BLASTX nr result
ID: Rheum21_contig00020897
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00020897
(1010 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531375.1| RNA and export factor binding protein, putat... 189 1e-45
ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [A... 187 6e-45
ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Popu... 185 2e-44
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 185 3e-44
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor... 185 3e-44
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro... 185 3e-44
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor... 184 4e-44
ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu... 184 5e-44
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 182 1e-43
gb|EOY34109.1| RNA-binding family protein [Theobroma cacao] 182 2e-43
emb|CAJ44457.1| ALY protein [Nicotiana benthamiana] 182 2e-43
dbj|BAB08363.1| RNA and export factor binding protein 2-I-like p... 182 2e-43
ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isof... 181 3e-43
ref|XP_004143092.1| PREDICTED: RNA and export factor-binding pro... 181 5e-43
ref|XP_002864660.1| hypothetical protein ARALYDRAFT_496130 [Arab... 180 7e-43
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao] 180 9e-43
ref|NP_851229.1| RNA recognition motif-containing protein [Arabi... 180 9e-43
gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus... 179 1e-42
ref|XP_006279678.1| hypothetical protein CARUB_v10026991mg [Caps... 179 1e-42
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro... 179 1e-42
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor
binding protein, putative [Ricinus communis]
Length = 247
Score = 189 bits (481), Expect = 1e-45
Identities = 121/257 (47%), Positives = 143/257 (55%), Gaps = 39/257 (15%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRG-NRAAPYSTAKV 272
MS+A+DMSLDD+IK NK+ F RG NRAAPY+ AK
Sbjct: 1 MSSALDMSLDDIIKSNKKP-----GSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAAAK- 54
Query: 273 QAPHGSWE---------------------AATSIETGTKLFISNLHYGVSTEDIKDLFST 389
AP +W+ A+ IETGTKL+ISNL YGVS EDIK+LFS
Sbjct: 55 -APESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSE 113
Query: 390 VGELKRYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSL 569
VG+LKRY +HYDRSGRSK TA+VVF+RR DA AA+K+YNNVQLDGKPMKIEIVG NI++
Sbjct: 114 VGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATP 173
Query: 570 AAAPAPVIVNRN-----------------PXXXXXXXXXXXXXXXXXXXXXXPVEKVSAK 698
AA PA N N EKVSA+
Sbjct: 174 AATPA---ANGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAE 230
Query: 699 DLDAELDKYHTEAMQTN 749
DLDA+L+KYH+EAMQTN
Sbjct: 231 DLDADLEKYHSEAMQTN 247
>ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
gi|548848813|gb|ERN07718.1| hypothetical protein
AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 187 bits (475), Expect = 6e-45
Identities = 118/256 (46%), Positives = 140/256 (54%), Gaps = 38/256 (14%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKV- 272
MS+A+DMSLDDLIK NK+S R NRAAPYS K
Sbjct: 1 MSSALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYSMGKAF 60
Query: 273 -QAPHGSWE----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGEL 401
AP +W+ ++IETGTKL+ISNL YGVS EDIK+LFS VG+L
Sbjct: 61 QAAPETTWQHDLFADPVGPYGVQAARPSAIETGTKLYISNLDYGVSNEDIKELFSEVGDL 120
Query: 402 KRYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNI------- 560
KRY +HYDRSGRSK TA+VVF+RR DA AA+K+YNNVQLDGKPMKIEIVG N+
Sbjct: 121 KRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTPAPIP 180
Query: 561 ---SSLAAAPAPV----------IVNRNPXXXXXXXXXXXXXXXXXXXXXXPVEKVSAKD 701
+ L A P + I+ R P EKVSA D
Sbjct: 181 QVANGLLATPNGIPRSVQPRGAGIIGRGPRGGGRGGGRGRGRGGRGGGRG---EKVSAAD 237
Query: 702 LDAELDKYHTEAMQTN 749
LDA+L+KYH+EAMQ N
Sbjct: 238 LDADLEKYHSEAMQIN 253
>ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321276|gb|ERP51753.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 245
Score = 185 bits (470), Expect = 2e-44
Identities = 112/248 (45%), Positives = 141/248 (56%), Gaps = 31/248 (12%)
Frame = +3
Query: 99 SNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQA 278
+ A+DMSLDD+I+ N++S R GN PYS +VQA
Sbjct: 3 TTALDMSLDDIIENNRKSSNSRGRPRSSGGPGPSRRFS-----NRAGNITTPYSKPQVQA 57
Query: 279 PHGSWE----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELKRY 410
P SW+ A+SIETGTKL+ISNL +GVSTEDIK+LFS +G+LKRY
Sbjct: 58 PETSWQHDMFTDNPVSASAYPARASSIETGTKLYISNLDFGVSTEDIKELFSEIGDLKRY 117
Query: 411 DVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPAP- 587
VHYDRSGRS+ TA++VFARR DA +A+K+YNNVQLDGKPMKIEIVG NI++ A P
Sbjct: 118 SVHYDRSGRSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEIVGTNIATRPAVPPST 177
Query: 588 --VIVNRNPXXXXXXXXXXXXXXXXXXXXXXPV------------EKVSAKDLDAELDKY 725
+ N+N V EK+SA+DLDA+L+KY
Sbjct: 178 NGMYRNQNIAAPRSSSQGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDADLEKY 237
Query: 726 HTEAMQTN 749
H+EAMQ N
Sbjct: 238 HSEAMQEN 245
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 185 bits (469), Expect = 3e-44
Identities = 117/253 (46%), Positives = 143/253 (56%), Gaps = 35/253 (13%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MS+A+DMSLDD+IK NK+S R NR APY+TAK
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIP----NRGANRVAPYTTAK-- 54
Query: 276 APHGSWE-----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELK 404
AP +W+ A++IETGTKL+ISNL YGVS EDIK+LFS VG+LK
Sbjct: 55 APETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLK 114
Query: 405 RYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPA 584
RY +HYDRSGRSK TA+VV++RR DA AA+K+YNNVQLDGKPMKIEIVG NI++ AAPA
Sbjct: 115 RYSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRTAAPA 174
Query: 585 PVIVNRNP---------------XXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLDAELD 719
+ N EK+SA+DLDA+LD
Sbjct: 175 ANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLD 234
Query: 720 KYH---TEAMQTN 749
KY+ +EAMQTN
Sbjct: 235 KYYSEASEAMQTN 247
>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 185 bits (469), Expect = 3e-44
Identities = 121/254 (47%), Positives = 141/254 (55%), Gaps = 36/254 (14%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MS A+DMSLDD+IK NK+S R NRAAPY+TAK
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFP----NRAANRAAPYATAK-- 54
Query: 276 APHGSWE-------------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGE 398
AP +W+ A SIETGTKL+ISNL YGVS++DIK+LF+ VG+
Sbjct: 55 APEATWQHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGD 114
Query: 399 LKRYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAA 578
LKR+ VHYDRSGRSK TA+VVF+RR DA AA+K+YNNVQLDGKPMKIEIVG NIS+ A
Sbjct: 115 LKRHAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVA 174
Query: 579 PA--PVIVN---------------RNPXXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLD 707
PA I N R P EKVSA DLD
Sbjct: 175 PARNGAIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRG-EKVSADDLD 233
Query: 708 AELDKYHTEAMQTN 749
A+L+KYH EAMQ N
Sbjct: 234 ADLEKYHAEAMQLN 247
>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 185 bits (469), Expect = 3e-44
Identities = 119/249 (47%), Positives = 140/249 (56%), Gaps = 31/249 (12%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MSNA+DMSLDDLIK NK+S R NR PYS +K
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLP---NRGANRITPYSVSK-- 55
Query: 276 APHGSWE----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELKR 407
AP +W+ ++IETGTKL+ISNL YGVS EDIK+LFS VG+LKR
Sbjct: 56 APETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 115
Query: 408 YDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPAP 587
Y +HYDRSGRSK TA+VVF+RR DA AA+K+YNNVQLDGKPMKIEIVG NI++ AA P P
Sbjct: 116 YSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVP-P 174
Query: 588 V----IVNRNPXXXXXXXXXXXXXXXXXXXXXXPV-----------EKVSAKDLDAELDK 722
V N N EKVSA+DLDA+L+K
Sbjct: 175 VTNGTFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEK 234
Query: 723 YHTEAMQTN 749
YH+EAMQ N
Sbjct: 235 YHSEAMQIN 243
>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 184 bits (468), Expect = 4e-44
Identities = 120/254 (47%), Positives = 140/254 (55%), Gaps = 36/254 (14%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MS A+DMSLDD+IK NK+S R NRAAPY+ AK
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLP----NRAANRAAPYAPAK-- 54
Query: 276 APHGSWE-------------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGE 398
AP +W+ A SIETGTKL+ISNL YGVS +DIK+LF+ VG+
Sbjct: 55 APEATWQHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGD 114
Query: 399 LKRYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAA 578
LKR+ VHYDRSGRSK TA+VVF+RR DA +A+K+YNNVQLDGKPMKIEIVG NIS+ A
Sbjct: 115 LKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVA 174
Query: 579 PAP--VIVN---------------RNPXXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLD 707
PAP I N R P EKVSA DLD
Sbjct: 175 PAPNGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRG-EKVSADDLD 233
Query: 708 AELDKYHTEAMQTN 749
A+L+KYH EAMQ N
Sbjct: 234 ADLEKYHAEAMQLN 247
>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321275|gb|ERP51752.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 244
Score = 184 bits (467), Expect = 5e-44
Identities = 112/247 (45%), Positives = 139/247 (56%), Gaps = 30/247 (12%)
Frame = +3
Query: 99 SNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQA 278
+ A+DMSLDD+I+ N++S R GN PYS +VQA
Sbjct: 3 TTALDMSLDDIIENNRKSSNSRGRPRSSGGPGPSRRFS-----NRAGNITTPYSKPQVQA 57
Query: 279 PHGSWE----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELKRY 410
P SW+ A+SIETGTKL+ISNL +GVSTEDIK+LFS +G+LKRY
Sbjct: 58 PETSWQHDMFTDNPVSASAYPARASSIETGTKLYISNLDFGVSTEDIKELFSEIGDLKRY 117
Query: 411 DVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAP--- 581
VHYDRSGRS+ TA++VFARR DA +A+K+YNNVQLDGKPMKIEIVG NI++ A P
Sbjct: 118 SVHYDRSGRSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEIVGTNIATRPAVPPST 177
Query: 582 ----------AP-VIVNRNPXXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLDAELDKYH 728
AP R EK+SA+DLDA+L+KYH
Sbjct: 178 NGMYRNQNIAAPRSSQGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDADLEKYH 237
Query: 729 TEAMQTN 749
+EAMQ N
Sbjct: 238 SEAMQEN 244
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 182 bits (463), Expect = 1e-43
Identities = 116/253 (45%), Positives = 142/253 (56%), Gaps = 35/253 (13%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MS+A+DMSLDD+IK NK+S R NR APY+TAK
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIP----NRGANRVAPYTTAK-- 54
Query: 276 APHGSWE-----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELK 404
AP +W+ A++IETGTKL+ISNL YGVS EDIK+LFS VG+LK
Sbjct: 55 APETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLK 114
Query: 405 RYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPA 584
RY +HYDRSGRSK TA+VV++RR DA AA+K+YN VQLDGKPMKIEIVG NI++ AAPA
Sbjct: 115 RYSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEIVGTNIATRTAAPA 174
Query: 585 PVIVNRNP---------------XXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLDAELD 719
+ N EK+SA+DLDA+LD
Sbjct: 175 ANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLD 234
Query: 720 KYH---TEAMQTN 749
KY+ +EAMQTN
Sbjct: 235 KYYSEASEAMQTN 247
>gb|EOY34109.1| RNA-binding family protein [Theobroma cacao]
Length = 241
Score = 182 bits (462), Expect = 2e-43
Identities = 114/248 (45%), Positives = 143/248 (57%), Gaps = 30/248 (12%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRG-NRAAPYSTAKV 272
MS+A++MSLDDLIK+N++S F RG NR+ PY+ AK
Sbjct: 1 MSSALEMSLDDLIKRNRKS-----GSGNSRGRGRGSGPGPARRFPNRGANRSGPYTAAK- 54
Query: 273 QAPHGSWE----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELK 404
AP +W+ A++IETGTKL+ISNL YGVS +DIK+LF+ VG+LK
Sbjct: 55 -APETTWQHDMYSDKGAAFQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFAEVGDLK 113
Query: 405 RYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPA 584
R+ +HYDRSGRSK TA+VVF+RR DA AA+K+YNNVQLDGKPMKIEIVG N+++ A A
Sbjct: 114 RFTIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNVATPGAPSA 173
Query: 585 --PVIVNRNPXXXXXXXXXXXXXXXXXXXXXXPV-----------EKVSAKDLDAELDKY 725
N N EKVSA+DLDAEL+KY
Sbjct: 174 GNGAFGNSNGAPRGGHGRGGGFGKQRGGGGGRGFGRGRGRGKGRGEKVSAEDLDAELEKY 233
Query: 726 HTEAMQTN 749
H+EAMQTN
Sbjct: 234 HSEAMQTN 241
>emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
Length = 246
Score = 182 bits (462), Expect = 2e-43
Identities = 108/247 (43%), Positives = 133/247 (53%), Gaps = 29/247 (11%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MSN +D+SLDDLIK+NK S R R+APYS+ V
Sbjct: 1 MSN-LDVSLDDLIKRNKSSSSRNPRPRTSGSGSGSGGPGPRRRPNRAAKRSAPYSSGPVH 59
Query: 276 APHGSWE------------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGEL 401
AP +W+ + IETG KL ISNL YGVS EDIK+LFS G++
Sbjct: 60 APESTWDHDMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNEDIKELFSEAGDI 119
Query: 402 KRYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAP 581
KRY +HYD+SGRSK TA+V+F+RR DA AAIKKYNNVQLDGKPMKIE G NI + A P
Sbjct: 120 KRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGKPMKIEFAGPNIGAPALPP 179
Query: 582 APVIVNRNPXXXXXXXXXXXXXXXXXXXXXXPV-----------EKVSAKDLDAELDKYH 728
+ RNP + E +SA+DLDA+L+KYH
Sbjct: 180 IRNRLYRNPNPAPRSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYH 239
Query: 729 TEAMQTN 749
+EAM+TN
Sbjct: 240 SEAMETN 246
>dbj|BAB08363.1| RNA and export factor binding protein 2-I-like protein [Arabidopsis
thaliana]
Length = 239
Score = 182 bits (461), Expect = 2e-43
Identities = 111/243 (45%), Positives = 139/243 (57%), Gaps = 25/243 (10%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MS +DMSLDD+I KN++S+ N R+ R+APY +AK
Sbjct: 1 MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSGPGPTRRN-NPNRKSTRSAPYQSAK-- 57
Query: 276 APHGSW---------------EAATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELKRY 410
AP +W ++ IETGTKL+ISNL YGV EDIK+LF+ VGELKRY
Sbjct: 58 APESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRY 117
Query: 411 DVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPAPV 590
VH+DRSGRSK TA+VV++RR DA AA+KKYN+VQLDGKPMKIEIVG N+ + AAAP+
Sbjct: 118 TVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQT-AAAPSGR 176
Query: 591 IVNRN----------PXXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLDAELDKYHTEAM 740
N N P EK+SA+DLDA+LDKYH+ M
Sbjct: 177 PANGNSNGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGDM 236
Query: 741 QTN 749
+TN
Sbjct: 237 ETN 239
>ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isoform X1 [Glycine max]
Length = 243
Score = 181 bits (460), Expect = 3e-43
Identities = 114/249 (45%), Positives = 139/249 (55%), Gaps = 31/249 (12%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MS A+DM+L+D+IK NK+S R NRAAPY+ AK
Sbjct: 1 MSAALDMTLEDIIKNNKKSSLANTRGRGRASGPGPARRLP----NRAANRAAPYAAAK-- 54
Query: 276 APHGSWE----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELKR 407
AP +W+ A+SIETGTKL+ISNL YGVS +DIK+LF VG++KR
Sbjct: 55 APETAWKHDMYANQPVAAAYPGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDVKR 114
Query: 408 YDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPAP 587
+ VHYDRSGRSK TA+VVF+RR DA AA+K+YNNVQLDGKPMK+EIVG NI++ AA PA
Sbjct: 115 HTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNIATHAAPPAV 174
Query: 588 VIVNRNP---------------XXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLDAELDK 722
NP EKVSA+DLDA+L+K
Sbjct: 175 NGTFGNPTGVPRSGQGRSGSLGRPRGGSRGRGSIQRGRGRGRGGRDEKVSAEDLDADLEK 234
Query: 723 YHTEAMQTN 749
YH EAMQ N
Sbjct: 235 YHAEAMQLN 243
>ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus] gi|449508143|ref|XP_004163231.1| PREDICTED: RNA
and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 181 bits (458), Expect = 5e-43
Identities = 108/244 (44%), Positives = 136/244 (55%), Gaps = 26/244 (10%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
M+ +DMSLDD+IK NK+S+ F R PYS K
Sbjct: 1 MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVR-----RFPNRAANRTPYSAPK-- 53
Query: 276 APHGSWE----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELKR 407
AP +W+ A++I+TGTKL+ISNL YGVS EDIK+LFS VG++KR
Sbjct: 54 APETTWQHDMFADPSSGFLVQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKR 113
Query: 408 YDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPAP 587
+ +HYD+SGRSK TA+VVF+RR+DA AA+KKYNNVQLDGKPMKIEIVG NIS+ A P
Sbjct: 114 HGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTA 173
Query: 588 VI----------VNRNPXXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLDAELDKYHTEA 737
+ + P EKVSA+DLDA+L+KYH E+
Sbjct: 174 AVNPFENSNGAPRRQQGRGGPPSRQRGHGFGRGRGRGRGPSEKVSAEDLDADLEKYHAES 233
Query: 738 MQTN 749
MQ N
Sbjct: 234 MQIN 237
>ref|XP_002864660.1| hypothetical protein ARALYDRAFT_496130 [Arabidopsis lyrata subsp.
lyrata] gi|297310495|gb|EFH40919.1| hypothetical protein
ARALYDRAFT_496130 [Arabidopsis lyrata subsp. lyrata]
Length = 239
Score = 180 bits (457), Expect = 7e-43
Identities = 111/247 (44%), Positives = 139/247 (56%), Gaps = 29/247 (11%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MS +DMSLDD+I KN++S+ N R+ R+APY +AK
Sbjct: 1 MSTGLDMSLDDMIAKNRKSRGGAGPARGTGPGPTRRN-----NPNRKSTRSAPYQSAK-- 53
Query: 276 APHGSW--------------EAATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELKRYD 413
AP +W ++ IETGTKL+ISNL YGV EDIK+LF+ VGELKRY
Sbjct: 54 APESTWGHDMFSDRSEDFPPRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYT 113
Query: 414 VHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPAPVI 593
VH+DRSGRSK TA+VV++RR DA AA+KKYN+VQLDGKPMKIEIVG N+ + AAAP+
Sbjct: 114 VHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQT-AAAPSGRP 172
Query: 594 VNRN---------------PXXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLDAELDKYH 728
N N P EK+SA+DLDA+LDKYH
Sbjct: 173 ANGNSNGAPWRGGQGRGGQQRGGGRGGGARGGGGRGRRPGKGPAEKISAEDLDADLDKYH 232
Query: 729 TEAMQTN 749
+ M+TN
Sbjct: 233 SGDMETN 239
>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
Length = 240
Score = 180 bits (456), Expect = 9e-43
Identities = 114/245 (46%), Positives = 136/245 (55%), Gaps = 28/245 (11%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
M+N +DMSLDDLIK N++S R NR APYS VQ
Sbjct: 1 MTNPLDMSLDDLIKSNRKSGLTRTRPPLNSGNGPSRRFP-----NRAANRTAPYSKP-VQ 54
Query: 276 APHGSWE----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELKR 407
AP +W+ A+SIETGTKL+ISNL YGVS EDIK+LFS VG++KR
Sbjct: 55 APDTTWQHDMFVDDGAGFPSAAGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGDMKR 114
Query: 408 YDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISS-LAAAPA 584
Y VHYDRSGRSK TA+VVF+RR DA+ A K+YN VQLDGKPMKIEIVG N+++ +A PA
Sbjct: 115 YSVHYDRSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIVGTNVATPVALPPA 174
Query: 585 PVIVNRNPXXXXXXXXXXXXXXXXXXXXXXPV-----------EKVSAKDLDAELDKYHT 731
NP EKVSA+DLDA+L+ YH
Sbjct: 175 TNGKFANPNGVPRSGQGRGSFSGRSRGPGRGARRGRGQGRGQGEKVSAEDLDADLENYHK 234
Query: 732 EAMQT 746
EAMQT
Sbjct: 235 EAMQT 239
>ref|NP_851229.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|22531190|gb|AAM97099.1| transcriptional
coactivator-like protein [Arabidopsis thaliana]
gi|23198018|gb|AAN15536.1| transcriptional
coactivator-like protein [Arabidopsis thaliana]
gi|332009871|gb|AED97254.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 244
Score = 180 bits (456), Expect = 9e-43
Identities = 111/248 (44%), Positives = 139/248 (56%), Gaps = 30/248 (12%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MS +DMSLDD+I KN++S+ N R+ R+APY +AK
Sbjct: 1 MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSGPGPTRRN-NPNRKSTRSAPYQSAK-- 57
Query: 276 APHGSW---------------EAATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELKRY 410
AP +W ++ IETGTKL+ISNL YGV EDIK+LF+ VGELKRY
Sbjct: 58 APESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRY 117
Query: 411 DVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPAPV 590
VH+DRSGRSK TA+VV++RR DA AA+KKYN+VQLDGKPMKIEIVG N+ + AAAP+
Sbjct: 118 TVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQT-AAAPSGR 176
Query: 591 IVNRN---------------PXXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLDAELDKY 725
N N P EK+SA+DLDA+LDKY
Sbjct: 177 PANGNSNGAPWRGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKY 236
Query: 726 HTEAMQTN 749
H+ M+TN
Sbjct: 237 HSGDMETN 244
>gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023569|gb|ESW22299.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
Length = 245
Score = 179 bits (455), Expect = 1e-42
Identities = 116/255 (45%), Positives = 141/255 (55%), Gaps = 37/255 (14%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRGNRAAPYSTAKVQ 275
MS A+DM+LDD+IK NK+S R GNR APY+ AK
Sbjct: 1 MSAALDMTLDDIIKNNKKSASANTRGRGRASGPGPARRLP----NRAGNRPAPYAAAK-- 54
Query: 276 APHGSWE------------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGEL 401
AP +W+ A+SIETGTKL+ISNL YGVS +DIK+LF VG+L
Sbjct: 55 APESAWQHDMYADQGVATAFAGQGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDL 114
Query: 402 KRYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAP 581
KR+ VHYDRSGRSK TA+VVF+RR DA AA+K+Y+NVQLDGKPMK+EIVG NI++ AA P
Sbjct: 115 KRHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAVP 174
Query: 582 APV-------------------IVNRNPXXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDL 704
PV ++ R EKVSA+DL
Sbjct: 175 -PVNGTFGNSGGPPRSGQGRSGLLGRPRGAPRGRGSSRRGRGGRGRDRD---EKVSAEDL 230
Query: 705 DAELDKYHTEAMQTN 749
DAEL+KYH EAMQ N
Sbjct: 231 DAELEKYHAEAMQLN 245
>ref|XP_006279678.1| hypothetical protein CARUB_v10026991mg [Capsella rubella]
gi|482548382|gb|EOA12576.1| hypothetical protein
CARUB_v10026991mg [Capsella rubella]
Length = 252
Score = 179 bits (455), Expect = 1e-42
Identities = 113/254 (44%), Positives = 139/254 (54%), Gaps = 36/254 (14%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXX--NFKRRGNRAAPYSTAK 269
MS +DMSLDD+I KN++S+ N R+ NR+APY +AK
Sbjct: 1 MSTGLDMSLDDMIAKNRKSRGGGAGPARGSGSGSGSGPGPTRRNNPNRKSNRSAPYQSAK 60
Query: 270 VQAPHGSW-----------------EAATSIETGTKLFISNLHYGVSTEDIKDLFSTVGE 398
AP SW ++ IETGTKL+ISNL YGV +DIK+LF+ VGE
Sbjct: 61 --APESSWGHDMFSDSAEAFPPRSSRSSAGIETGTKLYISNLDYGVMNDDIKELFAEVGE 118
Query: 399 LKRYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAA- 575
LKRY VH+DRSGRSK TA+VVF+RR DA AA+KKYN+VQLDGKPMKIEIVG N+ + AA
Sbjct: 119 LKRYTVHFDRSGRSKGTAEVVFSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAAAQ 178
Query: 576 --APAPVIVN--------------RNPXXXXXXXXXXXXXXXXXXXXXXPVEKVSAKDLD 707
PA N R P EK+SA+DLD
Sbjct: 179 SGRPANGNSNGAPWRGGQGRGGQQRGGGRGGRGGGGRGGGGRGRRPGKGPAEKISAEDLD 238
Query: 708 AELDKYHTEAMQTN 749
A+LDKYH+ M+TN
Sbjct: 239 ADLDKYHSGDMETN 252
>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 179 bits (455), Expect = 1e-42
Identities = 113/244 (46%), Positives = 141/244 (57%), Gaps = 26/244 (10%)
Frame = +3
Query: 96 MSNAIDMSLDDLIKKNKQSKXXXXXXXXXXXXXXXXXXXXXXNFKRRG-NRAAPYSTAKV 272
M+ +DMSLDD+IK NK+S F+ RG NRA PYST+K
Sbjct: 1 MAEPLDMSLDDIIKNNKKS----GSSNFRARGGASSGPGPSRRFRNRGLNRATPYSTSK- 55
Query: 273 QAPHGSWE----------------AATSIETGTKLFISNLHYGVSTEDIKDLFSTVGELK 404
AP +W A++IETGTKL++SNL YGVS EDIK+LFS VG++K
Sbjct: 56 -APETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVK 114
Query: 405 RYDVHYDRSGRSKETADVVFARRVDASAAIKKYNNVQLDGKPMKIEIVGKNISSLAAAPA 584
RY ++YD+SGRSK TA++VF+R+ DA AAIK+YNNVQLDGKPMK+EIVG NI + A PA
Sbjct: 115 RYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVT-PAVPA 173
Query: 585 PVIVN-RNPXXXXXXXXXXXXXXXXXXXXXXP--------VEKVSAKDLDAELDKYHTEA 737
P + NP EK+SA+DLDA+LDKYH EA
Sbjct: 174 PSNASFGNPNGFPRGGRAMGRNRGGGRGRSGSGSGSGRGHGEKLSAEDLDADLDKYHEEA 233
Query: 738 MQTN 749
MQ N
Sbjct: 234 MQIN 237