BLASTX nr result
ID: Rheum21_contig00020318
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00020318
(451 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein ... 176 3e-42
gb|ABF74606.1| chloroplast chlorophyll a/b-binding protein [Agav... 176 3e-42
gb|EMS59660.1| Chlorophyll a-b binding protein, chloroplastic [T... 176 4e-42
gb|AFC91647.1| chloroplast chlorophyll A/B binding protein [Heve... 176 4e-42
ref|XP_002519724.1| chlorophyll A/B binding protein, putative [R... 176 4e-42
ref|XP_002524616.1| chlorophyll A/B binding protein, putative [R... 176 4e-42
gb|EXB44448.1| Chlorophyll a-b binding protein 16 [Morus notabilis] 175 5e-42
gb|AHB24929.1| chloroplast light-harvesting complex II chlorophy... 175 5e-42
gb|EXB69298.1| Chlorophyll a-b binding protein 40 [Morus notabilis] 175 6e-42
gb|EXB69297.1| Chlorophyll a-b binding protein 40 [Morus notabilis] 175 6e-42
emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [So... 175 6e-42
ref|XP_006587015.1| PREDICTED: chlorophyll a-b binding protein o... 175 6e-42
ref|XP_006467511.1| PREDICTED: chlorophyll a-b binding protein 3... 175 6e-42
ref|XP_006467509.1| PREDICTED: chlorophyll a-b binding protein 3... 175 6e-42
ref|XP_006368026.1| PREDICTED: chlorophyll a-b binding protein 1... 175 6e-42
ref|XP_006365560.1| PREDICTED: chlorophyll a-b binding protein 1... 175 6e-42
ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3... 175 6e-42
ref|XP_006356078.1| PREDICTED: chlorophyll a-b binding protein 3... 175 6e-42
ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3... 175 6e-42
ref|XP_006356074.1| PREDICTED: chlorophyll a-b binding protein 3... 175 6e-42
>gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 176 bits (446), Expect = 3e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG++ DPIYPGGSFDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 183 GGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 242
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
PIENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 243 PIENLADHLADPVNNNAWAFATNFVPGK 270
>gb|ABF74606.1| chloroplast chlorophyll a/b-binding protein [Agave tequilana]
Length = 186
Score = 176 bits (446), Expect = 3e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 99 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 158
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 159 PLENLADHLADPVNNNAWAFATNFVPGK 186
>gb|EMS59660.1| Chlorophyll a-b binding protein, chloroplastic [Triticum urartu]
Length = 322
Score = 176 bits (445), Expect = 4e-42
Identities = 82/98 (83%), Positives = 90/98 (91%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG++ DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 179 GGPLGEIVDPLYPGGSFDPLGLADDPKAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 238
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK*AVCQSPVFG 294
P+ENLADH+ADPVNNNAWAFATNF PGK + +S +FG
Sbjct: 239 PLENLADHIADPVNNNAWAFATNFAPGKCGLGRSLLFG 276
>gb|AFC91647.1| chloroplast chlorophyll A/B binding protein [Hevea brasiliensis]
Length = 265
Score = 176 bits (445), Expect = 4e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DPIYPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
>ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223541141|gb|EEF42697.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 265
Score = 176 bits (445), Expect = 4e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DPIYPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
>ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223536169|gb|EEF37824.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 265
Score = 176 bits (445), Expect = 4e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DPIYPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
>gb|EXB44448.1| Chlorophyll a-b binding protein 16 [Morus notabilis]
Length = 261
Score = 175 bits (444), Expect = 5e-42
Identities = 81/88 (92%), Positives = 86/88 (97%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V+DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 174 GGPLGEVSDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 233
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 234 PLENLADHLADPVNNNAWAYATNFVPGK 261
>gb|AHB24929.1| chloroplast light-harvesting complex II chlorophyll a/b binding
protein 1 [Sedum alfredii]
Length = 267
Score = 175 bits (444), Expect = 5e-42
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 180 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 239
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 240 PLENLADHLADPVNNNAWAFATNFVPGK 267
>gb|EXB69298.1| Chlorophyll a-b binding protein 40 [Morus notabilis]
Length = 265
Score = 175 bits (443), Expect = 6e-42
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DPIYPGGSFDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
>gb|EXB69297.1| Chlorophyll a-b binding protein 40 [Morus notabilis]
Length = 265
Score = 175 bits (443), Expect = 6e-42
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DPIYPGGSFDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
>emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [Solanum tuberosum]
Length = 267
Score = 175 bits (443), Expect = 6e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 180 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 239
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 240 PLENLADHLADPVNNNAWAFATNFVPGK 267
>ref|XP_006587015.1| PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like
[Glycine max]
Length = 98
Score = 175 bits (443), Expect = 6e-42
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DPIYPGGSFDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 11 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 70
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 71 PLENLADHLADPVNNNAWAYATNFVPGK 98
>ref|XP_006467511.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Citrus sinensis]
Length = 399
Score = 175 bits (443), Expect = 6e-42
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
Score = 175 bits (443), Expect = 6e-42
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 312 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 371
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 372 PLENLADHLADPVNNNAWAYATNFVPGK 399
>ref|XP_006467509.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Citrus sinensis]
Length = 264
Score = 175 bits (443), Expect = 6e-42
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 177 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 237 PLENLADHLADPVNNNAWAYATNFVPGK 264
>ref|XP_006368026.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Solanum tuberosum]
Length = 265
Score = 175 bits (443), Expect = 6e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAFATNFVPGK 265
>ref|XP_006365560.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Solanum tuberosum]
Length = 265
Score = 175 bits (443), Expect = 6e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAFATNFVPGK 265
>ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform X1 [Solanum tuberosum]
gi|565391644|ref|XP_006361531.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform X2
[Solanum tuberosum]
Length = 267
Score = 175 bits (443), Expect = 6e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 180 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 239
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 240 PLENLADHLADPVNNNAWAFATNFVPGK 267
>ref|XP_006356078.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 175 bits (443), Expect = 6e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 180 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 239
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 240 PLENLADHLADPVNNNAWAFATNFVPGK 267
>ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 175 bits (443), Expect = 6e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 180 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 239
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 240 PLENLADHLADPVNNNAWAFATNFVPGK 267
>ref|XP_006356074.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 175 bits (443), Expect = 6e-42
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 1 GGPLGDVNDPIYPGGSFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 180
GGPLG+V DP+YPGGSFDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 180 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 239
Query: 181 PIENLADHLADPVNNNAWAFATNFVPGK 264
P+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 240 PLENLADHLADPVNNNAWAFATNFVPGK 267