BLASTX nr result
ID: Rheum21_contig00020830
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00020830
(299 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsi... 80 4e-13
ref|XP_006364813.1| PREDICTED: uncharacterized protein LOC102593... 77 2e-12
gb|EPS71134.1| hypothetical protein M569_03628, partial [Genlise... 77 3e-12
gb|EMJ21646.1| hypothetical protein PRUPE_ppa015108mg [Prunus pe... 77 3e-12
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 77 3e-12
ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266... 76 4e-12
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 76 4e-12
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera] 76 5e-12
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] 76 5e-12
ref|XP_004293094.1| PREDICTED: uncharacterized protein LOC101291... 75 7e-12
ref|XP_004244341.1| PREDICTED: uncharacterized protein LOC101263... 75 7e-12
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] 75 7e-12
emb|CAN66188.1| hypothetical protein VITISV_006046 [Vitis vinifera] 75 7e-12
emb|CAN66054.1| hypothetical protein VITISV_009511 [Vitis vinifera] 75 7e-12
ref|XP_006366879.1| PREDICTED: uncharacterized protein LOC102587... 75 9e-12
ref|XP_006366878.1| PREDICTED: uncharacterized protein LOC102587... 75 9e-12
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula] 75 9e-12
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera] 75 1e-11
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 74 2e-11
ref|XP_004240202.1| PREDICTED: uncharacterized protein LOC101267... 73 3e-11
>gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|17065314|gb|AAL32811.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|21387147|gb|AAM47977.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 411
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/90 (41%), Positives = 58/90 (64%)
Frame = -1
Query: 272 QVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRIPA 93
+V +N +PL L +SDHPG IV+ +GSN+ SWS +R++L +K KLG++D + P+
Sbjct: 58 KVPDNVDNPLILHSSDHPGLSIVAHVLDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPS 117
Query: 92 TDEEKRAMWIRADYMVRCWIINSMISEIAD 3
D+ +W R + MV+ WI+N + EI D
Sbjct: 118 VDDSTFRIWSRCNSMVKSWILNVVNKEIYD 147
>ref|XP_006364813.1| PREDICTED: uncharacterized protein LOC102593226 [Solanum tuberosum]
Length = 384
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/95 (37%), Positives = 53/95 (55%)
Frame = -1
Query: 290 TTIRANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDE 111
T + + + DP FL SD PG +V+T F+G F W + +AL +K KLG+ID
Sbjct: 12 TVVASGSATMDSNDPFFLHPSDSPGMILVNTVFDGHGFAGWKRALLIALSAKNKLGFIDG 71
Query: 110 TCRIPATDEEKRAMWIRADYMVRCWIINSMISEIA 6
+C+ PAT +W R + MV W++NS+ E A
Sbjct: 72 SCKSPATGSSNLRLWNRCNDMVTSWLLNSLSKETA 106
>gb|EPS71134.1| hypothetical protein M569_03628, partial [Genlisea aurea]
Length = 217
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = -1
Query: 251 DPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRIPATDEEKRA 72
DPL+LS SDHP + +VS N+ +W GVR+ALG+K KLG ID P + +
Sbjct: 9 DPLYLSGSDHPNASLVSELLTTRNYFTWRRGVRLALGAKNKLGMIDGDLPKPEQNHPTFS 68
Query: 71 MWIRADYMVRCWIINSMISEI 9
W+R DYM+ W++NS+ ++
Sbjct: 69 QWVRTDYMIISWLLNSISKDL 89
>gb|EMJ21646.1| hypothetical protein PRUPE_ppa015108mg [Prunus persica]
Length = 140
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = -1
Query: 275 NQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRIP 96
N+ KNN DP FL +SDHPG ++S +G N+++W + ++L +K KLG+ID + ++P
Sbjct: 7 NEGKNNAVDPFFLYHSDHPGLVLISKPLSGDNYSTWCQAMTISLNAKSKLGFIDGSIKMP 66
Query: 95 --ATDEEKRAMWIRADYMVRCWIINSMISEIAD 3
+ + A W R + M+ WI+NS+ ++AD
Sbjct: 67 FAKSRPDDHASWRRCNDMILSWILNSITPDLAD 99
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 76.6 bits (187), Expect = 3e-12
Identities = 31/80 (38%), Positives = 53/80 (66%)
Frame = -1
Query: 248 PLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRIPATDEEKRAM 69
PLF+ N+DHPG Q++S +GSN+ W+ +++AL +K K+G++D T P T + +
Sbjct: 14 PLFMHNADHPGLQLISLKLDGSNYDDWNAAMKIALDAKNKIGFVDGTLTRPDTSDPTFRL 73
Query: 68 WIRADYMVRCWIINSMISEI 9
W R + MV+ W++NS+ +I
Sbjct: 74 WSRCNSMVKSWLLNSVSPQI 93
>ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266877 [Solanum
lycopersicum]
Length = 1537
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = -1
Query: 263 NNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRIPATDE 84
N+ L++ SD+PG +V F+G+ + SW GV AL K KLG+ID +C P +
Sbjct: 60 NDTNGVLYVHPSDNPGMMLVPVQFDGTGYRSWRRGVMRALSVKNKLGFIDGSCEKPNNNP 119
Query: 83 EKRAMWIRADYMVRCWIINSMISEIAD 3
+ W R D MV WI+NS+I EI+D
Sbjct: 120 SQLRQWQRCDDMVTSWILNSLIKEISD 146
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = -1
Query: 248 PLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRIPATDEEKRAM 69
PLFL N+DHPG IVS +G+N+ WS +++AL +K K+ +ID +C P +
Sbjct: 53 PLFLHNADHPGISIVSVQLDGANYNQWSSAMKIALDAKNKIAFIDGSCPRPEEGNHLLRI 112
Query: 68 WIRADYMVRCWIINSMISEI 9
W R + MV+ WI+NS+ EI
Sbjct: 113 WSRCNSMVKSWILNSVNREI 132
>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
Length = 970
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = -1
Query: 248 PLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRIPATDEEKRAM 69
P FL N DHPG +VS H G+N+ +WS + MAL +K K+ +ID + P +D+
Sbjct: 27 PYFLHNLDHPGIVLVSHHLTGANYNTWSRAMVMALTAKNKISFIDGSIPCPESDDLLFGT 86
Query: 68 WIRADYMVRCWIINSMISEIAD 3
WIR + MV WI+NS+ +IAD
Sbjct: 87 WIRCNSMVISWILNSVHKDIAD 108
>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
Length = 1059
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = -1
Query: 278 ANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRI 99
+N K + +P FL +SDHPG +VS NG N+++W + ++L +K KLG+ID T +
Sbjct: 7 SNGXKLDAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTM 66
Query: 98 P-ATDE-EKRAMWIRADYMVRCWIINSMISEIAD 3
P ATD+ ++ A W + + M+ WI+NS+ ++AD
Sbjct: 67 PSATDKPBEHASWKKCNDMILSWILNSLSQDLAD 100
>ref|XP_004293094.1| PREDICTED: uncharacterized protein LOC101291796 [Fragaria vesca
subsp. vesca]
Length = 366
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = -1
Query: 278 ANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRI 99
A+ K +P F+ +SDHPG +VS NG NF+ W + AL S KLG+++ + +
Sbjct: 38 ADPFKAEPSNPYFIHHSDHPGLVLVSKLLNGDNFSGWKRSMVRALNSNNKLGFVNGSIKA 97
Query: 98 PA--TDEEKRAMWIRADYMVRCWIINSMISEIAD 3
P+ TD E A+W R + MV WI+NS EIAD
Sbjct: 98 PSEETDPEGYAIWSRCNDMVHSWIVNSCDPEIAD 131
>ref|XP_004244341.1| PREDICTED: uncharacterized protein LOC101263436 [Solanum
lycopersicum]
Length = 387
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = -1
Query: 248 PLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRIPATDEEKRAM 69
PL++ SD+PG+ +VS F+G + SW GV +L K KLG+I+ C PA+ +
Sbjct: 22 PLYMHPSDNPGAMLVSNLFDGVGYRSWRRGVLRSLSVKNKLGFINGECEKPASSSPNFRL 81
Query: 68 WIRADYMVRCWIINSMISEIAD 3
W R D MV WI+NS+ EIAD
Sbjct: 82 WERCDNMVTSWILNSLGKEIAD 103
>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
Length = 1279
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = -1
Query: 278 ANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRI 99
+N K + +P FL +SDHPG +VS NG N+++W + ++L +K KLG+ID T +
Sbjct: 7 SNGGKLDAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTM 66
Query: 98 P-ATDE-EKRAMWIRADYMVRCWIINSMISEIAD 3
P ATD+ ++ A W + + M+ WI+NS+ ++AD
Sbjct: 67 PSATDKPDEHASWKKCNDMILSWILNSLSQDLAD 100
>emb|CAN66188.1| hypothetical protein VITISV_006046 [Vitis vinifera]
Length = 225
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = -1
Query: 278 ANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRI 99
+N K + +P FL +SDHPG +VS NG N+++W + ++L +K KLG+ID T +
Sbjct: 16 SNGGKLDAANPYFLHHSDHPGMVLVSKPLNGENYSTWCRAMTISLNAKSKLGFIDGTTTM 75
Query: 98 P-ATDE-EKRAMWIRADYMVRCWIINSMISEIAD 3
P ATD+ ++ A W + + M+ WI+NS+ ++AD
Sbjct: 76 PSATDKPDEHASWKKCNDMILSWILNSLSQDLAD 109
>emb|CAN66054.1| hypothetical protein VITISV_009511 [Vitis vinifera]
Length = 175
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Frame = -1
Query: 293 ETTIRANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYID 114
++ I N K + +P F +SDHPG ++S NG N+++W + +AL SK KLG+++
Sbjct: 3 KSEIPTNFSKADLSNPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFVN 62
Query: 113 ETCRIPA--TDEEKRAMWIRADYMVRCWIINSMISEIAD 3
+ + P+ D E A W R + MV WI+N++ EIAD
Sbjct: 63 GSIKAPSEEIDPEGYATWSRCNDMVHSWIVNTLNPEIAD 101
>ref|XP_006366879.1| PREDICTED: uncharacterized protein LOC102587048 isoform X2 [Solanum
tuberosum]
Length = 384
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/95 (38%), Positives = 53/95 (55%)
Frame = -1
Query: 290 TTIRANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDE 111
T I + + DP FL SD PG +V+T F+G F W + +AL +K KLG+ID
Sbjct: 12 TVIASGSPTMDSNDPFFLHPSDSPGMILVNTIFDGHGFAGWKRALLIALSAKNKLGFIDG 71
Query: 110 TCRIPATDEEKRAMWIRADYMVRCWIINSMISEIA 6
+C+ PA +W R + MV W++NS+ EIA
Sbjct: 72 SCKSPAAGSINLRLWNRYNDMVTSWLLNSLSKEIA 106
>ref|XP_006366878.1| PREDICTED: uncharacterized protein LOC102587048 isoform X1 [Solanum
tuberosum]
Length = 435
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/95 (38%), Positives = 53/95 (55%)
Frame = -1
Query: 290 TTIRANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDE 111
T I + + DP FL SD PG +V+T F+G F W + +AL +K KLG+ID
Sbjct: 12 TVIASGSPTMDSNDPFFLHPSDSPGMILVNTIFDGHGFAGWKRALLIALSAKNKLGFIDG 71
Query: 110 TCRIPATDEEKRAMWIRADYMVRCWIINSMISEIA 6
+C+ PA +W R + MV W++NS+ EIA
Sbjct: 72 SCKSPAAGSINLRLWNRYNDMVTSWLLNSLSKEIA 106
>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
Length = 1157
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/93 (34%), Positives = 54/93 (58%)
Frame = -1
Query: 284 IRANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETC 105
+R N +N P ++ SD P S I++ NGSN+ +W ++ ALG+K KL ++D +
Sbjct: 2 VRGNSAPSNSDSPYYIHPSDGPSSLIITPKLNGSNYLAWHRSMQRALGAKNKLVFLDGSI 61
Query: 104 RIPATDEEKRAMWIRADYMVRCWIINSMISEIA 6
+P D+ R W R ++++ WI+NS+ IA
Sbjct: 62 SVPDIDDLNRQAWERCNHLIHSWIVNSVTESIA 94
>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
Length = 1236
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/94 (38%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = -1
Query: 278 ANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRI 99
+N K + +P FL +SDHPG ++S NG N+ +W + ++L +K KLG+ID T +
Sbjct: 7 SNGGKLDAANPYFLHHSDHPGIVLISKPLNGDNYWTWCRAMTISLNAKSKLGFIDGTTTM 66
Query: 98 P-ATDE-EKRAMWIRADYMVRCWIINSMISEIAD 3
P ATD+ ++ A+W + + M+ WI+NS+ ++AD
Sbjct: 67 PSATDKPDEHALWKKCNDMILSWILNSLSQDLAD 100
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = -1
Query: 296 KETTIRANQVKNNYGDPLFLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYI 117
+++ I N K + +P F +SDHPG ++S NG N+++W + +AL SK KLG++
Sbjct: 2 EKSEIPTNFSKADLSNPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFV 61
Query: 116 DETCRIPA--TDEEKRAMWIRADYMVRCWIINSMISEIAD 3
+ + + P+ D E A W R + MV WI+N++ EIA+
Sbjct: 62 NGSIKAPSEEIDPEGYATWSRCNDMVHSWIVNTLNPEIAN 101
>ref|XP_004240202.1| PREDICTED: uncharacterized protein LOC101267997 [Solanum
lycopersicum]
Length = 811
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = -1
Query: 242 FLSNSDHPGSQIVSTHFNGSNFTSWS*GVRMALGSKMKLGYIDETCRIPATDEEKRAMWI 63
++ SD+PG+ +V T F+G + SW G+ AL K K G+ID C PA + + W
Sbjct: 20 YVHPSDNPGTPLVPTQFDGVGYRSWRRGILRALSVKNKTGFIDGNCAKPAENSPQARQWQ 79
Query: 62 RADYMVRCWIINSMISEIAD 3
R D MV WI+NS+ EIAD
Sbjct: 80 RCDDMVTSWILNSLTKEIAD 99