BLASTX nr result
ID: Rheum21_contig00020620
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00020620
(298 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853... 114 1e-23
ref|XP_004304332.1| PREDICTED: uncharacterized protein LOC101304... 110 2e-22
ref|XP_002322496.2| hypothetical protein POPTR_0015s12710g [Popu... 109 3e-22
ref|XP_004145862.1| PREDICTED: nibrin-like [Cucumis sativus] 108 6e-22
gb|EMJ02895.1| hypothetical protein PRUPE_ppa004302mg [Prunus pe... 107 1e-21
ref|XP_003544952.1| PREDICTED: nibrin-like isoform X1 [Glycine m... 106 4e-21
ref|XP_006363212.1| PREDICTED: nibrin-like [Solanum tuberosum] 105 5e-21
ref|XP_002525874.1| Nibrin, putative [Ricinus communis] gi|22353... 105 6e-21
ref|XP_006481328.1| PREDICTED: nibrin-like [Citrus sinensis] 103 2e-20
ref|XP_006429739.1| hypothetical protein CICLE_v10012792mg [Citr... 103 2e-20
ref|XP_004232654.1| PREDICTED: nibrin-like isoform 2 [Solanum ly... 102 4e-20
ref|XP_004232653.1| PREDICTED: nibrin-like isoform 1 [Solanum ly... 102 4e-20
ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb... 102 4e-20
gb|ESW13980.1| hypothetical protein PHAVU_008G242800g [Phaseolus... 102 5e-20
ref|XP_006408393.1| hypothetical protein EUTSA_v10020468mg [Eutr... 100 3e-19
ref|XP_006299365.1| hypothetical protein CARUB_v10015532mg [Caps... 97 2e-18
gb|ABK59968.1| NBS1 [Arabidopsis thaliana] 97 2e-18
ref|NP_186917.2| nijmegen breakage syndrome 1 protein [Arabidops... 97 2e-18
ref|XP_002882246.1| hypothetical protein ARALYDRAFT_477508 [Arab... 97 3e-18
gb|EOY03071.1| Nijmegen breakage syndrome 1, putative isoform 4 ... 87 2e-15
>ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853048 [Vitis vinifera]
gi|296083807|emb|CBI24024.3| unnamed protein product
[Vitis vinifera]
Length = 595
Score = 114 bits (285), Expect = 1e-23
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPLSGE+ YYI AKGTYKVGRKGCDV + KDKGVSR+H+EI+VD+M LD +
Sbjct: 1 MVWGLFPVDPLSGEDSYYIFAKGTYKVGRKGCDVIVKKDKGVSRIHAEIIVDSMISLDPQ 60
Query: 250 EKKCTDMSTKVRIRDC 297
K +++S+ VRIRDC
Sbjct: 61 WNKSSNVSSNVRIRDC 76
>ref|XP_004304332.1| PREDICTED: uncharacterized protein LOC101304895 [Fragaria vesca
subsp. vesca]
Length = 518
Score = 110 bits (275), Expect = 2e-22
Identities = 52/76 (68%), Positives = 61/76 (80%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWG P DPLSGE+ YYI A+GTYKVGRKGCDV I +DKGVSRVH+EIVVD+M R
Sbjct: 1 MVWGFFPADPLSGEDTYYIFARGTYKVGRKGCDVNIAEDKGVSRVHAEIVVDSMVSALPR 60
Query: 250 EKKCTDMSTKVRIRDC 297
+ K + +S+KVRIRDC
Sbjct: 61 QTKSSVLSSKVRIRDC 76
>ref|XP_002322496.2| hypothetical protein POPTR_0015s12710g [Populus trichocarpa]
gi|550322593|gb|EEF06623.2| hypothetical protein
POPTR_0015s12710g [Populus trichocarpa]
Length = 517
Score = 109 bits (273), Expect = 3e-22
Identities = 50/76 (65%), Positives = 59/76 (77%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPLSGE+KYYI KG YKVGRKGCDV I KDKGVSR+H+E+VVD M +DH
Sbjct: 1 MVWGLFPVDPLSGEDKYYIFTKGVYKVGRKGCDVIICKDKGVSRIHAELVVDEMISMDHP 60
Query: 250 EKKCTDMSTKVRIRDC 297
+D+ ++V IRDC
Sbjct: 61 LHMKSDLPSRVLIRDC 76
>ref|XP_004145862.1| PREDICTED: nibrin-like [Cucumis sativus]
Length = 523
Score = 108 bits (271), Expect = 6e-22
Identities = 50/76 (65%), Positives = 60/76 (78%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWG P DPLSGEEK+YI A G YKVGRKGCD+TI KDKGVSR+H+EI+VDAM L+
Sbjct: 1 MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTIAKDKGVSRIHAEILVDAMISLNSH 60
Query: 250 EKKCTDMSTKVRIRDC 297
+++S+KVRI DC
Sbjct: 61 NSHLSNISSKVRISDC 76
>gb|EMJ02895.1| hypothetical protein PRUPE_ppa004302mg [Prunus persica]
Length = 517
Score = 107 bits (268), Expect = 1e-21
Identities = 53/76 (69%), Positives = 61/76 (80%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWG P DPLSGE+K+YI A+GTYKVGRKGCDV I KDKGVSRVH+EIVVDAM
Sbjct: 1 MVWGFFPDDPLSGEDKFYIFARGTYKVGRKGCDVNITKDKGVSRVHAEIVVDAMISAP-L 59
Query: 250 EKKCTDMSTKVRIRDC 297
+ K + +S+KVRIRDC
Sbjct: 60 QTKSSILSSKVRIRDC 75
>ref|XP_003544952.1| PREDICTED: nibrin-like isoform X1 [Glycine max]
gi|571511887|ref|XP_006596489.1| PREDICTED: nibrin-like
isoform X2 [Glycine max]
gi|571511894|ref|XP_006596490.1| PREDICTED: nibrin-like
isoform X3 [Glycine max]
Length = 555
Score = 106 bits (264), Expect = 4e-21
Identities = 48/76 (63%), Positives = 58/76 (76%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPLSGE+KYYI G YKVGRKGCDV I KDKGVSRVH+EIVV+ + ++
Sbjct: 1 MVWGLFPVDPLSGEDKYYIFKTGLYKVGRKGCDVIITKDKGVSRVHAEIVVNTVNPVNPL 60
Query: 250 EKKCTDMSTKVRIRDC 297
KC+ +S+ + IRDC
Sbjct: 61 PNKCSHLSSSIHIRDC 76
>ref|XP_006363212.1| PREDICTED: nibrin-like [Solanum tuberosum]
Length = 586
Score = 105 bits (263), Expect = 5e-21
Identities = 49/76 (64%), Positives = 58/76 (76%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPL GE+ YY KGTYKVGRKGCDV + KDKGVSR+H+EI+VD M LD
Sbjct: 1 MVWGLFPIDPLPGEDSYYFFNKGTYKVGRKGCDVIVNKDKGVSRIHAEILVDEMISLDQS 60
Query: 250 EKKCTDMSTKVRIRDC 297
KK +++ KVR+RDC
Sbjct: 61 LKKPSNILFKVRVRDC 76
>ref|XP_002525874.1| Nibrin, putative [Ricinus communis] gi|223534788|gb|EEF36478.1|
Nibrin, putative [Ricinus communis]
Length = 529
Score = 105 bits (262), Expect = 6e-21
Identities = 51/76 (67%), Positives = 60/76 (78%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVW L P DPLSGE+KYYI KGTYKVGRKGCDV I KDKGVSR+H+EI+VD M L+
Sbjct: 1 MVWALFPADPLSGEDKYYIFKKGTYKVGRKGCDVIINKDKGVSRIHAEIIVDEMISLNPM 60
Query: 250 EKKCTDMSTKVRIRDC 297
K +D +++VRIRDC
Sbjct: 61 -KSNSDRTSRVRIRDC 75
>ref|XP_006481328.1| PREDICTED: nibrin-like [Citrus sinensis]
Length = 589
Score = 103 bits (257), Expect = 2e-20
Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPL GE+KYYI +KG YKVGRKGCD+ I KDKGVSRVH+EI+VD M L+
Sbjct: 1 MVWGLFPIDPLPGEDKYYIFSKGNYKVGRKGCDIIINKDKGVSRVHAEILVDEMISLNPF 60
Query: 250 EKKCTDMS-TKVRIRDC 297
+ K + +S T+VRI+DC
Sbjct: 61 QDKSSKVSTTRVRIKDC 77
>ref|XP_006429739.1| hypothetical protein CICLE_v10012792mg [Citrus clementina]
gi|557531796|gb|ESR42979.1| hypothetical protein
CICLE_v10012792mg [Citrus clementina]
Length = 206
Score = 103 bits (257), Expect = 2e-20
Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPL GE+KYYI +KG YKVGRKGCD+ I KDKGVSRVH+EI+VD M L+
Sbjct: 1 MVWGLFPIDPLPGEDKYYIFSKGNYKVGRKGCDIIINKDKGVSRVHAEILVDEMISLNPF 60
Query: 250 EKKCTDMS-TKVRIRDC 297
+ K + +S T+VRI+DC
Sbjct: 61 QDKSSKVSTTRVRIKDC 77
>ref|XP_004232654.1| PREDICTED: nibrin-like isoform 2 [Solanum lycopersicum]
Length = 554
Score = 102 bits (255), Expect = 4e-20
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPL GE+ YY +GTYKVGRKGCDV + KDKGVSR+H+EI+VD M LD +
Sbjct: 1 MVWGLFPIDPLPGEDSYYFFNEGTYKVGRKGCDVIVNKDKGVSRIHAEILVDEMISLD-Q 59
Query: 250 EKKCTDMSTKVRIRDC 297
KK +++ +KVR+RDC
Sbjct: 60 SKKPSNILSKVRVRDC 75
>ref|XP_004232653.1| PREDICTED: nibrin-like isoform 1 [Solanum lycopersicum]
Length = 563
Score = 102 bits (255), Expect = 4e-20
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPL GE+ YY +GTYKVGRKGCDV + KDKGVSR+H+EI+VD M LD +
Sbjct: 1 MVWGLFPIDPLPGEDSYYFFNEGTYKVGRKGCDVIVNKDKGVSRIHAEILVDEMISLD-Q 59
Query: 250 EKKCTDMSTKVRIRDC 297
KK +++ +KVR+RDC
Sbjct: 60 SKKPSNILSKVRVRDC 75
>ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb|AES99064.1| Nibrin
[Medicago truncatula]
Length = 571
Score = 102 bits (255), Expect = 4e-20
Identities = 48/76 (63%), Positives = 57/76 (75%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPLSGE+ YYI GTYKVGRKGCDV + KDKGVSRVH+EIVV+ M L+
Sbjct: 1 MVWGLFPVDPLSGEDNYYIFKPGTYKVGRKGCDVIVTKDKGVSRVHAEIVVNTMNMLNPL 60
Query: 250 EKKCTDMSTKVRIRDC 297
+ +S+ V+IRDC
Sbjct: 61 QNVRRHLSSSVQIRDC 76
>gb|ESW13980.1| hypothetical protein PHAVU_008G242800g [Phaseolus vulgaris]
Length = 557
Score = 102 bits (254), Expect = 5e-20
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPLSGE+ YYI G YKVGRKGCDV I KDKGVSRVH+EI+V+ M ++
Sbjct: 1 MVWGLFPVDPLSGEDNYYIFKTGIYKVGRKGCDVIITKDKGVSRVHAEIIVNKMNLVNPL 60
Query: 250 EKKCTDMSTKVRIRDC 297
+C+ +S + IRDC
Sbjct: 61 PNECSHLSPSIHIRDC 76
>ref|XP_006408393.1| hypothetical protein EUTSA_v10020468mg [Eutrema salsugineum]
gi|557109539|gb|ESQ49846.1| hypothetical protein
EUTSA_v10020468mg [Eutrema salsugineum]
Length = 543
Score = 99.8 bits (247), Expect = 3e-19
Identities = 45/75 (60%), Positives = 55/75 (73%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPLSGE+KYYI +KG YK+GRKGCD+ I KDKGVSRVH+E+ DA R
Sbjct: 1 MVWGLFPVDPLSGEDKYYIFSKGNYKIGRKGCDIIINKDKGVSRVHAELAFDATALSTSR 60
Query: 250 EKKCTDMSTKVRIRD 294
K +D S +R++D
Sbjct: 61 RNKSSDPSFVIRVKD 75
>ref|XP_006299365.1| hypothetical protein CARUB_v10015532mg [Capsella rubella]
gi|482568074|gb|EOA32263.1| hypothetical protein
CARUB_v10015532mg [Capsella rubella]
Length = 541
Score = 97.1 bits (240), Expect = 2e-18
Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPLSGE+KYYI +KG YK+GRKGCD+ I KDKGVSR+H+E+ DA
Sbjct: 1 MVWGLFPVDPLSGEDKYYIFSKGNYKIGRKGCDIIINKDKGVSRIHAELTFDATAVSTSL 60
Query: 250 EKKCTDMST-KVRIRDC 297
K +D S+ +R++DC
Sbjct: 61 RNKSSDTSSFVIRVKDC 77
>gb|ABK59968.1| NBS1 [Arabidopsis thaliana]
Length = 533
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAME-HLDH 246
MVWGL P DPLSGE+KYYI +KG YKVGRKGCD+ I KDKGVSR+H+E+ DA
Sbjct: 1 MVWGLFPVDPLSGEDKYYIFSKGIYKVGRKGCDIIINKDKGVSRIHAELTFDATTVSTSR 60
Query: 247 REKKCTDMST-KVRIRDC 297
R K +D S+ +R++DC
Sbjct: 61 RNKSSSDTSSFVIRVKDC 78
>ref|NP_186917.2| nijmegen breakage syndrome 1 protein [Arabidopsis thaliana]
gi|76782245|gb|ABA54896.1| NBS1 [Arabidopsis thaliana]
gi|332640326|gb|AEE73847.1| nijmegen breakage syndrome 1
protein [Arabidopsis thaliana]
Length = 542
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAME-HLDH 246
MVWGL P DPLSGE+KYYI +KG YKVGRKGCD+ I KDKGVSR+H+E+ DA
Sbjct: 1 MVWGLFPVDPLSGEDKYYIFSKGIYKVGRKGCDIIINKDKGVSRIHAELTFDATTVSTSR 60
Query: 247 REKKCTDMST-KVRIRDC 297
R K +D S+ +R++DC
Sbjct: 61 RNKSSSDTSSFVIRVKDC 78
>ref|XP_002882246.1| hypothetical protein ARALYDRAFT_477508 [Arabidopsis lyrata subsp.
lyrata] gi|297328086|gb|EFH58505.1| hypothetical protein
ARALYDRAFT_477508 [Arabidopsis lyrata subsp. lyrata]
Length = 537
Score = 96.7 bits (239), Expect = 3e-18
Identities = 43/76 (56%), Positives = 55/76 (72%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEEKYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDHR 249
MVWGL P DPLSGE+KYYI +KG YK+GRKGCD+ I KDKGVSR+H+E+ D+ R
Sbjct: 1 MVWGLFPVDPLSGEDKYYIFSKGIYKIGRKGCDIIINKDKGVSRIHAELTFDS---TSRR 57
Query: 250 EKKCTDMSTKVRIRDC 297
+K S +R++DC
Sbjct: 58 DKSSDTSSFVIRVKDC 73
>gb|EOY03071.1| Nijmegen breakage syndrome 1, putative isoform 4 [Theobroma cacao]
Length = 526
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +1
Query: 70 MVWGLIPTDPLSGEE-KYYICAKGTYKVGRKGCDVTIIKDKGVSRVHSEIVVDAMEHLDH 246
MVW L+P DP SGEE KYYI KGTYKVGRKGCD+ + KDKGVSR+H++I+VD M
Sbjct: 1 MVWALLPVDPSSGEEDKYYIFRKGTYKVGRKGCDIIVHKDKGVSRIHADIIVDDM----- 55
Query: 247 REKKCTDMSTKVRIRD 294
S++VRI+D
Sbjct: 56 ------TKSSQVRIKD 65