BLASTX nr result

ID: Rheum21_contig00020815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020815
         (479 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA21920.1| ZPT2-11 [Petunia x hybrida]                            63   4e-08
ref|XP_002267645.1| PREDICTED: zinc finger protein ZAT5 [Vitis v...    61   1e-07
ref|XP_006354388.1| PREDICTED: zinc finger protein ZAT5-like [So...    60   2e-07
gb|EOY07971.1| Nucleic acid binding protein, putative [Theobroma...    60   2e-07
gb|ESW34788.1| hypothetical protein PHAVU_001G181200g [Phaseolus...    60   4e-07
ref|XP_002323497.1| hypothetical protein POPTR_0016s10790g [Popu...    58   1e-06
ref|XP_006493540.1| PREDICTED: zinc finger protein ZAT5-like [Ci...    57   3e-06
ref|XP_006428462.1| hypothetical protein CICLE_v10012395mg [Citr...    57   3e-06
ref|XP_002519455.1| nucleic acid binding protein, putative [Rici...    57   3e-06
ref|NP_195971.1| C2H2-type zinc finger protein [Arabidopsis thal...    55   7e-06
ref|XP_003554400.1| PREDICTED: zinc finger protein ZAT5-like [Gl...    55   1e-05

>dbj|BAA21920.1| ZPT2-11 [Petunia x hybrida]
          Length = 282

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 37/77 (48%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
 Frame = +2

Query: 2   GGHMRRHRPLVTGGGSAPATQEPPRNLQ-------LCLDLNLPAEEEAQDPETPKFLFGS 160
           GGHMRRHRPL      A  + E   + +       L LDLNLPA E+   PET KF F S
Sbjct: 207 GGHMRRHRPLPNSIAIASTSHELESSHEIKNTRNFLSLDLNLPAPEDDHRPET-KFSFAS 265

Query: 161 NENTLVFTAGSLVDCRY 211
            E  +VF+A  LVDC Y
Sbjct: 266 KEQVIVFSASPLVDCHY 282


>ref|XP_002267645.1| PREDICTED: zinc finger protein ZAT5 [Vitis vinifera]
           gi|147788170|emb|CAN64839.1| hypothetical protein
           VITISV_030377 [Vitis vinifera]
          Length = 276

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/78 (50%), Positives = 46/78 (58%), Gaps = 8/78 (10%)
 Frame = +2

Query: 2   GGHMRRHR------PLVTGGGSAPATQEP--PRNLQLCLDLNLPAEEEAQDPETPKFLFG 157
           GGHMRRHR      P +    S+P +QE   PRN+ L LDLNLPA E+  D    KF F 
Sbjct: 202 GGHMRRHRTFTGPPPTMPMATSSPESQEAKKPRNI-LQLDLNLPAPED--DHRESKFPFA 258

Query: 158 SNENTLVFTAGSLVDCRY 211
           + E  LVF+A  LVDC Y
Sbjct: 259 TKEQALVFSASPLVDCHY 276


>ref|XP_006354388.1| PREDICTED: zinc finger protein ZAT5-like [Solanum tuberosum]
          Length = 307

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/84 (42%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
 Frame = +2

Query: 2   GGHMRRHRPLVTG------------GGSAPATQEPPRNLQ--LCLDLNLPAEEEAQDPET 139
           GGHMRRHRPL                 S    Q+   N +  L LDLNLPA E+   PE 
Sbjct: 224 GGHMRRHRPLPNSIAIASNHHIHEESDSHHHDQQIKNNTRTFLSLDLNLPAPEDDHRPEN 283

Query: 140 PKFLFGSNENTLVFTAGSLVDCRY 211
            KF F + E  +VF+A  LVDC Y
Sbjct: 284 SKFTFATKEQVIVFSASPLVDCHY 307


>gb|EOY07971.1| Nucleic acid binding protein, putative [Theobroma cacao]
          Length = 288

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 42/83 (50%), Positives = 47/83 (56%), Gaps = 13/83 (15%)
 Frame = +2

Query: 2   GGHMRRHR-----PLVTG------GGSAPATQEP--PRNLQLCLDLNLPAEEEAQDPETP 142
           GGHMRRHR     P  T       G  +P +QE   PR + L LDLNLPA E+    ET 
Sbjct: 208 GGHMRRHRTFTNVPTTTATTALSVGTRSPESQESKKPRTV-LQLDLNLPAPEDDHHRET- 265

Query: 143 KFLFGSNENTLVFTAGSLVDCRY 211
           KF F S E  LVF+A SLVDC Y
Sbjct: 266 KFSFASKEKLLVFSASSLVDCHY 288


>gb|ESW34788.1| hypothetical protein PHAVU_001G181200g [Phaseolus vulgaris]
          Length = 353

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
 Frame = +2

Query: 2   GGHMRRHRPLVT---------GGGSAPATQEPPRNLQ-LCLDLNLPAEEEAQDPETPKFL 151
           GGHMRRHR  V+         GG  +P   E  ++   L LDLNLPA E+    E+  F 
Sbjct: 274 GGHMRRHRNFVSAPTSGTIAYGGDGSPEIPETKKHKDVLNLDLNLPAPEDDHHRESNLFP 333

Query: 152 FGSNENTLVFTAGSLVDCRY 211
           F S E  +VF+A SLVDC Y
Sbjct: 334 FQSKEKVIVFSATSLVDCHY 353


>ref|XP_002323497.1| hypothetical protein POPTR_0016s10790g [Populus trichocarpa]
           gi|222868127|gb|EEF05258.1| hypothetical protein
           POPTR_0016s10790g [Populus trichocarpa]
          Length = 295

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/87 (44%), Positives = 46/87 (52%), Gaps = 17/87 (19%)
 Frame = +2

Query: 2   GGHMRRHR---PLVTGGGSAPATQ--------------EPPRNLQLCLDLNLPAEEEAQD 130
           GGHMRRHR   P  T   +   ++              + PR++QL LDLNLPA E+  D
Sbjct: 212 GGHMRRHRAFAPTTTATATTLTSRSLERSKPDHESEESKKPRDIQL-LDLNLPAAED--D 268

Query: 131 PETPKFLFGSNENTLVFTAGSLVDCRY 211
               KF F S E  LVFTA SLVDC Y
Sbjct: 269 LRESKFHFASKEQVLVFTASSLVDCHY 295


>ref|XP_006493540.1| PREDICTED: zinc finger protein ZAT5-like [Citrus sinensis]
          Length = 300

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
 Frame = +2

Query: 2   GGHMRRHRPLVTG------GGSAPATQEP-----PRNLQLCLDLNLPAEEEAQDPETPKF 148
           GGHMRRHR   T       G S+   ++      PRN+ L LDLNLPA E+  D    KF
Sbjct: 223 GGHMRRHRAFTTSTTALSMGTSSSLDRQSQQAKKPRNI-LQLDLNLPAPED--DRRESKF 279

Query: 149 LFGSNENTLVFTAGSLVDCRY 211
            F S E  ++F+A  LVDC Y
Sbjct: 280 AFASKEQVIIFSASPLVDCHY 300


>ref|XP_006428462.1| hypothetical protein CICLE_v10012395mg [Citrus clementina]
           gi|557530519|gb|ESR41702.1| hypothetical protein
           CICLE_v10012395mg [Citrus clementina]
          Length = 285

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
 Frame = +2

Query: 2   GGHMRRHRPLVTG------GGSAPATQEP-----PRNLQLCLDLNLPAEEEAQDPETPKF 148
           GGHMRRHR   T       G S+   ++      PRN+ L LDLNLPA E+  D    KF
Sbjct: 208 GGHMRRHRAFTTSTTALSMGTSSSLDRQSQQAKKPRNI-LQLDLNLPAPED--DRRESKF 264

Query: 149 LFGSNENTLVFTAGSLVDCRY 211
            F S E  ++F+A  LVDC Y
Sbjct: 265 AFASKEQVIIFSASPLVDCHY 285


>ref|XP_002519455.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223541318|gb|EEF42869.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 320

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/90 (42%), Positives = 45/90 (50%), Gaps = 20/90 (22%)
 Frame = +2

Query: 2   GGHMRRHRP--------------------LVTGGGSAPATQEPPRNLQLCLDLNLPAEEE 121
           GGHMRRHR                     LVT       T++P RN  L LDLNLPA E+
Sbjct: 233 GGHMRRHRAAFDTTSTRTITPPPPPKTVSLVTSSPEFQETKKPRRN-SLQLDLNLPAPED 291

Query: 122 AQDPETPKFLFGSNENTLVFTAGSLVDCRY 211
             + E+ KF F S E  LVF++  LVDC Y
Sbjct: 292 HDNRES-KFHFASKEQVLVFSSSPLVDCHY 320


>ref|NP_195971.1| C2H2-type zinc finger protein [Arabidopsis thaliana]
           gi|7378636|emb|CAB83312.1| putative protein [Arabidopsis
           thaliana] gi|51971385|dbj|BAD44357.1| unknown protein
           [Arabidopsis thaliana] gi|225898883|dbj|BAH30572.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332003233|gb|AED90616.1| C2H2-type zinc finger
           protein [Arabidopsis thaliana]
          Length = 292

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 16/86 (18%)
 Frame = +2

Query: 2   GGHMRRHRPLVTGGGSAPATQEP--------------PRNLQLCLDLNLPAEEEAQDPET 139
           GGHMRRHR L     +  A +                P+N  L LDLNLPA E+ +  E 
Sbjct: 208 GGHMRRHRGLTINANATSAIKTAISSSSHHHHEESIRPKNF-LQLDLNLPAPEDERCCEK 266

Query: 140 PKFLFGSNENTLVFTA--GSLVDCRY 211
           PKF F S +  L+FTA   SL+DC +
Sbjct: 267 PKFAFASKDQILLFTAASNSLIDCHH 292


>ref|XP_003554400.1| PREDICTED: zinc finger protein ZAT5-like [Glycine max]
          Length = 286

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
 Frame = +2

Query: 2   GGHMRRHR-----PLV------TGGGSAPATQEPPRNLQ-LCLDLNLPAEEEAQDPETPK 145
           GGHMR+HR     P++       GG  +P   E  ++   L LDLNLPA E+    E+  
Sbjct: 205 GGHMRKHRNFLSAPIIGAINIANGGDGSPKVPEAKKHKDVLNLDLNLPAPEDDHLRESNL 264

Query: 146 FLFGSNENTLVFTAGSLVDCRY 211
           F F + E  +VF+A SLVDC Y
Sbjct: 265 FPFQAKEKVIVFSATSLVDCHY 286


Top