BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020338
         (1138 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     665   0.0  
emb|CBI17913.3| unnamed protein product [Vitis vinifera]              657   0.0  
gb|EMJ27982.1| hypothetical protein PRUPE_ppa018049mg, partial [...   650   0.0  
gb|EOY32048.1| DNA ligase IV [Theobroma cacao]                        649   0.0  
ref|XP_004297907.1| PREDICTED: DNA ligase 4-like [Fragaria vesca...   646   0.0  
ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]    641   0.0  
ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Sol...   641   0.0  
ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Sol...   641   0.0  
ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Sol...   641   0.0  
ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citr...   640   0.0  
ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycope...   639   0.0  
ref|XP_006401236.1| hypothetical protein EUTSA_v10012474mg [Eutr...   639   0.0  
gb|ESW10764.1| hypothetical protein PHAVU_009G235800g [Phaseolus...   638   e-180
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Gly...   637   e-180
ref|XP_002325262.2| DNA ligase IV family protein [Populus tricho...   634   e-179
ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata] gi...   634   e-179
ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana] gi|75174554...   633   e-179
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                         633   e-179
ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Cit...   630   e-178
ref|XP_006850874.1| hypothetical protein AMTR_s00025p00149970 [A...   623   e-176

>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  665 bits (1716), Expect = 0.0
 Identities = 320/378 (84%), Positives = 352/378 (93%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SR+S DA+RLINWRKGGAKTG NAGNF  VAAE+LQRRQGMTSGGLTIKELN+LLD LAS
Sbjct: 79   SRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTSGGLTIKELNDLLDCLAS 138

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENR EK S+L  LI+KTN+QEMKWI+MI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 139  SENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 198

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DRSQRHKRQDIEVGKAVRPQLAMRV++A  AWKKLHGKEVVVECKFDGDRI
Sbjct: 199  LKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKKLHGKEVVVECKFDGDRI 258

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNG +IHFFSRNF+DHPEY +AMSNI+ +N+LVDRCILDGEMLVWD S NRFAEFGS
Sbjct: 259  QIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILDGEMLVWDISLNRFAEFGS 318

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAA++GLDSDRQLCYVAFDILY GDTSVIH +LKERH+LLQKVVKPLK RFEILV
Sbjct: 319  NQEIAKAAKEGLDSDRQLCYVAFDILYVGDTSVIHQTLKERHELLQKVVKPLKGRFEILV 378

Query: 903  PNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWL 1082
            P+GGLN  RPSGEPCWSL+A  V DVERFFK+T+ENR+EG+VLKDLGSKW+PSDRSGKWL
Sbjct: 379  PSGGLNTHRPSGEPCWSLIAYDVDDVERFFKKTVENRDEGIVLKDLGSKWEPSDRSGKWL 438

Query: 1083 KLKPDYIRAGSDLDVLII 1136
            KLKP+Y+ AGSDLDVLII
Sbjct: 439  KLKPEYVHAGSDLDVLII 456


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  657 bits (1694), Expect = 0.0
 Identities = 319/379 (84%), Positives = 351/379 (92%), Gaps = 1/379 (0%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SR+S DA+RLINWRKGGAKTG NAGNF  VAAE+LQRRQGMTSGGLTIKELN+LLD LAS
Sbjct: 79   SRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTSGGLTIKELNDLLDCLAS 138

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENR EK S+L  LI+KTN+QEMKWI+MI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 139  SENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 198

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DRSQRHKRQDIEVGKAVRPQLAMRV++A  AWKKLHGKEVVVECKFDGDRI
Sbjct: 199  LKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKKLHGKEVVVECKFDGDRI 258

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNG +IHFFSRNF+DHPEY +AMSNI+ +N+LVDRCILDGEMLVWD S NRFAEFGS
Sbjct: 259  QIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILDGEMLVWDISLNRFAEFGS 318

Query: 723  NQEIAKAARDGLDSDRQ-LCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEIL 899
            NQEIAKAA++GLDSDRQ L YVAFDILY GDTSVIH +LKERH+LLQKVVKPLK RFEIL
Sbjct: 319  NQEIAKAAKEGLDSDRQVLSYVAFDILYVGDTSVIHQTLKERHELLQKVVKPLKGRFEIL 378

Query: 900  VPNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKW 1079
            VP+GGLN  RPSGEPCWSL+A  V DVERFFK+T+ENR+EG+VLKDLGSKW+PSDRSGKW
Sbjct: 379  VPSGGLNTHRPSGEPCWSLIAYDVDDVERFFKKTVENRDEGIVLKDLGSKWEPSDRSGKW 438

Query: 1080 LKLKPDYIRAGSDLDVLII 1136
            LKLKP+Y+ AGSDLDVLII
Sbjct: 439  LKLKPEYVHAGSDLDVLII 457


>gb|EMJ27982.1| hypothetical protein PRUPE_ppa018049mg, partial [Prunus persica]
          Length = 539

 Score =  650 bits (1677), Expect = 0.0
 Identities = 324/417 (77%), Positives = 356/417 (85%), Gaps = 39/417 (9%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            +RDS DA+RLINWRKGGAKTGVNAGNF  VAAE+LQRRQG++SGGLTIKELN+LLDRLAS
Sbjct: 79   ARDSEDALRLINWRKGGAKTGVNAGNFSLVAAEVLQRRQGVSSGGLTIKELNDLLDRLAS 138

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENRAEK S+L  LI+KTN+QEMKWI+MI+LKDLKLG SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 139  SENRAEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGTSEKSIFHEFHPDAEDLFNVTCD 198

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DR+QRHKRQDIEVGKAVRPQLAMRV +A +AWKKLHGKEVVVECKFDGDRI
Sbjct: 199  LKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVGDATIAWKKLHGKEVVVECKFDGDRI 258

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNG++IH+FSRNF+DHPEYGHAMS+I+++N+L DRCILDGEMLVWD S+NRFAEFGS
Sbjct: 259  QIHKNGTEIHYFSRNFLDHPEYGHAMSDIVIQNVLADRCILDGEMLVWDTSSNRFAEFGS 318

Query: 723  NQEIAKAARDGLDSDRQ------------------LCY---------------------V 785
            NQEIAKAARDGLDSDRQ                  LC                      V
Sbjct: 319  NQEIAKAARDGLDSDRQSPAYTLCPPSSCSCAVSFLCLTLLKVEVDVRLCKHFNVIGDDV 378

Query: 786  AFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILVPNGGLNIDRPSGEPCWSLLAR 965
            AFDILY GDTSVIH SLKERH+LLQKVVKPLK R EILVPNGGLN  R  G+PCWSL+AR
Sbjct: 379  AFDILYVGDTSVIHQSLKERHELLQKVVKPLKGRLEILVPNGGLNTHRSEGDPCWSLIAR 438

Query: 966  SVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWLKLKPDYIRAGSDLDVLII 1136
            SV +VERFFKETIENR+EG+VLKDLGSKW+PSDRSGKWLKLKPDYIRAGSDLDVLII
Sbjct: 439  SVDEVERFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLII 495


>gb|EOY32048.1| DNA ligase IV [Theobroma cacao]
          Length = 1195

 Score =  649 bits (1674), Expect = 0.0
 Identities = 316/378 (83%), Positives = 343/378 (90%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SRDSPDA+RLINWRKGGA TG NAGNF  VAAE+LQRRQG  SGGLTIKELN+LLDRLAS
Sbjct: 79   SRDSPDALRLINWRKGGANTGANAGNFALVAAEVLQRRQGTASGGLTIKELNDLLDRLAS 138

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            +E+RAEK ++L  LI KTN QEMKWIIMI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 139  AESRAEKTTVLSSLINKTNGQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 198

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L++VCEKL DRSQRHKRQDIEVGKAVRPQLAMRV +AA AWKKLHGKEV+VECKFDGDRI
Sbjct: 199  LKMVCEKLRDRSQRHKRQDIEVGKAVRPQLAMRVRDAAAAWKKLHGKEVLVECKFDGDRI 258

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNG++IH++SRNF+DH EY   MSNII +NILVDRCILDGEMLVWD + +RFAEFGS
Sbjct: 259  QIHKNGTEIHYYSRNFLDHSEYERGMSNIIAQNILVDRCILDGEMLVWDTTLSRFAEFGS 318

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAA+DGLDSDRQLCYVAFDILY GDTSVIH SLKERH+LLQKVVKPLK R EILV
Sbjct: 319  NQEIAKAAKDGLDSDRQLCYVAFDILYVGDTSVIHQSLKERHELLQKVVKPLKGRLEILV 378

Query: 903  PNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWL 1082
            P G LN   P GEPCWS LA SV DVERFFKETIENR+EG+VLKDLGSKW+PSDRSGKWL
Sbjct: 379  PYGALNSHHPPGEPCWSCLAYSVDDVERFFKETIENRDEGIVLKDLGSKWEPSDRSGKWL 438

Query: 1083 KLKPDYIRAGSDLDVLII 1136
            KLKP+YI AGSDLDVLII
Sbjct: 439  KLKPEYIHAGSDLDVLII 456


>ref|XP_004297907.1| PREDICTED: DNA ligase 4-like [Fragaria vesca subsp. vesca]
          Length = 1188

 Score =  646 bits (1666), Expect = 0.0
 Identities = 310/378 (82%), Positives = 344/378 (91%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SRDS DA+RLINWRKGGA+TG NAGNF  VAAE+LQRRQG++SGGLTI ELNELLDRLAS
Sbjct: 82   SRDSDDALRLINWRKGGARTGANAGNFALVAAEVLQRRQGLSSGGLTINELNELLDRLAS 141

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENR EK SIL  L++KTN+QEMKWI+MI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 142  SENRTEKTSILTTLVQKTNAQEMKWIVMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 201

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL +RSQRHKRQDIEVGKAVRPQLAMRV +A  AWKK HGKE+VVECKFDGDRI
Sbjct: 202  LKLVCEKLRNRSQRHKRQDIEVGKAVRPQLAMRVGDATAAWKKFHGKEIVVECKFDGDRI 261

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNG ++H++SRNF+DH EYGHAMS+II++N+  DRCILDGEMLVWD S  RFAEFGS
Sbjct: 262  QIHKNGGEVHYYSRNFLDHSEYGHAMSDIIIQNVQADRCILDGEMLVWDTSLKRFAEFGS 321

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAA+DGLDSD+QLCYVAFDILY GDTSVIH SLKER +LLQKVVKPL  R EILV
Sbjct: 322  NQEIAKAAKDGLDSDKQLCYVAFDILYVGDTSVIHESLKERQELLQKVVKPLTGRLEILV 381

Query: 903  PNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWL 1082
            PNGGLN  R SGEPCWSL+  +V DV+RFFKETI NR+EG+V+KDLGSKW+PSDRSGKWL
Sbjct: 382  PNGGLNTRRSSGEPCWSLVVHTVDDVQRFFKETIANRDEGIVIKDLGSKWEPSDRSGKWL 441

Query: 1083 KLKPDYIRAGSDLDVLII 1136
            KLKPDYIRAGSDLDVLII
Sbjct: 442  KLKPDYIRAGSDLDVLII 459


>ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]
          Length = 1168

 Score =  641 bits (1654), Expect = 0.0
 Identities = 307/378 (81%), Positives = 347/378 (91%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            S+DS DA+RL+NWRKGG+KTGVNAGNF  VA+E+LQ RQG  SGGLTIKELN+LLD+L+S
Sbjct: 79   SKDSHDALRLVNWRKGGSKTGVNAGNFALVASEVLQLRQGTASGGLTIKELNDLLDQLSS 138

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENRAEK  +L  LI+KTN+QEMKWIIMI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 139  SENRAEKTLVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 198

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DR+QRHKRQDIEVGKAVRPQLA RV+NAA AWKKLHGKEVV ECKFDGDRI
Sbjct: 199  LKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANAAEAWKKLHGKEVVAECKFDGDRI 258

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNG++IHFFSRNF+DH EY HAMS II++NILVDRCILDGEMLVWD S NRFAEFGS
Sbjct: 259  QIHKNGTEIHFFSRNFLDHSEYAHAMSEIIVQNILVDRCILDGEMLVWDTSLNRFAEFGS 318

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAARDGLDS+RQLCYVAFDILY GDTSVIH +LKERH++L+KVV+P+K R EIL+
Sbjct: 319  NQEIAKAARDGLDSNRQLCYVAFDILYFGDTSVIHQTLKERHEILRKVVRPMKGRLEILL 378

Query: 903  PNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWL 1082
            PNGG+N  R SGEPCWS +A +  +VERFFKETIENR+EG+V+KDL SKW+PSDRSGKWL
Sbjct: 379  PNGGINSHRSSGEPCWSFIAHNADEVERFFKETIENRDEGIVVKDLSSKWEPSDRSGKWL 438

Query: 1083 KLKPDYIRAGSDLDVLII 1136
            KLKP+YI+AGSDLDVLII
Sbjct: 439  KLKPEYIQAGSDLDVLII 456


>ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Solanum tuberosum]
          Length = 1119

 Score =  641 bits (1653), Expect = 0.0
 Identities = 310/378 (82%), Positives = 343/378 (90%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SR+S DA RL+NWRKGG KTG NAGNF  VAAE+LQRRQGM S GLTIKELN+ LD LAS
Sbjct: 94   SRESDDARRLLNWRKGGPKTGSNAGNFSLVAAEVLQRRQGMASAGLTIKELNDFLDHLAS 153

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENRAEK SIL +LIRKTN+QEMKWIIMI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 154  SENRAEKTSILSDLIRKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 213

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DRSQRHKRQDIEVGK VRPQLA+RVSNA+ AWKKL+GKEVVVECKFDGDRI
Sbjct: 214  LKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNASAAWKKLYGKEVVVECKFDGDRI 273

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKN S+++FFSRNF+DH EY H MS++I +NIL D+CILDGEMLVWD S NRFAEFGS
Sbjct: 274  QIHKNNSELNFFSRNFLDHQEYAHGMSDVITQNILADKCILDGEMLVWDASINRFAEFGS 333

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAAR+GLDSDRQLCYVAFDILY GDTSVIH SLKER ++LQKVVKP+K R EILV
Sbjct: 334  NQEIAKAAREGLDSDRQLCYVAFDILYVGDTSVIHRSLKERQEILQKVVKPIKGRLEILV 393

Query: 903  PNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWL 1082
            PNGGLN  R SGEPCWS++ARSV DV++FFK T+ENR+EG+VLKDL SKW+PSDRSGKWL
Sbjct: 394  PNGGLNAHRLSGEPCWSIIARSVDDVDKFFKGTVENRDEGIVLKDLTSKWEPSDRSGKWL 453

Query: 1083 KLKPDYIRAGSDLDVLII 1136
            KLKPDY+R GSDLDVLII
Sbjct: 454  KLKPDYVRPGSDLDVLII 471


>ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Solanum tuberosum]
          Length = 1171

 Score =  641 bits (1653), Expect = 0.0
 Identities = 310/378 (82%), Positives = 343/378 (90%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SR+S DA RL+NWRKGG KTG NAGNF  VAAE+LQRRQGM S GLTIKELN+ LD LAS
Sbjct: 94   SRESDDARRLLNWRKGGPKTGSNAGNFSLVAAEVLQRRQGMASAGLTIKELNDFLDHLAS 153

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENRAEK SIL +LIRKTN+QEMKWIIMI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 154  SENRAEKTSILSDLIRKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 213

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DRSQRHKRQDIEVGK VRPQLA+RVSNA+ AWKKL+GKEVVVECKFDGDRI
Sbjct: 214  LKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNASAAWKKLYGKEVVVECKFDGDRI 273

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKN S+++FFSRNF+DH EY H MS++I +NIL D+CILDGEMLVWD S NRFAEFGS
Sbjct: 274  QIHKNNSELNFFSRNFLDHQEYAHGMSDVITQNILADKCILDGEMLVWDASINRFAEFGS 333

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAAR+GLDSDRQLCYVAFDILY GDTSVIH SLKER ++LQKVVKP+K R EILV
Sbjct: 334  NQEIAKAAREGLDSDRQLCYVAFDILYVGDTSVIHRSLKERQEILQKVVKPIKGRLEILV 393

Query: 903  PNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWL 1082
            PNGGLN  R SGEPCWS++ARSV DV++FFK T+ENR+EG+VLKDL SKW+PSDRSGKWL
Sbjct: 394  PNGGLNAHRLSGEPCWSIIARSVDDVDKFFKGTVENRDEGIVLKDLTSKWEPSDRSGKWL 453

Query: 1083 KLKPDYIRAGSDLDVLII 1136
            KLKPDY+R GSDLDVLII
Sbjct: 454  KLKPDYVRPGSDLDVLII 471


>ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Solanum tuberosum]
          Length = 1172

 Score =  641 bits (1653), Expect = 0.0
 Identities = 310/378 (82%), Positives = 343/378 (90%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SR+S DA RL+NWRKGG KTG NAGNF  VAAE+LQRRQGM S GLTIKELN+ LD LAS
Sbjct: 94   SRESDDARRLLNWRKGGPKTGSNAGNFSLVAAEVLQRRQGMASAGLTIKELNDFLDHLAS 153

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENRAEK SIL +LIRKTN+QEMKWIIMI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 154  SENRAEKTSILSDLIRKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 213

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DRSQRHKRQDIEVGK VRPQLA+RVSNA+ AWKKL+GKEVVVECKFDGDRI
Sbjct: 214  LKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNASAAWKKLYGKEVVVECKFDGDRI 273

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKN S+++FFSRNF+DH EY H MS++I +NIL D+CILDGEMLVWD S NRFAEFGS
Sbjct: 274  QIHKNNSELNFFSRNFLDHQEYAHGMSDVITQNILADKCILDGEMLVWDASINRFAEFGS 333

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAAR+GLDSDRQLCYVAFDILY GDTSVIH SLKER ++LQKVVKP+K R EILV
Sbjct: 334  NQEIAKAAREGLDSDRQLCYVAFDILYVGDTSVIHRSLKERQEILQKVVKPIKGRLEILV 393

Query: 903  PNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWL 1082
            PNGGLN  R SGEPCWS++ARSV DV++FFK T+ENR+EG+VLKDL SKW+PSDRSGKWL
Sbjct: 394  PNGGLNAHRLSGEPCWSIIARSVDDVDKFFKGTVENRDEGIVLKDLTSKWEPSDRSGKWL 453

Query: 1083 KLKPDYIRAGSDLDVLII 1136
            KLKPDY+R GSDLDVLII
Sbjct: 454  KLKPDYVRPGSDLDVLII 471


>ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
            gi|568840651|ref|XP_006474279.1| PREDICTED: DNA ligase
            4-like isoform X3 [Citrus sinensis]
            gi|557556466|gb|ESR66480.1| hypothetical protein
            CICLE_v10007283mg [Citrus clementina]
          Length = 1159

 Score =  640 bits (1651), Expect = 0.0
 Identities = 313/379 (82%), Positives = 344/379 (90%), Gaps = 1/379 (0%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            S+DS DAVRLINWRKGG  T  NAGNFP VAAE+LQRRQGM SGGLTIKELN+LLDRLAS
Sbjct: 81   SKDSADAVRLINWRKGG--TAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLAS 138

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENRAEK S+L  LI+KTN+QEMKWIIMI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 139  SENRAEKTSVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 198

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DR+QRHKRQDIEVGKAVRPQLAMR+ +A  AW+KLHGKEVV+ECKFDGDRI
Sbjct: 199  LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRI 258

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNGS+IH+FSR+F+DH EYGHAMS II +N+LVDRCILDGEMLVWD S NRFAEFGS
Sbjct: 259  QIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGS 318

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAARDGL SDRQLCY AFD+LY GDTSVIH SLKERH+LLQKVVKP K R E LV
Sbjct: 319  NQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLV 378

Query: 903  PNGGLNID-RPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKW 1079
            P+ GLN   RP GEPCWSL+A +V +VE+FFKETIENR+EG+VLKDLGSKW+P DRSGKW
Sbjct: 379  PDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKW 438

Query: 1080 LKLKPDYIRAGSDLDVLII 1136
            LKLKP+YIRAGSDLDVLII
Sbjct: 439  LKLKPEYIRAGSDLDVLII 457


>ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycopersicum]
          Length = 1172

 Score =  639 bits (1648), Expect = 0.0
 Identities = 309/378 (81%), Positives = 341/378 (90%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SRDS DA RL+NWRKGG KTG NAGNF  VAAE+LQRRQGM S GLTIKELN+ LD LAS
Sbjct: 94   SRDSDDARRLLNWRKGGPKTGSNAGNFSLVAAEVLQRRQGMASAGLTIKELNDFLDHLAS 153

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENRAEK SIL +LIRKTN+QEMKWIIMI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 154  SENRAEKTSILSDLIRKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 213

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DRSQRHKRQDIEVGK VRPQLA+RVSN + AWKKL+GKEVVVECKFDGDRI
Sbjct: 214  LKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNVSAAWKKLYGKEVVVECKFDGDRI 273

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKN S+++FFSRNF+DH EY H MS++I +NIL D+CILDGEMLVWD S NRFAEFGS
Sbjct: 274  QIHKNNSELNFFSRNFLDHQEYAHGMSDVITQNILADKCILDGEMLVWDASINRFAEFGS 333

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAAR+GLDSDRQLCYVAFDILY GDTSVIH SLKER ++LQKVVKP+K R EILV
Sbjct: 334  NQEIAKAAREGLDSDRQLCYVAFDILYVGDTSVIHRSLKERQEILQKVVKPIKGRLEILV 393

Query: 903  PNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWL 1082
            PNGGLN  R SGEPCWS++A SV DV++FFK T+ENR+EG+VLKDL SKW+PSDRSGKWL
Sbjct: 394  PNGGLNAHRLSGEPCWSIIAHSVDDVDKFFKGTVENRDEGIVLKDLTSKWEPSDRSGKWL 453

Query: 1083 KLKPDYIRAGSDLDVLII 1136
            KLKPDY+R GSDLDVLII
Sbjct: 454  KLKPDYVRPGSDLDVLII 471


>ref|XP_006401236.1| hypothetical protein EUTSA_v10012474mg [Eutrema salsugineum]
            gi|557102326|gb|ESQ42689.1| hypothetical protein
            EUTSA_v10012474mg [Eutrema salsugineum]
          Length = 1220

 Score =  639 bits (1647), Expect = 0.0
 Identities = 307/379 (81%), Positives = 344/379 (90%), Gaps = 1/379 (0%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGG-AKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLA 179
            SRD+PDAVRL+NWRKGG AK G NAGNF  +AAE+LQRRQGM SGGLTIKELN+LLDRLA
Sbjct: 79   SRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMASGGLTIKELNDLLDRLA 138

Query: 180  SSENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTC 359
            SSENRAEK S+L  LI+KTN+QEMKW+I I+LKDLKLG+SEKSIF EFHPDAEDLFNVTC
Sbjct: 139  SSENRAEKTSLLSTLIQKTNAQEMKWVIRIILKDLKLGMSEKSIFQEFHPDAEDLFNVTC 198

Query: 360  DLRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDR 539
            DL+LVCEKL DR QRHKRQDIEVGKAVRPQLAMR  +   AWKKLHGK+VV ECKFDGDR
Sbjct: 199  DLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRSGDVNAAWKKLHGKDVVAECKFDGDR 258

Query: 540  IQIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFG 719
            IQIHKNG++IH+FSRNF+DH EY HAMS++I++NIL D+CILDGEMLVWD S NRFAEFG
Sbjct: 259  IQIHKNGTEIHYFSRNFLDHSEYAHAMSDLIVQNILADKCILDGEMLVWDTSLNRFAEFG 318

Query: 720  SNQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEIL 899
            SNQEIAKAAR+GLDS RQLCYVAFD+LY GDTSVIH SLKERH+LL+KVVKPLK R E+L
Sbjct: 319  SNQEIAKAAREGLDSHRQLCYVAFDVLYVGDTSVIHQSLKERHELLRKVVKPLKGRLEVL 378

Query: 900  VPNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKW 1079
            VP GGLN+ RPSGEP WS++A S +DVERFFKET+ENR+EGVVLKDLGSKW+P DRSGKW
Sbjct: 379  VPEGGLNVHRPSGEPSWSIVAHSAADVERFFKETVENRDEGVVLKDLGSKWEPGDRSGKW 438

Query: 1080 LKLKPDYIRAGSDLDVLII 1136
            +KLKP+YIRAGSDLDVLII
Sbjct: 439  MKLKPEYIRAGSDLDVLII 457


>gb|ESW10764.1| hypothetical protein PHAVU_009G235800g [Phaseolus vulgaris]
          Length = 1172

 Score =  638 bits (1645), Expect = e-180
 Identities = 308/378 (81%), Positives = 340/378 (89%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SRDSPDA+RL+NWRKGGA TG  AGNF  VAAE+L  RQG  SGGLTI+ELNELLDRLAS
Sbjct: 80   SRDSPDALRLVNWRKGGAATGATAGNFALVAAEVLHLRQGTASGGLTIRELNELLDRLAS 139

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
             ENRAEKI +L  LI+KTN+QEMKWIIMI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 140  GENRAEKILVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 199

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DR+QRHKRQDIEVGKAVRPQLA RV+NA  AWKKLHGKEVVVECKFDGDRI
Sbjct: 200  LKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANATEAWKKLHGKEVVVECKFDGDRI 259

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNG +IHFFSRNFIDH EY HAMS II++N+LVDRCILDGEMLVWD S+ RFAEFGS
Sbjct: 260  QIHKNGPEIHFFSRNFIDHSEYAHAMSEIIIQNVLVDRCILDGEMLVWDTSSKRFAEFGS 319

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAARDGLDSDRQLCYVAFDILY GDTSVIH +LKERH++L KVV+P+K R EILV
Sbjct: 320  NQEIAKAARDGLDSDRQLCYVAFDILYFGDTSVIHQTLKERHEILCKVVRPMKGRLEILV 379

Query: 903  PNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWL 1082
            PN G+N    SGEPCWS +A ++ +VERFFKETIENR+EG+VLKD  SKW+PSDRSGKWL
Sbjct: 380  PNAGINSHLTSGEPCWSFIAHNIDEVERFFKETIENRDEGIVLKDRSSKWEPSDRSGKWL 439

Query: 1083 KLKPDYIRAGSDLDVLII 1136
            KLKP+YI+AGSDLDVLII
Sbjct: 440  KLKPEYIQAGSDLDVLII 457


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Glycine max]
          Length = 1171

 Score =  637 bits (1643), Expect = e-180
 Identities = 307/378 (81%), Positives = 343/378 (90%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SRDSPDA+RL+NWRKGGA TG  AGNF  VA+E+LQRRQG  SGGLTI+ELNELLDRLAS
Sbjct: 79   SRDSPDALRLLNWRKGGAATGPTAGNFALVASEVLQRRQGTASGGLTIRELNELLDRLAS 138

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            +ENRAEKI +L  LI+KTN+QEMKWIIMI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 139  AENRAEKILVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 198

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DR+QRHKRQDIEVGKAVRPQLA RV+NA  AWKKLHGK+VVVECKFDGDRI
Sbjct: 199  LKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANATEAWKKLHGKDVVVECKFDGDRI 258

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNG++IHFFSRNFIDH EY HAMS II++N+LVDRCILDGEMLVWD S  RFAEFGS
Sbjct: 259  QIHKNGTEIHFFSRNFIDHSEYAHAMSEIIIQNVLVDRCILDGEMLVWDTSLKRFAEFGS 318

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAARDGLDSDRQLCYVAFDILY GDTS+IH +LKERH++L K+V+P+K R EILV
Sbjct: 319  NQEIAKAARDGLDSDRQLCYVAFDILYFGDTSLIHQTLKERHEILCKIVRPVKGRLEILV 378

Query: 903  PNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKWL 1082
            PN G+N    SGEPCWS +A +V +VERFFKETIENR+EG+VLKD  SKW+PSDRSGKWL
Sbjct: 379  PNAGINSHISSGEPCWSFIAHNVDEVERFFKETIENRDEGIVLKDHSSKWEPSDRSGKWL 438

Query: 1083 KLKPDYIRAGSDLDVLII 1136
            KLKP+YI+AGSDLDVLII
Sbjct: 439  KLKPEYIQAGSDLDVLII 456


>ref|XP_002325262.2| DNA ligase IV family protein [Populus trichocarpa]
            gi|550318700|gb|EEF03827.2| DNA ligase IV family protein
            [Populus trichocarpa]
          Length = 1242

 Score =  634 bits (1635), Expect = e-179
 Identities = 309/379 (81%), Positives = 345/379 (91%), Gaps = 1/379 (0%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAK-TGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLA 179
            SRDSPDA++LINWRKGGA  TG NAGNF  VAAE+LQRRQG  SGGLTI+ELN LLD+LA
Sbjct: 87   SRDSPDALKLINWRKGGANATGANAGNFSLVAAEVLQRRQGTVSGGLTIEELNGLLDKLA 146

Query: 180  SSENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTC 359
            SSENR EK ++L  LI KTN+QEMKWIIMI+LKDLKLG+SEKS+FHEFHPDAEDLFNVTC
Sbjct: 147  SSENRGEKTAVLAALINKTNTQEMKWIIMIILKDLKLGMSEKSVFHEFHPDAEDLFNVTC 206

Query: 360  DLRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDR 539
            DL+LVCEKL DR+QRHKRQDIEVGKAVRPQLAMRVS+A  AWKKLHGKEVVVECKFDGDR
Sbjct: 207  DLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAAWKKLHGKEVVVECKFDGDR 266

Query: 540  IQIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFG 719
            IQIHKNG+++H+FSRNF+DH EY H MS+II++N+L +RCILDGEMLVWD S NRFAEFG
Sbjct: 267  IQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQNVLDERCILDGEMLVWDTSLNRFAEFG 326

Query: 720  SNQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEIL 899
            SNQEIAKAARDGLDSDRQLCYVAFDILY GDTSVIH +LKERH+LL+KVVKP+K R EIL
Sbjct: 327  SNQEIAKAARDGLDSDRQLCYVAFDILYVGDTSVIHQTLKERHELLRKVVKPVKGRLEIL 386

Query: 900  VPNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKW 1079
            VPNGGLN  R  GEP  SL+A +V D+E+FFKETIENR+EG+VLKDLGSKW+PSDRSGKW
Sbjct: 387  VPNGGLNAHRLPGEPYCSLIAYNVDDIEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKW 446

Query: 1080 LKLKPDYIRAGSDLDVLII 1136
            LKLKP+YIRAGSDLDVLII
Sbjct: 447  LKLKPEYIRAGSDLDVLII 465


>ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata] gi|297312022|gb|EFH42446.1|
            ATLIG4 [Arabidopsis lyrata subsp. lyrata]
          Length = 1221

 Score =  634 bits (1634), Expect = e-179
 Identities = 305/381 (80%), Positives = 345/381 (90%), Gaps = 3/381 (0%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGG-AKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLA 179
            SRD+PDAVRL+NWRKGG AK G NAGNF  +AAE+LQRRQGM SGGLT+KELN+LLDRLA
Sbjct: 79   SRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMASGGLTVKELNDLLDRLA 138

Query: 180  SSENR--AEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNV 353
            SSENR  AEK  +L  LI+KTN+QEMKW+I I+LKDLKLG+SEKSIF EFHPDAEDLFNV
Sbjct: 139  SSENRCRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEKSIFQEFHPDAEDLFNV 198

Query: 354  TCDLRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDG 533
            TCDL+LVCEKL DR QRHKRQDIEVGKAVRPQLAMR+S+   AWKKLHGK+VV ECKFDG
Sbjct: 199  TCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRISDVNAAWKKLHGKDVVAECKFDG 258

Query: 534  DRIQIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAE 713
            DRIQIHKNG+DIH+FSRNF+DH EY HAMS++I++NILVD+CILDGEMLVWD S NRFAE
Sbjct: 259  DRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCILDGEMLVWDTSLNRFAE 318

Query: 714  FGSNQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFE 893
            FGSNQEIAKAAR+GLDS +QLCYVAFD+LY GDTSVIH SLKERH+LL+KVVKPLK R E
Sbjct: 319  FGSNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLKERHELLRKVVKPLKGRLE 378

Query: 894  ILVPNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSG 1073
            +LVP GGLN+ RPSGEP WS++  + +DVERFFKET+ENR+EGVVLKDLGSKW+P DRSG
Sbjct: 379  VLVPEGGLNVHRPSGEPSWSIVVHAAADVERFFKETVENRDEGVVLKDLGSKWEPGDRSG 438

Query: 1074 KWLKLKPDYIRAGSDLDVLII 1136
            KWLKLKP+YIRAG+DLDVLII
Sbjct: 439  KWLKLKPEYIRAGTDLDVLII 459


>ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
            gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA
            ligase 4; AltName: Full=DNA ligase IV; AltName:
            Full=Polydeoxyribonucleotide synthase [ATP] 4
            gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV
            [Arabidopsis thaliana] gi|332009474|gb|AED96857.1| DNA
            ligase 4 [Arabidopsis thaliana]
          Length = 1219

 Score =  633 bits (1633), Expect = e-179
 Identities = 302/379 (79%), Positives = 343/379 (90%), Gaps = 1/379 (0%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGG-AKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLA 179
            SRD+PDAVRL+NWRKGG AK G NAGNF  +AAE+LQRRQGM SGGLTIKELN+LLDRLA
Sbjct: 79   SRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMASGGLTIKELNDLLDRLA 138

Query: 180  SSENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTC 359
            SSENRAEK  +L  LI+KTN+QEMKW+I I+LKDLKLG+SEKSIF EFHPDAEDLFNVTC
Sbjct: 139  SSENRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEKSIFQEFHPDAEDLFNVTC 198

Query: 360  DLRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDR 539
            DL+LVCEKL DR QRHKRQDIEVGKAVRPQLAMR+ +   AWKKLHGK+VV ECKFDGDR
Sbjct: 199  DLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRIGDVNAAWKKLHGKDVVAECKFDGDR 258

Query: 540  IQIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFG 719
            IQIHKNG+DIH+FSRNF+DH EY HAMS++I++NILVD+CILDGEMLVWD S NRFAEFG
Sbjct: 259  IQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCILDGEMLVWDTSLNRFAEFG 318

Query: 720  SNQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEIL 899
            SNQEIAKAAR+GLDS +QLCYVAFD+LY GDTSVIH SLKERH+LL+KVVKPLK R E+L
Sbjct: 319  SNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLKERHELLKKVVKPLKGRLEVL 378

Query: 900  VPNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKW 1079
            VP GGLN+ RPSGEP WS++  + +DVERFFKET+ENR+EG+VLKDL SKW+P DRSGKW
Sbjct: 379  VPEGGLNVHRPSGEPSWSIVVHAAADVERFFKETVENRDEGIVLKDLESKWEPGDRSGKW 438

Query: 1080 LKLKPDYIRAGSDLDVLII 1136
            +KLKP+YIRAG+DLDVLII
Sbjct: 439  MKLKPEYIRAGADLDVLII 457


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score =  633 bits (1632), Expect = e-179
 Identities = 308/379 (81%), Positives = 345/379 (91%), Gaps = 1/379 (0%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAK-TGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLA 179
            SRDSPDA++LINWRKGGA  TG NAGNF  VAAE+LQRRQG  SGGLTI+ELN LLD+LA
Sbjct: 87   SRDSPDALKLINWRKGGANATGANAGNFSLVAAEVLQRRQGTVSGGLTIEELNGLLDKLA 146

Query: 180  SSENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTC 359
            SSENR +K ++L  LI KTN+QEMKWIIMI+LKDLKLG+SEKS+FHEFHPDAEDLFNVTC
Sbjct: 147  SSENRGDKTAVLAALINKTNTQEMKWIIMIILKDLKLGMSEKSVFHEFHPDAEDLFNVTC 206

Query: 360  DLRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDR 539
            DL+LVCEKL DR+QRHKRQDIEVGKAVRPQLAMRVS+A  AWKKLHGKEVVVECKFDGDR
Sbjct: 207  DLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAAWKKLHGKEVVVECKFDGDR 266

Query: 540  IQIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFG 719
            IQIHKNG+++H+FSRNF+DH EY H MS+II++N+L +RCILDGEMLVWD S NRFAEFG
Sbjct: 267  IQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQNVLDERCILDGEMLVWDTSLNRFAEFG 326

Query: 720  SNQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEIL 899
            SNQEIAKAARDGLDSDRQLCYVAFDILY GDTSVIH +LKERH+LL+KVVKP+K R EIL
Sbjct: 327  SNQEIAKAARDGLDSDRQLCYVAFDILYVGDTSVIHQTLKERHELLRKVVKPVKGRLEIL 386

Query: 900  VPNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGSKWDPSDRSGKW 1079
            VPNGGLN  R  GEP  SL+A +V D+E+FFKETIENR+EG+VLKDLGSKW+PSDRSGKW
Sbjct: 387  VPNGGLNAHRLPGEPYCSLIAYNVDDIEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKW 446

Query: 1080 LKLKPDYIRAGSDLDVLII 1136
            LKLKP+YIRAGSDLDVLII
Sbjct: 447  LKLKPEYIRAGSDLDVLII 465


>ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Citrus sinensis]
            gi|568840649|ref|XP_006474278.1| PREDICTED: DNA ligase
            4-like isoform X2 [Citrus sinensis]
          Length = 1174

 Score =  630 bits (1625), Expect = e-178
 Identities = 313/394 (79%), Positives = 344/394 (87%), Gaps = 16/394 (4%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            S+DS DAVRLINWRKGG  T  NAGNFP VAAE+LQRRQGM SGGLTIKELN+LLDRLAS
Sbjct: 81   SKDSADAVRLINWRKGG--TAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLAS 138

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            SENRAEK S+L  LI+KTN+QEMKWIIMI+LKDLKLG+SEKSIFHEFHPDAEDLFNVTCD
Sbjct: 139  SENRAEKTSVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 198

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DR+QRHKRQDIEVGKAVRPQLAMR+ +A  AW+KLHGKEVV+ECKFDGDRI
Sbjct: 199  LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRI 258

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNGS+IH+FSR+F+DH EYGHAMS II +N+LVDRCILDGEMLVWD S NRFAEFGS
Sbjct: 259  QIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGS 318

Query: 723  NQEIAKAARDGLDSDRQLCYVAFDILYDGDTSVIHLSLKERHDLLQKVVKPLKNRFEILV 902
            NQEIAKAARDGL SDRQLCY AFD+LY GDTSVIH SLKERH+LLQKVVKP K R E LV
Sbjct: 319  NQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLV 378

Query: 903  PNGGLNID-RP---------------SGEPCWSLLARSVSDVERFFKETIENREEGVVLK 1034
            P+ GLN   RP                GEPCWSL+A +V +VE+FFKETIENR+EG+VLK
Sbjct: 379  PDHGLNSHVRPQGKEHEMTDIPLPFNKGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 438

Query: 1035 DLGSKWDPSDRSGKWLKLKPDYIRAGSDLDVLII 1136
            DLGSKW+P DRSGKWLKLKP+YIRAGSDLDVLII
Sbjct: 439  DLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLII 472


>ref|XP_006850874.1| hypothetical protein AMTR_s00025p00149970 [Amborella trichopoda]
            gi|548854545|gb|ERN12455.1| hypothetical protein
            AMTR_s00025p00149970 [Amborella trichopoda]
          Length = 1120

 Score =  623 bits (1607), Expect = e-176
 Identities = 301/390 (77%), Positives = 347/390 (88%), Gaps = 12/390 (3%)
 Frame = +3

Query: 3    SRDSPDAVRLINWRKGGAKTGVNAGNFPNVAAEILQRRQGMTSGGLTIKELNELLDRLAS 182
            SR+S DA+RLINWRKGGAKTG NAGNF  VAAE+LQRRQGMTSGGLTIKE+N+LLDRLA+
Sbjct: 80   SRESEDALRLINWRKGGAKTGPNAGNFALVAAEVLQRRQGMTSGGLTIKEVNDLLDRLAA 139

Query: 183  SENRAEKISILGELIRKTNSQEMKWIIMILLKDLKLGVSEKSIFHEFHPDAEDLFNVTCD 362
            +ENR +K S+L ELI+KTNS EMKWI+MI+LKDLKLG+SEKSIF EFH DAEDLFNVTCD
Sbjct: 140  AENREQKTSVLSELIKKTNSVEMKWIVMIILKDLKLGISEKSIFREFHTDAEDLFNVTCD 199

Query: 363  LRLVCEKLCDRSQRHKRQDIEVGKAVRPQLAMRVSNAAVAWKKLHGKEVVVECKFDGDRI 542
            L+LVCEKL DR+QR+KRQDIE GKAVRPQLAMRV++A+ AWKKLHGK+VV+ECKFDGDRI
Sbjct: 200  LKLVCEKLKDRTQRNKRQDIEAGKAVRPQLAMRVADASSAWKKLHGKQVVIECKFDGDRI 259

Query: 543  QIHKNGSDIHFFSRNFIDHPEYGHAMSNIIMENILVDRCILDGEMLVWDKSANRFAEFGS 722
            QIHKNG+++ FFSRNFIDHPEYGHAMS++I++N+LV+RCILDGEMLVWD S NRFAEFGS
Sbjct: 260  QIHKNGNELCFFSRNFIDHPEYGHAMSSLILQNVLVERCILDGEMLVWDTSTNRFAEFGS 319

Query: 723  NQEIAKAARDGLDSDRQLCY------------VAFDILYDGDTSVIHLSLKERHDLLQKV 866
            NQEIAKA+ DG++ DRQLC             VAFDILY GDTSVIH SL+ERH+LL+KV
Sbjct: 320  NQEIAKASNDGIEGDRQLCCILCTGMCLLLDDVAFDILYVGDTSVIHQSLRERHELLRKV 379

Query: 867  VKPLKNRFEILVPNGGLNIDRPSGEPCWSLLARSVSDVERFFKETIENREEGVVLKDLGS 1046
            V+P+K R EILVP+GGLN+ RPS EPCWSL+A SV DVE+FFKETIENR+EG+VLKDL S
Sbjct: 380  VQPVKGRLEILVPDGGLNVRRPSDEPCWSLIAYSVEDVEKFFKETIENRDEGIVLKDLDS 439

Query: 1047 KWDPSDRSGKWLKLKPDYIRAGSDLDVLII 1136
            KW+P DRSGKWLKLKPDY+  GSDLDVLII
Sbjct: 440  KWEPGDRSGKWLKLKPDYVHTGSDLDVLII 469