BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020421
         (908 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   322   1e-85
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       321   2e-85
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   320   5e-85
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         317   4e-84
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   312   1e-82
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     312   1e-82
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   311   2e-82
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        310   6e-82
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   309   8e-82
gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subc...   308   2e-81
emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group] gi...   307   4e-81
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   307   4e-81
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni...   306   7e-81
ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772...   305   1e-80
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  305   1e-80
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752...   305   2e-80
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]         305   2e-80
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  302   1e-79
gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subc...   301   2e-79
gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Jap...   301   2e-79

>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  322 bits (825), Expect = 1e-85
 Identities = 173/307 (56%), Positives = 207/307 (67%), Gaps = 7/307 (2%)
 Frame = +3

Query: 6    FTYHGKRVTLLPMSPHEILQDQVER-DRQKALEAAXXXXXXXXXXXXXXXXXXASLERTH 182
            F ++GK++ L PMSP  IL+D++ R  +QK  E                      LE+  
Sbjct: 599  FVHNGKKLVLHPMSPEVILKDELARASKQKNQEHTRSEHLIAAN----------ELEKHK 648

Query: 183  SKEVSEATNGG--IQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLEGM 356
             K  +   N    I+L+GSC     +A  SDL         C+ LV   C +    +E  
Sbjct: 649  KKPTNSVQNNKNEIKLKGSC----FIATKSDLDEVDTDTVVCYALV---CKETLFPIEDT 701

Query: 357  PIA----ISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKE 524
            PI+    ++ LL+E+ D               IEHQIDL+PGASLPNRA YR  PEETKE
Sbjct: 702  PISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKE 761

Query: 525  LQRQVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDD 704
            +QRQVQELLD+GYVRES+SPC+VPV+LVPKKDGSWRMCVDCRAIN IT++YRHPIPRLDD
Sbjct: 762  IQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDD 821

Query: 705  MLDELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMR 884
            MLDEL G+ +FSKIDL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMR
Sbjct: 822  MLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMR 881

Query: 885  LMNHVLR 905
            LMN VLR
Sbjct: 882  LMNEVLR 888


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  321 bits (823), Expect = 2e-85
 Identities = 173/307 (56%), Positives = 207/307 (67%), Gaps = 7/307 (2%)
 Frame = +3

Query: 6    FTYHGKRVTLLPMSPHEILQDQVER-DRQKALEAAXXXXXXXXXXXXXXXXXXASLERTH 182
            F ++GK++ L PMSP  IL+D++ R  +QK  E                      LE+  
Sbjct: 599  FVHNGKKLVLHPMSPEVILKDELARASKQKNQEHTRSEHLIAAN----------ELEKHK 648

Query: 183  SKEVSEATNGG--IQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLEGM 356
             K  +   N    I+L+GSC     +A  SDL         C+ LV   C +    +E  
Sbjct: 649  KKPTNSVQNNKNEIKLKGSC----FIATKSDLDEVDTDTVFCYALV---CKETLFPIEDT 701

Query: 357  PIA----ISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKE 524
            PI+    ++ LL+E+ D               IEHQIDL+PGASLPNRA YR  PEETKE
Sbjct: 702  PISLRPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKE 761

Query: 525  LQRQVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDD 704
            +QRQVQELLD+GYVRES+SPC+VPV+LVPKKDGSWRMCVDCRAIN IT++YRHPIPRLDD
Sbjct: 762  IQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDD 821

Query: 705  MLDELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMR 884
            MLDEL G+ +FSKIDL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMR
Sbjct: 822  MLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMR 881

Query: 885  LMNHVLR 905
            LMN VLR
Sbjct: 882  LMNEVLR 888


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  320 bits (820), Expect = 5e-85
 Identities = 171/307 (55%), Positives = 207/307 (67%), Gaps = 7/307 (2%)
 Frame = +3

Query: 6    FTYHGKRVTLLPMSPHEILQDQVER-DRQKALEAAXXXXXXXXXXXXXXXXXXASLERTH 182
            F ++GK++ L PMSP  IL+D++ R  +QK  E                      LE+  
Sbjct: 599  FVHNGKKLVLHPMSPEVILKDELARASKQKNQEHTRSEHLIAAN----------ELEKHK 648

Query: 183  SKEVSEATNGG--IQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLEGM 356
             K  +   N    I+L+GSC     +A  SDL         C+ LV   C +    +E  
Sbjct: 649  KKPTNSVQNNKNEIKLKGSC----FIATKSDLDEVDTDTVVCYALV---CKETLFPIEDT 701

Query: 357  PIA----ISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKE 524
            PI+    ++ LL+E+ D               IEHQIDL+PGASLPNRA YR  PEETKE
Sbjct: 702  PISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKE 761

Query: 525  LQRQVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDD 704
            +QRQVQELLD+GYVRES+SPC++PV+LVPKKDGSWRMCVDCRAIN IT++YRHPIPRLDD
Sbjct: 762  IQRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDD 821

Query: 705  MLDELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMR 884
            MLDEL G+ +FSKIDL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTF+R
Sbjct: 822  MLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFIR 881

Query: 885  LMNHVLR 905
            LMN VLR
Sbjct: 882  LMNEVLR 888


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  317 bits (812), Expect = 4e-84
 Identities = 167/302 (55%), Positives = 200/302 (66%), Gaps = 4/302 (1%)
 Frame = +3

Query: 12   YHGKRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHSKE 191
            +H K++ LLPMSP  I++D V +  +                        A  E   + +
Sbjct: 593  HHDKKIILLPMSPEAIVRDDVAKATK------------------------AKTENNKNIK 628

Query: 192  VSEATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLEGM----P 359
            V      GI+L+G C    LLA  +D+          + LV   C     +++ M    P
Sbjct: 629  VVGNNKDGIKLKGHC----LLATKTDVNELFASTTVAYALV---CKDALISIQDMQHSLP 681

Query: 360  IAISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQRQV 539
              I+ +L+E+ D               IEHQIDL+PGASLPNRA YR  PEETKE+QRQV
Sbjct: 682  PVITNILQEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQV 741

Query: 540  QELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLDEL 719
            QELLD+GYVRES+SPCAVPVILVPKKDG+WRMCVDCRAIN IT++YRHPIPRLDDMLDEL
Sbjct: 742  QELLDKGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDEL 801

Query: 720  HGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHV 899
             GA +FSK+DL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN V
Sbjct: 802  SGAIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEV 861

Query: 900  LR 905
            LR
Sbjct: 862  LR 863


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  312 bits (799), Expect = 1e-82
 Identities = 168/304 (55%), Positives = 199/304 (65%), Gaps = 4/304 (1%)
 Frame = +3

Query: 6    FTYHGKRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHS 185
            F YH K++ L  MSP +IL+D V +  +   E                     S ++  S
Sbjct: 588  FLYHDKKIVLHSMSPEDILRDDVAKAAKSKCE---------------------SDKKAQS 626

Query: 186  KEVSEATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLEGM--- 356
                  T   I L+  C    LLA  SD+   +   +  + LV   C     +L  M   
Sbjct: 627  DGKKPET---INLKPKC----LLATKSDINELIASPSVAYALV---CKDALISLHDMQHS 676

Query: 357  -PIAISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQR 533
             P A++ +L+E+ D               IEHQIDL+PGASLPNRA YR  PEETKE+QR
Sbjct: 677  LPPAVANILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQR 736

Query: 534  QVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLD 713
            QV ELLD+GYVRES+SPCAVPVILVPKKDGSWRMCVDCRAIN IT++YRHPIPRLDDMLD
Sbjct: 737  QVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLD 796

Query: 714  ELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMN 893
            EL G+ +FSK+DL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN
Sbjct: 797  ELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMN 856

Query: 894  HVLR 905
             VLR
Sbjct: 857  EVLR 860


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  312 bits (799), Expect = 1e-82
 Identities = 165/301 (54%), Positives = 207/301 (68%), Gaps = 3/301 (0%)
 Frame = +3

Query: 12   YHGKRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHSKE 191
            + GK + L PM+P +IL + +++  +   E+A                   +L   H K 
Sbjct: 577  WKGKELILKPMTPQQILAEHLQKSSEVRNESAKEGQKN-------------NLSAPH-KS 622

Query: 192  VSEATNGGIQ--LQGSCEHRLLLARPSDLTPTL-NGKAPCFLLVPTPCAQYAPTLEGMPI 362
            VSE+    ++   +   E+ +++A  S++     N +   F+LV       A  L  +P 
Sbjct: 623  VSESHKPNMRDNKKREGENLVMIATKSEMRDVRRNPEQVLFILVCKDTLLSANDLTSVPS 682

Query: 363  AISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQRQVQ 542
             ++++L+E++D               IEHQIDL+PGA+LPNR AYR  PEETKE+QRQVQ
Sbjct: 683  VVARVLQEYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQ 742

Query: 543  ELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLDELH 722
             LLD+GYVRES+SPCAVPVILVPKKDGSWRMCVDCRAIN ITV+YRHPIPRLDDMLDEL 
Sbjct: 743  ALLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELS 802

Query: 723  GASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 902
            G+ IFSKIDL+SG+HQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMNHVL
Sbjct: 803  GSMIFSKIDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVL 862

Query: 903  R 905
            R
Sbjct: 863  R 863


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  311 bits (798), Expect = 2e-82
 Identities = 167/304 (54%), Positives = 199/304 (65%), Gaps = 4/304 (1%)
 Frame = +3

Query: 6    FTYHGKRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHS 185
            F YH K++ L PMSP +IL+D V +  +   E                     S ++  S
Sbjct: 567  FLYHDKKIVLHPMSPEDILRDDVAKAAKSKCE---------------------SDKKAQS 605

Query: 186  KEVSEATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLEGM--- 356
                  T   I L+  C    LLA  SD+   +   +  + LV   C     +L  M   
Sbjct: 606  DGKKPET---INLKPKC----LLATKSDINELIASPSVAYALV---CKDALISLHDMQHS 655

Query: 357  -PIAISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQR 533
             P A++ +L+E+ D               IEHQIDL+PGASLPNRA YR  PEETKE+QR
Sbjct: 656  LPPAVANILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQR 715

Query: 534  QVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLD 713
            QV ELLD+GYVRES+SPCAVPVILVPKKDGSWRMCVDCRAIN IT++YRHPIPRLDDMLD
Sbjct: 716  QVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLD 775

Query: 714  ELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMN 893
            EL G+ +FSK++L+SGYHQI M+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN
Sbjct: 776  ELSGSIVFSKVELRSGYHQIHMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMN 835

Query: 894  HVLR 905
             VLR
Sbjct: 836  EVLR 839


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  310 bits (793), Expect = 6e-82
 Identities = 163/304 (53%), Positives = 197/304 (64%), Gaps = 4/304 (1%)
 Frame = +3

Query: 6    FTYHGKRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHS 185
            F YH K++ L PMSP +IL+D V +  +   E+                           
Sbjct: 682  FLYHDKKIVLHPMSPEDILRDDVAKAAKSKCES--------------------------- 714

Query: 186  KEVSEATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLEGM--- 356
             +    ++G      + + R LLA  SD+   +   +  + LV   C     +L  M   
Sbjct: 715  -DKKAQSDGKKPETINLKPRYLLATKSDINELIASPSVAYALV---CKDALISLHDMQHS 770

Query: 357  -PIAISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQR 533
             P A++ +L+E+ D               IEHQIDL+PGASLPNRA YR  PEETKE+QR
Sbjct: 771  LPPAVANILQEYSDVFPKEVPPGLPLVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQR 830

Query: 534  QVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLD 713
            QV ELLD+GYVRES+SPCAVPVILVPKKDGSWRMCVDCRAIN  T++YRHPIPRLDDMLD
Sbjct: 831  QVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNNTIRYRHPIPRLDDMLD 890

Query: 714  ELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMN 893
            EL G+ +FSK+DL+SGYHQIRM+ GDEWKT FKTK+GLYEWLVMPFGLTNAPSTFMRLMN
Sbjct: 891  ELSGSIVFSKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMN 950

Query: 894  HVLR 905
             VLR
Sbjct: 951  EVLR 954


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  309 bits (792), Expect = 8e-82
 Identities = 161/296 (54%), Positives = 198/296 (66%), Gaps = 1/296 (0%)
 Frame = +3

Query: 21   KRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHSKEVSE 200
            K +TLLPM+P  IL+D + R  +   E                      ++  ++K+ S 
Sbjct: 621  KNITLLPMTPESILKDDINRANKAKQEK------NKSENQIVAKEFEQQMQSNNNKQSSV 674

Query: 201  ATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCA-QYAPTLEGMPIAISQL 377
            A    I+L+ +C    LLA  SD+      K+ C+  V       +      +P A++ +
Sbjct: 675  ACE--IKLKSAC----LLATKSDIDDLDFSKSVCYAFVCKEALFSFEDVPSSLPPAVTNI 728

Query: 378  LEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQRQVQELLDR 557
            L+EF D               IEHQIDL+PGASLPNRA YR  PEETKE+ RQVQELLD+
Sbjct: 729  LQEFTDVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDK 788

Query: 558  GYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLDELHGASIF 737
            GY+RES+SPCAVP+ILVPKKDG+ RMCVDCR IN IT++YRHPIPRLDDMLDEL G++IF
Sbjct: 789  GYIRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSTIF 848

Query: 738  SKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLR 905
            SK+DL+SGYHQIRM+ GDEWKT FKTK+GLYEWLVMPFGLTNAPSTFMRLMN VLR
Sbjct: 849  SKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 904


>gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1202

 Score =  308 bits (788), Expect = 2e-81
 Identities = 166/304 (54%), Positives = 200/304 (65%), Gaps = 4/304 (1%)
 Frame = +3

Query: 6    FTYHGKRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHS 185
            F ++GK++TLLP++P EI++   ER     L+ +                   S     S
Sbjct: 425  FVHNGKKITLLPLTPAEIVEADKERAASLKLDESENQQVAKSVFPPKKDKLSPS-----S 479

Query: 186  KEVSEATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLE----G 353
            K       GG+ +   CE    +A  SD          C+ L+   C Q   +L+     
Sbjct: 480  KVEGIKLKGGVMIATKCE----IAEISD-------DDMCYFLI---CKQALVSLDDIASS 525

Query: 354  MPIAISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQR 533
            MP  ++ LL+E++D               IEHQIDL+PGASLPNRAAYR  PEETKE+QR
Sbjct: 526  MPPVVTNLLQEYEDVFPAEIPLGLPPMRGIEHQIDLIPGASLPNRAAYRTNPEETKEIQR 585

Query: 534  QVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLD 713
            QVQ+LLDR YVR+S+SPC VPVILVPKKDGSWRMCVD RAIN IT++YRHPIPR DDMLD
Sbjct: 586  QVQDLLDRWYVRQSLSPCVVPVILVPKKDGSWRMCVDYRAINNITIRYRHPIPRSDDMLD 645

Query: 714  ELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMN 893
            EL G+ IF+KIDL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN
Sbjct: 646  ELCGSIIFTKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMN 705

Query: 894  HVLR 905
             VLR
Sbjct: 706  EVLR 709


>emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group]
            gi|38345441|emb|CAE03293.2| OSJNBb0046P18.9 [Oryza sativa
            Japonica Group]
          Length = 1134

 Score =  307 bits (786), Expect = 4e-81
 Identities = 167/304 (54%), Positives = 197/304 (64%), Gaps = 4/304 (1%)
 Frame = +3

Query: 6    FTYHGKRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHS 185
            F YH K++ L PMS  +IL D V +  +   E                     S ++  S
Sbjct: 771  FLYHDKKIVLHPMSSEDILHDDVAKAAKSKCE---------------------SDKKAQS 809

Query: 186  KEVSEATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLEGM--- 356
                  T   I L+  C    LLA  SD+   +   +  + LV   C     +L  M   
Sbjct: 810  DGKKPET---INLKPKC----LLATKSDINELIASPSVAYALV---CKDALISLHDMQHS 859

Query: 357  -PIAISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQR 533
             P AI+ +L+E+ D               IEHQIDL+ GASLPNRA YR  PEETKE+QR
Sbjct: 860  LPPAIANILQEYSDVFPKEVPPGLLPVHGIEHQIDLILGASLPNRAPYRTNPEETKEIQR 919

Query: 534  QVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLD 713
            QV ELLD+GYVRES+SPCAVPVILVPKKDGSWRMCVDCRAIN IT++YRHPIPRLDDMLD
Sbjct: 920  QVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLD 979

Query: 714  ELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMN 893
            EL G+ +FSK+DL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAP+TFMRLMN
Sbjct: 980  ELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPNTFMRLMN 1039

Query: 894  HVLR 905
             VLR
Sbjct: 1040 EVLR 1043


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  307 bits (786), Expect = 4e-81
 Identities = 167/308 (54%), Positives = 197/308 (63%), Gaps = 8/308 (2%)
 Frame = +3

Query: 6    FTYH--GKRVTLLPMSPHEILQDQVERDR------QKALEAAXXXXXXXXXXXXXXXXXX 161
            +T H  GK+ TL P++P E+   QV+  +      QKA EA                   
Sbjct: 511  YTIHKGGKKYTLTPLAPKEVYNLQVQSKKLREELAQKAKEAMKETT-------------- 556

Query: 162  ASLERTHSKEVSEATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAP 341
            +  + T + E  +   G  +      H LL+ +  ++   L      FLL P        
Sbjct: 557  SGKQNTIAHEKKQRKEGMKKDTTQSSHNLLMTK-REVEQALRRGEGVFLLYPIDFCLNVI 615

Query: 342  TLEGMPIAISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETK 521
              E +P  +S LL EF D               IEHQIDL+PGASLPNR AYR  P+E K
Sbjct: 616  KSEIIPSDVSALLSEFADVFPEELPKGLPPIRGIEHQIDLIPGASLPNRPAYRTNPDEAK 675

Query: 522  ELQRQVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLD 701
            E+QRQV ELL  G+++ES+SPCAVPV+LVPKKDG+WRMCVDCRAIN ITVKYR+PIPRLD
Sbjct: 676  EIQRQVDELLQAGFIQESLSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRYPIPRLD 735

Query: 702  DMLDELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFM 881
            DMLDELHGA IFSKIDL+ GYHQIRMQ+GDEWKTAFKTK GLYEWLVMPFGLTNAPSTFM
Sbjct: 736  DMLDELHGAKIFSKIDLRRGYHQIRMQKGDEWKTAFKTKNGLYEWLVMPFGLTNAPSTFM 795

Query: 882  RLMNHVLR 905
            RLMNHVLR
Sbjct: 796  RLMNHVLR 803


>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  306 bits (784), Expect = 7e-81
 Identities = 158/252 (62%), Positives = 183/252 (72%), Gaps = 6/252 (2%)
 Frame = +3

Query: 168  LERTHSKEVSEATNGG--IQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAP 341
            LE+   K  +   N    I+L+GSC     +A  SDL         C+ LV   C +   
Sbjct: 540  LEKHKKKPTNSVQNNKNEIKLKGSC----FIATKSDLDEVDTDTVVCYALV---CKETLF 592

Query: 342  TLEGMPIA----ISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGP 509
             +E  PI+    ++ LL+E+ D               IEHQIDL+PGASLPNRA YR  P
Sbjct: 593  PIEDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNP 652

Query: 510  EETKELQRQVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPI 689
            EETKE+QRQVQELLD+GYVRES+SPC+VPV+LVPKKDGSWRMCVDCRAIN IT++YRHPI
Sbjct: 653  EETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPI 712

Query: 690  PRLDDMLDELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAP 869
            PRLDDMLDEL G+ +FSKIDL SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAP
Sbjct: 713  PRLDDMLDELSGSLVFSKIDLCSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 772

Query: 870  STFMRLMNHVLR 905
            STFMRLMN VLR
Sbjct: 773  STFMRLMNEVLR 784


>ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772114 [Setaria italica]
          Length = 1246

 Score =  305 bits (782), Expect = 1e-80
 Identities = 165/301 (54%), Positives = 194/301 (64%), Gaps = 1/301 (0%)
 Frame = +3

Query: 6    FTYHGKRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHS 185
            F  + K+V L+P+SP EI    V R +++  E                         + S
Sbjct: 519  FIANDKKVVLVPLSPEEIHASDVARMKREESEKRKLSEAPNTSKGETPTPSSHIKPHSTS 578

Query: 186  KEVSEATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTL-EGMPI 362
            K++          Q  C    L    S L    N  AP F+L+          L   +P 
Sbjct: 579  KQLR---------QNEC----LFVSRSALREVKNTTAPFFVLLHKEVLLSTTDLPSSLPS 625

Query: 363  AISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQRQVQ 542
             +  LL++FKD               IEHQIDLVPGASLPNR AYR  PEETKE+Q+QV+
Sbjct: 626  VVLDLLQDFKDVFPDEVPAGLPPLRGIEHQIDLVPGASLPNRPAYRTNPEETKEIQQQVK 685

Query: 543  ELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLDELH 722
            ELLD+GYVRES+SPCAVPV+LVPKKDGSWRMCVDCRAIN ITV+YRHPIPRLDDMLDEL 
Sbjct: 686  ELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINAITVRYRHPIPRLDDMLDELS 745

Query: 723  GASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 902
            G++IF+KIDL+SGYHQIRM+ GDEWKT FKTK+GLYEWLVMP GLTNAPSTFMRLMNHVL
Sbjct: 746  GSTIFTKIDLRSGYHQIRMKIGDEWKTTFKTKFGLYEWLVMPSGLTNAPSTFMRLMNHVL 805

Query: 903  R 905
            R
Sbjct: 806  R 806


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  305 bits (782), Expect = 1e-80
 Identities = 165/299 (55%), Positives = 197/299 (65%), Gaps = 4/299 (1%)
 Frame = +3

Query: 21   KRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHSKEVSE 200
            + +TLLPMSP  I++D + R    A +A                       ++ S   SE
Sbjct: 634  QNITLLPMSPEHIMKDDIAR----ASKAKQDLHKSENQIVAKEFEQHNKPNKSSSSVASE 689

Query: 201  ATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLEGMPI----AI 368
                 I+L+  C    LLA  SD+T      + C+  V   C +   + E MP     A+
Sbjct: 690  -----IKLKSGC----LLATKSDITDLDITTSVCYAFV---CKEVLFSFEDMPSSLPPAV 737

Query: 369  SQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQRQVQEL 548
              +L+EF D               IEHQIDL+PGASLPNRA YR  PEETKE+ RQVQEL
Sbjct: 738  INILQEFADVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQEL 797

Query: 549  LDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLDELHGA 728
            LD+GY+RES+SPCAVP+ILVPKKDG+ RMCVDCR IN IT++YRHPIPRLDDMLDEL G+
Sbjct: 798  LDKGYIRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGS 857

Query: 729  SIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLR 905
             IFSK+DL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN VLR
Sbjct: 858  IIFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 916


>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
          Length = 1295

 Score =  305 bits (780), Expect = 2e-80
 Identities = 165/308 (53%), Positives = 198/308 (64%), Gaps = 8/308 (2%)
 Frame = +3

Query: 6    FTYHGKRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHS 185
            F  + K+V L+P+SP EI    V R ++                           E +  
Sbjct: 652  FIANDKKVVLVPLSPEEIHASDVARMKR---------------------------EESEK 684

Query: 186  KEVSEATNGGIQLQGSCEHRLLLARPSDLTPTLN-------GKAPCFLLVPTPCAQYAPT 344
            +++SEA N     +G         +P   +  L         + P F+L+          
Sbjct: 685  RKLSEAPNTS---KGETPTPSSHIKPHSTSKQLRQNECLFVSRTPFFVLLHKEVLLSTTD 741

Query: 345  LEG-MPIAISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETK 521
            L   +P  +  LL++FKD               IEHQIDLVPGASLPNR AYR  PEETK
Sbjct: 742  LSSSLPSVVLDLLQDFKDVFPDEVPAGLPPLRGIEHQIDLVPGASLPNRPAYRTNPEETK 801

Query: 522  ELQRQVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLD 701
            E+Q+QV+ELLD+GYVRES+SPCAVPV+LVPKKDGSWRMCVDCRAIN ITV+YRHPIPRLD
Sbjct: 802  EIQQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINAITVRYRHPIPRLD 861

Query: 702  DMLDELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFM 881
            DMLDEL G++IF+KIDL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFM
Sbjct: 862  DMLDELSGSTIFTKIDLRSGYHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFM 921

Query: 882  RLMNHVLR 905
            RLMNHVLR
Sbjct: 922  RLMNHVLR 929


>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
          Length = 1170

 Score =  305 bits (780), Expect = 2e-80
 Identities = 156/252 (61%), Positives = 183/252 (72%), Gaps = 6/252 (2%)
 Frame = +3

Query: 168  LERTHSKEVSEATNGG--IQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAP 341
            LE+   K  +   N    I+L+GSC     +A  SDL         C+ LV   C +   
Sbjct: 277  LEKHKKKPTNSVQNNKNEIKLKGSC----FIATKSDLDEVDTDTVVCYALV---CKETLF 329

Query: 342  TLEGMPIA----ISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGP 509
             +E  PI+    ++ LL+E+ D               IEHQIDL+PGASLPNRA YR  P
Sbjct: 330  PIEDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNP 389

Query: 510  EETKELQRQVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPI 689
            EETKE+QRQ+QELLD+GYVRES+SPC+VPV+LVPKKDGSWRMCVDCRAIN IT++YRHPI
Sbjct: 390  EETKEIQRQMQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPI 449

Query: 690  PRLDDMLDELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAP 869
            PRLDDMLDEL G+ +F KIDL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAP
Sbjct: 450  PRLDDMLDELSGSLVFYKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 509

Query: 870  STFMRLMNHVLR 905
            STFMRLMN VLR
Sbjct: 510  STFMRLMNEVLR 521


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  302 bits (774), Expect = 1e-79
 Identities = 164/299 (54%), Positives = 196/299 (65%), Gaps = 4/299 (1%)
 Frame = +3

Query: 21   KRVTLLPMSPHEILQDQVERDRQKALEAAXXXXXXXXXXXXXXXXXXASLERTHSKEVSE 200
            + +TLLPMSP  I++D + R    A +A                       ++ S   SE
Sbjct: 637  QNITLLPMSPEHIMKDDIAR----ASKAKQDLHKSENQIVAKEFEQHNKPNKSSSSVASE 692

Query: 201  ATNGGIQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAPTLEGMPI----AI 368
                 I+L+  C    LLA  SD+T      + C+  V   C +   + E MP     A+
Sbjct: 693  -----IKLKSGC----LLATKSDITDLDITTSVCYAFV---CKEVLFSFEDMPSSLPPAV 740

Query: 369  SQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGPEETKELQRQVQEL 548
              +L+EF D               IEHQIDL+PGASLPNRA YR  PEETKE+ RQVQEL
Sbjct: 741  INILQEFADVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQEL 800

Query: 549  LDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPIPRLDDMLDELHGA 728
            LD+GY+RES+SPCAVP+ILVPKKDG+ RMCVDCR IN IT++ RHPIPRLDDMLDEL G+
Sbjct: 801  LDKGYIRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRXRHPIPRLDDMLDELSGS 860

Query: 729  SIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLR 905
             IFSK+DL+SGYHQIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN VLR
Sbjct: 861  IIFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 919


>gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1392

 Score =  301 bits (771), Expect = 2e-79
 Identities = 155/251 (61%), Positives = 181/251 (72%), Gaps = 6/251 (2%)
 Frame = +3

Query: 168  LERTHSKEVSEATNGG--IQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAP 341
            LE+   K  +   N    I+L+GSC     +A  SDL         C+ LV   C +   
Sbjct: 493  LEKHKKKPTNSVQNNKKEIKLKGSC----FIATKSDLDEVDTDTVVCYALV---CKETLF 545

Query: 342  TLEGMPIA----ISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGP 509
             +E  PI+    ++ LL+E+ D               IEHQIDL+PGASLPNRA YR  P
Sbjct: 546  PIEDTPISLPPPVTNLLQEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNP 605

Query: 510  EETKELQRQVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPI 689
            EETKE+QRQVQELLD+GYVRES+SPCAVPV+LVPKKDGSWRMCVDCRAI+ I ++YRHPI
Sbjct: 606  EETKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAIDNIIIRYRHPI 665

Query: 690  PRLDDMLDELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAP 869
            PRLDDMLDEL G+ +FSKIDL+SGYHQIRM+ GDEWK AFKTK+GLYEWLVMPFGLTNAP
Sbjct: 666  PRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKAAFKTKFGLYEWLVMPFGLTNAP 725

Query: 870  STFMRLMNHVL 902
            STFMRLMN VL
Sbjct: 726  STFMRLMNEVL 736


>gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1357

 Score =  301 bits (771), Expect = 2e-79
 Identities = 155/251 (61%), Positives = 181/251 (72%), Gaps = 6/251 (2%)
 Frame = +3

Query: 168  LERTHSKEVSEATNGG--IQLQGSCEHRLLLARPSDLTPTLNGKAPCFLLVPTPCAQYAP 341
            LE+   K  +   N    I+L+GSC     +A  SDL         C+ LV   C +   
Sbjct: 458  LEKHKKKPTNSVQNNKKEIKLKGSC----FIATKSDLDEVDTDTVVCYALV---CKETLF 510

Query: 342  TLEGMPIA----ISQLLEEFKDXXXXXXXXXXXXXXXIEHQIDLVPGASLPNRAAYRAGP 509
             +E  PI+    ++ LL+E+ D               IEHQIDL+PGASLPNRA YR  P
Sbjct: 511  PIEDTPISLPPPVTNLLQEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNP 570

Query: 510  EETKELQRQVQELLDRGYVRESMSPCAVPVILVPKKDGSWRMCVDCRAINQITVKYRHPI 689
            EETKE+QRQVQELLD+GYVRES+SPCAVPV+LVPKKDGSWRMCVDCRAI+ I ++YRHPI
Sbjct: 571  EETKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAIDNIIIRYRHPI 630

Query: 690  PRLDDMLDELHGASIFSKIDLKSGYHQIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAP 869
            PRLDDMLDEL G+ +FSKIDL+SGYHQIRM+ GDEWK AFKTK+GLYEWLVMPFGLTNAP
Sbjct: 631  PRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKAAFKTKFGLYEWLVMPFGLTNAP 690

Query: 870  STFMRLMNHVL 902
            STFMRLMN VL
Sbjct: 691  STFMRLMNEVL 701