gb|EEF50248.1|
           Glycyl-tRNA synthetase 2, chloroplast/mitochondrial
           precursor, putative [Ricinus communis]
          Length = 1069

 Score =  142 bits (359), Expect = 4e-32
 Identities = 66/91 (72%), Positives = 76/91 (83%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD++ QLL KQ+L HGE+ AFGTPRRLVV VE L  KQ + EVE RGPP SKAFD+QGN
Sbjct: 409 LKDLVVQLLEKQRLRHGEVQAFGTPRRLVVCVESLSAKQPEIEVEVRGPPVSKAFDEQGN 468

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA EGFCRRYN+PL SL+R+ DGKTEY+Y
Sbjct: 469 PTKAAEGFCRRYNIPLDSLFRKADGKTEYIY 499


>gb|ESW06459.1| hypothetical protein PHAVU_010G049600g [Phaseolus vulgaris]
          Length = 441

 Score =  139 bits (351), Expect = 3e-31
 Identities = 64/91 (70%), Positives = 78/91 (85%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD++ QLL +Q+L+HGE+ AFGTPRRLVV+V+ L  KQ + EVE RGPP SKAFD +GN
Sbjct: 287 LKDLVLQLLERQRLNHGEVQAFGTPRRLVVAVQNLYTKQAEKEVEVRGPPVSKAFDHEGN 346

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKAIEGFCRRY+VPL  +YR+VDGKTEY+Y
Sbjct: 347 PTKAIEGFCRRYSVPLDLVYRKVDGKTEYVY 377


>gb|ESW06458.1| hypothetical protein PHAVU_010G049600g [Phaseolus vulgaris]
          Length = 564

 Score =  139 bits (351), Expect = 3e-31
 Identities = 64/91 (70%), Positives = 78/91 (85%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD++ QLL +Q+L+HGE+ AFGTPRRLVV+V+ L  KQ + EVE RGPP SKAFD +GN
Sbjct: 410 LKDLVLQLLERQRLNHGEVQAFGTPRRLVVAVQNLYTKQAEKEVEVRGPPVSKAFDHEGN 469

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKAIEGFCRRY+VPL  +YR+VDGKTEY+Y
Sbjct: 470 PTKAIEGFCRRYSVPLDLVYRKVDGKTEYVY 500


>gb|EOX96483.1| Glycine-tRNA ligases [Theobroma cacao]
          Length = 1071

 Score =  137 bits (345), Expect = 1e-30
 Identities = 65/91 (71%), Positives = 76/91 (83%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD++S+LL KQ+L+HG I AF TPRRLV+SVE L  +Q +NEVE RGPP  KAFD QGN
Sbjct: 411 LKDLMSELLEKQRLNHGGIQAFATPRRLVISVESLCPRQTENEVEVRGPPVLKAFDQQGN 470

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA EGFCRRY VPL SL+R+VDGKTEY+Y
Sbjct: 471 PTKAAEGFCRRYAVPLDSLFRKVDGKTEYVY 501


>ref|XP_006576716.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           isoform X2 [Glycine max]
          Length = 947

 Score =  136 bits (343), Expect = 3e-30
 Identities = 64/91 (70%), Positives = 77/91 (84%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD++ QLL +Q+L+HGE+ AFGTPRRLVV+VE L  KQ + EVE RGPP SKAFD +GN
Sbjct: 287 LKDLLLQLLERQRLNHGEVQAFGTPRRLVVAVENLCTKQAEKEVEVRGPPVSKAFDHEGN 346

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKAIEGF RRY+VPL  +YR+VDGKTEY+Y
Sbjct: 347 PTKAIEGFSRRYSVPLDLVYRKVDGKTEYVY 377


>ref|XP_003520424.2| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           isoform X1 [Glycine max]
          Length = 1099

 Score =  136 bits (343), Expect = 3e-30
 Identities = 64/91 (70%), Positives = 77/91 (84%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD++ QLL +Q+L+HGE+ AFGTPRRLVV+VE L  KQ + EVE RGPP SKAFD +GN
Sbjct: 439 LKDLLLQLLERQRLNHGEVQAFGTPRRLVVAVENLCTKQAEKEVEVRGPPVSKAFDHEGN 498

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKAIEGF RRY+VPL  +YR+VDGKTEY+Y
Sbjct: 499 PTKAIEGFSRRYSVPLDLVYRKVDGKTEYVY 529


>ref|XP_002320880.2| hypothetical protein POPTR_0014s04810g [Populus trichocarpa]
           gi|550323472|gb|EEE99195.2| hypothetical protein
           POPTR_0014s04810g [Populus trichocarpa]
          Length = 1078

 Score =  136 bits (343), Expect = 3e-30
 Identities = 63/91 (69%), Positives = 76/91 (83%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD++ QLL KQ+LSHG++ AFGTPRRLVV VE L  KQ + E+E RGPP SKAFD +GN
Sbjct: 418 LKDLVLQLLEKQRLSHGKVEAFGTPRRLVVCVESLSTKQAEIELEVRGPPVSKAFDQEGN 477

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA EGFCRRYN+ L SL+R+VDGKTEY++
Sbjct: 478 PTKAAEGFCRRYNISLDSLFRKVDGKTEYVH 508


>ref|XP_006464416.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           isoform X3 [Citrus sinensis]
          Length = 867

 Score =  135 bits (341), Expect = 4e-30
 Identities = 65/91 (71%), Positives = 74/91 (81%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD++ QLL KQKLSHGE+ AFGTPRRLVV VE L  KQ +NE EARGPP SKAFD QGN
Sbjct: 207 LKDLMLQLLNKQKLSHGEVQAFGTPRRLVVFVESLCQKQSENEFEARGPPVSKAFDQQGN 266

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA+EGFC+RY VP+ SL  +  GKTEY+Y
Sbjct: 267 PTKAVEGFCQRYAVPIDSLVTKAAGKTEYVY 297


>ref|XP_006464415.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           isoform X2 [Citrus sinensis]
          Length = 947

 Score =  135 bits (341), Expect = 4e-30
 Identities = 65/91 (71%), Positives = 74/91 (81%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD++ QLL KQKLSHGE+ AFGTPRRLVV VE L  KQ +NE EARGPP SKAFD QGN
Sbjct: 287 LKDLMLQLLNKQKLSHGEVQAFGTPRRLVVFVESLCQKQSENEFEARGPPVSKAFDQQGN 346

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA+EGFC+RY VP+ SL  +  GKTEY+Y
Sbjct: 347 PTKAVEGFCQRYAVPIDSLVTKAAGKTEYVY 377


>ref|XP_006464414.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           isoform X1 [Citrus sinensis]
          Length = 1070

 Score =  135 bits (341), Expect = 4e-30
 Identities = 65/91 (71%), Positives = 74/91 (81%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD++ QLL KQKLSHGE+ AFGTPRRLVV VE L  KQ +NE EARGPP SKAFD QGN
Sbjct: 410 LKDLMLQLLNKQKLSHGEVQAFGTPRRLVVFVESLCQKQSENEFEARGPPVSKAFDQQGN 469

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA+EGFC+RY VP+ SL  +  GKTEY+Y
Sbjct: 470 PTKAVEGFCQRYAVPIDSLVTKAAGKTEYVY 500


>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2,
           chloroplastic/mitochondrial-like [Vitis vinifera]
           gi|297734621|emb|CBI16672.3| unnamed protein product
           [Vitis vinifera]
          Length = 1071

 Score =  134 bits (338), Expect = 1e-29
 Identities = 65/91 (71%), Positives = 73/91 (80%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD+I QLL KQ+L H E+ AFGTPRRLVV V+ L  KQ +NEVE RGPP SKAFD Q N
Sbjct: 411 LKDLIMQLLDKQRLGHSEVQAFGTPRRLVVCVKNLSTKQAENEVEVRGPPVSKAFDGQRN 470

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA EGFCRRY V L SLY++VDGKTEY+Y
Sbjct: 471 PTKAAEGFCRRYCVSLDSLYKKVDGKTEYVY 501


>gb|EXB99559.1| Glycine--tRNA ligase 2 [Morus notabilis]
          Length = 1124

 Score =  133 bits (334), Expect = 3e-29
 Identities = 66/98 (67%), Positives = 78/98 (79%), Gaps = 7/98 (7%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD + QLL KQ+LSHGE+ AFGTPRRLVV VE L  +Q +N+VE RGPPASKAFDD+GN
Sbjct: 407 LKDSVLQLLDKQRLSHGEVQAFGTPRRLVVFVENLCSRQAENDVEFRGPPASKAFDDEGN 466

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVD-------GKTEYMY 274
           PTKA EGF RRY+VPL SLY+++D       GKTEY+Y
Sbjct: 467 PTKAAEGFSRRYSVPLNSLYKKIDEGSFSAAGKTEYVY 504


>ref|XP_006347970.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           [Solanum tuberosum]
          Length = 1063

 Score =  133 bits (334), Expect = 3e-29
 Identities = 64/91 (70%), Positives = 74/91 (81%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD+I QLL KQ+L HGE+   GTPRR+VVSVE L  KQ ++EVE RGPP SKAFD +GN
Sbjct: 403 LKDLIVQLLDKQRLLHGEVQTHGTPRRVVVSVEKLHSKQVEHEVEIRGPPVSKAFDKEGN 462

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA EGFCRR NVPL S+YRR +GKTEY+Y
Sbjct: 463 PTKAAEGFCRRNNVPLDSMYRRAEGKTEYVY 493


>ref|XP_004515345.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           isoform X2 [Cicer arietinum]
          Length = 947

 Score =  132 bits (333), Expect = 4e-29
 Identities = 63/91 (69%), Positives = 75/91 (82%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD+I QLL +Q+L HGE+  FGT RRLVVSVE L  KQ + EVE RGPP SKAFD++GN
Sbjct: 287 LKDLILQLLERQRLKHGEVQVFGTARRLVVSVENLLTKQTEQEVEVRGPPVSKAFDNEGN 346

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA EGF RRY+VPL S+Y++VDGKTEY+Y
Sbjct: 347 PTKAAEGFSRRYSVPLDSVYQKVDGKTEYVY 377


>ref|XP_004515344.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           isoform X1 [Cicer arietinum]
          Length = 1074

 Score =  132 bits (333), Expect = 4e-29
 Identities = 63/91 (69%), Positives = 75/91 (82%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD+I QLL +Q+L HGE+  FGT RRLVVSVE L  KQ + EVE RGPP SKAFD++GN
Sbjct: 414 LKDLILQLLERQRLKHGEVQVFGTARRLVVSVENLLTKQTEQEVEVRGPPVSKAFDNEGN 473

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA EGF RRY+VPL S+Y++VDGKTEY+Y
Sbjct: 474 PTKAAEGFSRRYSVPLDSVYQKVDGKTEYVY 504


>ref|XP_004229742.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           [Solanum lycopersicum]
          Length = 1061

 Score =  132 bits (333), Expect = 4e-29
 Identities = 64/91 (70%), Positives = 74/91 (81%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LKD+I QLL KQ+L HGE+   GTPRR+VVSVE L  KQ ++EVE RGPP SKAFD +GN
Sbjct: 401 LKDLIVQLLDKQRLLHGEVQTHGTPRRVVVSVEKLHPKQVEHEVEIRGPPVSKAFDTEGN 460

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA EGFCRR NVPL S+YRR +GKTEY+Y
Sbjct: 461 PTKAAEGFCRRNNVPLDSMYRRAEGKTEYVY 491


>ref|XP_004170547.1| PREDICTED: glycine--tRNA ligase 2,
           chloroplastic/mitochondrial-like, partial [Cucumis
           sativus]
          Length = 385

 Score =  131 bits (330), Expect = 8e-29
 Identities = 61/91 (67%), Positives = 72/91 (79%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LK  + QLL K +LSHG + AFGTPRRLVV VE L  KQ + E E RGPP SKAFDDQGN
Sbjct: 259 LKTYMLQLLEKHRLSHGNVQAFGTPRRLVVKVESLCSKQVEKEFEVRGPPVSKAFDDQGN 318

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA+EGFCRRY++   SLY+++DGKTEY+Y
Sbjct: 319 PTKAVEGFCRRYSISRESLYKKIDGKTEYLY 349


>ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           [Cucumis sativus]
          Length = 1068

 Score =  131 bits (330), Expect = 8e-29
 Identities = 61/91 (67%), Positives = 72/91 (79%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           LK  + QLL K +LSHG + AFGTPRRLVV VE L  KQ + E E RGPP SKAFDDQGN
Sbjct: 408 LKTYMLQLLEKHRLSHGNVQAFGTPRRLVVKVESLCSKQVEKEFEVRGPPVSKAFDDQGN 467

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA+EGFCRRY++   SLY+++DGKTEY+Y
Sbjct: 468 PTKAVEGFCRRYSISRESLYKKIDGKTEYLY 498


>gb|EMS59636.1| Glycyl-tRNA synthetase 2, chloroplastic/mitochondrial [Triticum
           urartu]
          Length = 909

 Score =  126 bits (317), Expect = 3e-27
 Identities = 57/91 (62%), Positives = 73/91 (80%)
 Frame = +2

Query: 2   LKDIISQLLAKQKLSHGEIVAFGTPRRLVVSVEGLGMKQQQNEVEARGPPASKAFDDQGN 181
           L+  + Q+L K++LSHG++ ++GTPRRL V VE L +KQ + EVE RGPP +KAFD +G 
Sbjct: 268 LEKYLVQILGKRRLSHGKVHSYGTPRRLAVVVENLSLKQMEEEVELRGPPVTKAFDQEGK 327

Query: 182 PTKAIEGFCRRYNVPLGSLYRRVDGKTEYMY 274
           PTKA EGFCR+ NVPL SLYR+VDGKTEY+Y
Sbjct: 328 PTKAAEGFCRKNNVPLDSLYRKVDGKTEYIY 358


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