BLASTX nr result
ID: Rheum21_contig00020543
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00020543
(231 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communi... 113 2e-23
ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein M... 110 2e-22
ref|XP_004135716.1| PREDICTED: WD-40 repeat-containing protein M... 110 2e-22
ref|XP_002282044.2| PREDICTED: WD-40 repeat-containing protein M... 110 2e-22
emb|CBI27909.3| unnamed protein product [Vitis vinifera] 110 2e-22
ref|XP_006409039.1| hypothetical protein EUTSA_v10022653mg [Eutr... 107 2e-21
ref|XP_006451474.1| hypothetical protein CICLE_v10008090mg [Citr... 106 3e-21
ref|XP_006451473.1| hypothetical protein CICLE_v10008090mg [Citr... 106 3e-21
ref|XP_004287561.1| PREDICTED: WD-40 repeat-containing protein M... 106 4e-21
ref|XP_002332825.1| nucleosome/chromatin assembly factor group [... 105 5e-21
gb|AGN88924.1| FVE protein [Litchi chinensis] 105 8e-21
ref|XP_006451472.1| hypothetical protein CICLE_v10008090mg [Citr... 104 1e-20
ref|XP_004488042.1| PREDICTED: WD-40 repeat-containing protein M... 104 1e-20
ref|XP_002886035.1| hypothetical protein ARALYDRAFT_899930 [Arab... 104 1e-20
ref|NP_565456.2| WD-40 repeat-containing protein MSI4 [Arabidops... 104 1e-20
gb|EOY30457.1| Transducin family protein / WD-40 repeat family p... 104 1e-20
gb|AAD10151.2| putative WD-40 repeat protein, MSI4 [Arabidopsis ... 104 1e-20
gb|AAD03340.1| WD-40 repeat protein MSI4 [Arabidopsis thaliana] 103 2e-20
ref|XP_002330494.1| nucleosome/chromatin assembly factor group [... 103 2e-20
gb|AAX47182.1| FVE [Pisum sativum] 101 1e-19
>ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communis]
gi|223546569|gb|EEF48067.1| WD-repeat protein, putative
[Ricinus communis]
Length = 503
Score = 113 bits (283), Expect = 2e-23
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 7/83 (8%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESG- 53
Q+NAEFALAMCPTEP+VLSGGKDKSVV WSIQDH++ASATD +T K P S SI K +G
Sbjct: 205 QDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITASATDPATAKSPGSGGSIIKRAGE 264
Query: 52 ------ESPRIGPRGVFKGHDDT 2
ESP +GPRG+++GH+DT
Sbjct: 265 GNDRAAESPSVGPRGIYQGHEDT 287
>ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cucumis
sativus]
Length = 518
Score = 110 bits (275), Expect = 2e-22
Identities = 55/83 (66%), Positives = 63/83 (75%), Gaps = 7/83 (8%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESGE 50
QENAEFALAMCPTEPYVLSGGKDK VV WSIQDH++ SATD+ +K P S SI K+ GE
Sbjct: 220 QENAEFALAMCPTEPYVLSGGKDKLVVLWSIQDHITTSATDAGASKSPGSGGSIIKKPGE 279
Query: 49 S-------PRIGPRGVFKGHDDT 2
+ P IGPRGV+ GH+DT
Sbjct: 280 ANDKASDGPSIGPRGVYHGHEDT 302
>ref|XP_004135716.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cucumis
sativus]
Length = 512
Score = 110 bits (275), Expect = 2e-22
Identities = 55/83 (66%), Positives = 63/83 (75%), Gaps = 7/83 (8%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESGE 50
QENAEFALAMCPTEPYVLSGGKDK VV WSIQDH++ SATD+ +K P S SI K+ GE
Sbjct: 214 QENAEFALAMCPTEPYVLSGGKDKLVVLWSIQDHITTSATDAGASKSPGSGGSIIKKPGE 273
Query: 49 S-------PRIGPRGVFKGHDDT 2
+ P IGPRGV+ GH+DT
Sbjct: 274 ANDKASDGPSIGPRGVYHGHEDT 296
>ref|XP_002282044.2| PREDICTED: WD-40 repeat-containing protein MSI4 [Vitis vinifera]
Length = 508
Score = 110 bits (275), Expect = 2e-22
Identities = 55/86 (63%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKES-- 56
Q+NAEFALAMCP EP+VLSGGKDKSVV WSIQDH+S ATDS T KPP S SI K +
Sbjct: 207 QDNAEFALAMCPAEPFVLSGGKDKSVVLWSIQDHISTLATDSETTKPPGSGGSIIKSNSN 266
Query: 55 --------GESPRIGPRGVFKGHDDT 2
+SP IGPRG+F GH+DT
Sbjct: 267 PSEGNDKPADSPSIGPRGIFHGHEDT 292
>emb|CBI27909.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 110 bits (275), Expect = 2e-22
Identities = 55/86 (63%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKES-- 56
Q+NAEFALAMCP EP+VLSGGKDKSVV WSIQDH+S ATDS T KPP S SI K +
Sbjct: 168 QDNAEFALAMCPAEPFVLSGGKDKSVVLWSIQDHISTLATDSETTKPPGSGGSIIKSNSN 227
Query: 55 --------GESPRIGPRGVFKGHDDT 2
+SP IGPRG+F GH+DT
Sbjct: 228 PSEGNDKPADSPSIGPRGIFHGHEDT 253
>ref|XP_006409039.1| hypothetical protein EUTSA_v10022653mg [Eutrema salsugineum]
gi|557110201|gb|ESQ50492.1| hypothetical protein
EUTSA_v10022653mg [Eutrema salsugineum]
Length = 510
Score = 107 bits (266), Expect = 2e-21
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESGE 50
Q+NAEFALAMCPTEP+VLSGGKDKSVV WSIQDH++ TDS ++ + + S E E
Sbjct: 222 QDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTVGTDSKSSGSIIKQTGESGEKTE 281
Query: 49 SPRIGPRGVFKGHDDT 2
SP +GPRGV+ GHDDT
Sbjct: 282 SPTVGPRGVYVGHDDT 297
>ref|XP_006451474.1| hypothetical protein CICLE_v10008090mg [Citrus clementina]
gi|568843093|ref|XP_006475456.1| PREDICTED: WD-40
repeat-containing protein MSI4-like [Citrus sinensis]
gi|557554700|gb|ESR64714.1| hypothetical protein
CICLE_v10008090mg [Citrus clementina]
Length = 496
Score = 106 bits (265), Expect = 3e-21
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 10/86 (11%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKES-- 56
Q+NAEFALAMCPTEPYVLSGGKDKSVV WSIQDH+++SATD +T K S SI K+S
Sbjct: 195 QDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPK 254
Query: 55 --------GESPRIGPRGVFKGHDDT 2
+ P +GPRG++ GH+DT
Sbjct: 255 PGDGNDKAADGPSVGPRGIYNGHEDT 280
>ref|XP_006451473.1| hypothetical protein CICLE_v10008090mg [Citrus clementina]
gi|557554699|gb|ESR64713.1| hypothetical protein
CICLE_v10008090mg [Citrus clementina]
Length = 448
Score = 106 bits (265), Expect = 3e-21
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 10/86 (11%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKES-- 56
Q+NAEFALAMCPTEPYVLSGGKDKSVV WSIQDH+++SATD +T K S SI K+S
Sbjct: 195 QDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPK 254
Query: 55 --------GESPRIGPRGVFKGHDDT 2
+ P +GPRG++ GH+DT
Sbjct: 255 PGDGNDKAADGPSVGPRGIYNGHEDT 280
>ref|XP_004287561.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Fragaria
vesca subsp. vesca]
Length = 500
Score = 106 bits (264), Expect = 4e-21
Identities = 51/82 (62%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESG- 53
Q+NAEFALAMCPTEPYVLSGGKDK+VV WSIQDH++AS TD + K P S SI K G
Sbjct: 205 QDNAEFALAMCPTEPYVLSGGKDKTVVLWSIQDHIAASTTDPAATKSPGSGGSIIKPEGG 264
Query: 52 -----ESPRIGPRGVFKGHDDT 2
+ P + PRGV++GH+DT
Sbjct: 265 NEKIADGPSVAPRGVYQGHEDT 286
>ref|XP_002332825.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
gi|566176584|ref|XP_006381682.1| WD-40 repeat protein
MSI4 [Populus trichocarpa] gi|550336413|gb|ERP59479.1|
WD-40 repeat protein MSI4 [Populus trichocarpa]
Length = 502
Score = 105 bits (263), Expect = 5e-21
Identities = 52/82 (63%), Positives = 65/82 (79%), Gaps = 7/82 (8%)
Frame = -3
Query: 226 ENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESG-- 53
+NAEFALAMCPTEPYVLSGGKDKSVV WSIQDH+++SATD +T K P S SI K++G
Sbjct: 206 DNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPAT-KSPGSGGSIIKKAGDG 264
Query: 52 -----ESPRIGPRGVFKGHDDT 2
+ P +GPRG+++GH+DT
Sbjct: 265 NDKATDGPSVGPRGIYQGHEDT 286
>gb|AGN88924.1| FVE protein [Litchi chinensis]
Length = 494
Score = 105 bits (261), Expect = 8e-21
Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 7/83 (8%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESGE 50
Q+NAEFALAMCPTEPYVLSGGKDKSVV WSIQDH+++S TD +T K S SI K++ E
Sbjct: 196 QDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHIASSTTDPATAKSAGSGGSIIKQNSE 255
Query: 49 -------SPRIGPRGVFKGHDDT 2
P +GPRG++ GH+DT
Sbjct: 256 GNDKTADGPTVGPRGIYYGHEDT 278
>ref|XP_006451472.1| hypothetical protein CICLE_v10008090mg [Citrus clementina]
gi|557554698|gb|ESR64712.1| hypothetical protein
CICLE_v10008090mg [Citrus clementina]
Length = 490
Score = 104 bits (260), Expect = 1e-20
Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 10/85 (11%)
Frame = -3
Query: 226 ENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKES--- 56
+NAEFALAMCPTEPYVLSGGKDKSVV WSIQDH+++SATD +T K S SI K+S
Sbjct: 190 DNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKP 249
Query: 55 -------GESPRIGPRGVFKGHDDT 2
+ P +GPRG++ GH+DT
Sbjct: 250 GDGNDKAADGPSVGPRGIYNGHEDT 274
>ref|XP_004488042.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cicer
arietinum]
Length = 517
Score = 104 bits (260), Expect = 1e-20
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESGE 50
Q+NAEFALAMCPTEPYVLSGGKD++VV WSI+DH++++ATDS + + + S S E GE
Sbjct: 220 QDNAEFALAMCPTEPYVLSGGKDRTVVLWSIEDHVTSAATDSKSGGSIIKQNSKSGEGGE 279
Query: 49 ----SPRIGPRGVFKGHDDT 2
SP +GPRG++ GH+DT
Sbjct: 280 KTVDSPSVGPRGIYSGHEDT 299
>ref|XP_002886035.1| hypothetical protein ARALYDRAFT_899930 [Arabidopsis lyrata subsp.
lyrata] gi|297331875|gb|EFH62294.1| hypothetical protein
ARALYDRAFT_899930 [Arabidopsis lyrata subsp. lyrata]
Length = 507
Score = 104 bits (260), Expect = 1e-20
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESGE 50
Q+NAEFALAMCPTEP+VLSGGKDKSVV WSIQDH++ TDS ++ + + + E
Sbjct: 219 QDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTVGTDSKSSGSIIKQTGEGSDKNE 278
Query: 49 SPRIGPRGVFKGHDDT 2
SP +GPRGV+ GH+DT
Sbjct: 279 SPTVGPRGVYHGHEDT 294
>ref|NP_565456.2| WD-40 repeat-containing protein MSI4 [Arabidopsis thaliana]
gi|22096353|sp|O22607.3|MSI4_ARATH RecName: Full=WD-40
repeat-containing protein MSI4; AltName: Full=Altered
cold-responsive gene 1 protein
gi|30268748|gb|AAP29474.1|AF498101_1 MSI4 [Arabidopsis
thaliana] gi|30268750|gb|AAP29475.1|AF498102_1 MSI4
[Arabidopsis thaliana] gi|16323103|gb|AAL15286.1|
At2g19520/F3P11.12 [Arabidopsis thaliana]
gi|16648859|gb|AAL24281.1| putative WD-40 repeat
protein, MSI4 [Arabidopsis thaliana]
gi|20148237|gb|AAM10009.1| putative WD-40 repeat
protein, MSI4 [Arabidopsis thaliana]
gi|61661316|gb|AAX51264.1| FVE [Arabidopsis thaliana]
gi|330251797|gb|AEC06891.1| WD-40 repeat-containing
protein MSI4 [Arabidopsis thaliana]
Length = 507
Score = 104 bits (259), Expect = 1e-20
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESGE 50
Q+NAEFALAMCPTEP+VLSGGKDKSVV WSIQDH++ TDS ++ + + + E
Sbjct: 219 QDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNE 278
Query: 49 SPRIGPRGVFKGHDDT 2
SP +GPRGV+ GH+DT
Sbjct: 279 SPTVGPRGVYHGHEDT 294
>gb|EOY30457.1| Transducin family protein / WD-40 repeat family protein [Theobroma
cacao]
Length = 502
Score = 104 bits (259), Expect = 1e-20
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 3/79 (3%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKE--- 59
Q+NAEFALAMCPTEPYVLSGGKDKSVV+WSIQDH++ +ATD++ K P S SI K+
Sbjct: 210 QDNAEFALAMCPTEPYVLSGGKDKSVVWWSIQDHITTTATDAT--KSPGSGGSIIKQNDK 267
Query: 58 SGESPRIGPRGVFKGHDDT 2
+ + P +GPRG+F GH+DT
Sbjct: 268 AADGPSVGPRGIFCGHEDT 286
>gb|AAD10151.2| putative WD-40 repeat protein, MSI4 [Arabidopsis thaliana]
Length = 457
Score = 104 bits (259), Expect = 1e-20
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESGE 50
Q+NAEFALAMCPTEP+VLSGGKDKSVV WSIQDH++ TDS ++ + + + E
Sbjct: 169 QDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNE 228
Query: 49 SPRIGPRGVFKGHDDT 2
SP +GPRGV+ GH+DT
Sbjct: 229 SPTVGPRGVYHGHEDT 244
>gb|AAD03340.1| WD-40 repeat protein MSI4 [Arabidopsis thaliana]
Length = 457
Score = 103 bits (258), Expect = 2e-20
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESGE 50
Q+NAEFALAMCPTEP+VLSGGKDKSVV WSIQDH++ TDS ++ + + + E
Sbjct: 169 QDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQPGEGTDKNE 228
Query: 49 SPRIGPRGVFKGHDDT 2
SP +GPRGV+ GH+DT
Sbjct: 229 SPTVGPRGVYHGHEDT 244
>ref|XP_002330494.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
gi|566214622|ref|XP_006371975.1| WD-40 repeat protein
MSI4 [Populus trichocarpa] gi|550318221|gb|ERP49772.1|
WD-40 repeat protein MSI4 [Populus trichocarpa]
Length = 467
Score = 103 bits (258), Expect = 2e-20
Identities = 51/83 (61%), Positives = 65/83 (78%), Gaps = 7/83 (8%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTNKPPVSRMSISKESG- 53
Q+NAEFALAMCPTEPYVLSGGKDK VV WSIQDH+++SA+D +T K P S SI K++G
Sbjct: 170 QDNAEFALAMCPTEPYVLSGGKDKLVVLWSIQDHITSSASDPAT-KSPGSGGSIIKKTGD 228
Query: 52 ------ESPRIGPRGVFKGHDDT 2
+ P +GPRG+++GH+DT
Sbjct: 229 GSDKATDGPSVGPRGIYQGHEDT 251
>gb|AAX47182.1| FVE [Pisum sativum]
Length = 515
Score = 101 bits (251), Expect = 1e-19
Identities = 47/79 (59%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
Frame = -3
Query: 229 QENAEFALAMCPTEPYVLSGGKDKSVVFWSIQDHLSASATDSSTN---KPPVSRMSISKE 59
Q+NAEFALAMCPTEPYVLSGGKDK+VV WSI+DH++++ATD S KP + +
Sbjct: 219 QDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHVTSAATDKSGGSIIKPNSKSGEGNDK 278
Query: 58 SGESPRIGPRGVFKGHDDT 2
+ +SP +GPRG++ GHDDT
Sbjct: 279 TVDSPSVGPRGIYSGHDDT 297