BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020317
         (364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006494026.1| PREDICTED: uncharacterized protein LOC102613...   226   2e-57
gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptas...   225   5e-57
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              224   1e-56
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   223   2e-56
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             223   3e-56
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     222   4e-56
emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]   221   1e-55
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   220   1e-55
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   220   1e-55
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   220   2e-55
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         219   2e-55
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752...   219   3e-55
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       219   4e-55
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]   219   4e-55
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   219   4e-55
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624...   218   5e-55
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...   218   5e-55
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...   218   5e-55
emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]   218   9e-55
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   218   9e-55

>ref|XP_006494026.1| PREDICTED: uncharacterized protein LOC102613249 [Citrus sinensis]
          Length = 559

 Score =  226 bits (576), Expect = 2e-57
 Identities = 102/118 (86%), Positives = 114/118 (96%)
 Frame = +3

Query: 6   VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
           VPV+LVPKKDG+WRMCVDCRAIN+IT+KYRH IP LDDMLDELHG+ VFSKI+LKSGYHQ
Sbjct: 388 VPVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDELHGSCVFSKIDLKSGYHQ 447

Query: 186 IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDD 359
           IR++EGDEWKTAFKTKYGLYEWLVMPFGL+NAPSTFMRLMNHVLR F+GKF++VYFDD
Sbjct: 448 IRIREGDEWKTAFKTKYGLYEWLVMPFGLSNAPSTFMRLMNHVLRAFIGKFVVVYFDD 505


>gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 386

 Score =  225 bits (573), Expect = 5e-57
 Identities = 102/119 (85%), Positives = 113/119 (94%)
 Frame = +3

Query: 6   VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
           +PVILVPKKDG+WRMC +CRAIN ITIKYRH IP LDDMLDELHGA VFSKI+LKSGYHQ
Sbjct: 236 MPVILVPKKDGTWRMCTNCRAINNITIKYRHPIPRLDDMLDELHGACVFSKIDLKSGYHQ 295

Query: 186 IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
           IR++EGDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMNH+LR F+GKF++VYFDDI
Sbjct: 296 IRIREGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHILRHFIGKFVVVYFDDI 354


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  224 bits (570), Expect = 1e-56
 Identities = 102/119 (85%), Positives = 112/119 (94%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VPV+LVPKKDGSWRMCVDCRAIN IT+KYRH IP LDDMLDELHG+ +FSK++LKSGYHQ
Sbjct: 948  VPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSSIFSKVDLKSGYHQ 1007

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            IRM+EGDEWKTAFKT  GLYEWLVMPFGLTNAPSTFMRLMNHVLR F+G+F+IVYFDDI
Sbjct: 1008 IRMKEGDEWKTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDI 1066


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  223 bits (569), Expect = 2e-56
 Identities = 101/119 (84%), Positives = 113/119 (94%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VPV+LVPKKDG+WRMCVDCRAIN IT+KYR+ IP LDDMLDELHGA +FSKI+L+ GYHQ
Sbjct: 699  VPVLLVPKKDGTWRMCVDCRAINNITVKYRYPIPRLDDMLDELHGAKIFSKIDLRRGYHQ 758

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            IRMQ+GDEWKTAFKTK GLYEWLVMPFGLTNAPSTFMRLMNHVLR+F+GKF++VYFDDI
Sbjct: 759  IRMQKGDEWKTAFKTKNGLYEWLVMPFGLTNAPSTFMRLMNHVLRNFIGKFVVVYFDDI 817


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  223 bits (567), Expect = 3e-56
 Identities = 101/119 (84%), Positives = 113/119 (94%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VP+ILVPKKDGSWRMC DCRAI+ ITIKYRH IP LDD+LDEL GA +FSKI+LKSGYHQ
Sbjct: 646  VPIILVPKKDGSWRMCTDCRAISNITIKYRHPIPRLDDLLDELFGACLFSKIDLKSGYHQ 705

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            IR++EGDEWKTAFKTK+GLYEW+VMPFGLTNAPSTFMRLMNHVLR+FLGKF++VYFDDI
Sbjct: 706  IRIREGDEWKTAFKTKFGLYEWMVMPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDI 764


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  222 bits (566), Expect = 4e-56
 Identities = 101/119 (84%), Positives = 113/119 (94%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VPVILVPKKDGSWRMCVDCRAIN IT++YRH IP LDDMLDEL G+M+FSKI+L+SG+HQ
Sbjct: 759  VPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIFSKIDLRSGFHQ 818

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            IRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMNHVLR F+GKF++VYFDDI
Sbjct: 819  IRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDI 877


>emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]
          Length = 1115

 Score =  221 bits (562), Expect = 1e-55
 Identities = 99/119 (83%), Positives = 110/119 (92%)
 Frame = +3

Query: 6   VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
           VPV+LVPKKDG+WRMCVDCRAIN IT+KYRH IP LDDMLDELHG+ VF+KI+LKS YHQ
Sbjct: 422 VPVLLVPKKDGTWRMCVDCRAINNITVKYRHXIPRLDDMLDELHGSCVFTKIDLKSXYHQ 481

Query: 186 IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
           IRM+EGDEWK AFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH L  F+G+F++VYFDDI
Sbjct: 482 IRMKEGDEWKIAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALHSFIGRFVLVYFDDI 540


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  220 bits (561), Expect = 1e-55
 Identities = 100/120 (83%), Positives = 112/120 (93%)
 Frame = +3

Query: 3    TVPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYH 182
            +VPV+LVPKKDG+WRMCVDCRAIN+IT+KYRH IP LDDMLD+L G+ +FSKI+LKSGYH
Sbjct: 738  SVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYH 797

Query: 183  QIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            QIR+  GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHV +DF GKFI+VYFDDI
Sbjct: 798  QIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDI 857


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  220 bits (561), Expect = 1e-55
 Identities = 100/120 (83%), Positives = 112/120 (93%)
 Frame = +3

Query: 3    TVPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYH 182
            +VPV+LVPKKDG+WRMCVDCRAIN+IT+KYRH IP LDDMLD+L G+ +FSKI+LKSGYH
Sbjct: 738  SVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYH 797

Query: 183  QIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            QIR+  GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHV +DF GKFI+VYFDDI
Sbjct: 798  QIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDI 857


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  220 bits (560), Expect = 2e-55
 Identities = 101/119 (84%), Positives = 112/119 (94%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VPVILVPKKDGSWRMCVDCRAIN ITI+YRH IP LDDMLDEL G++VFSK++L+SGYHQ
Sbjct: 756  VPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQ 815

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            IRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN VLR F+GKF++VYFDDI
Sbjct: 816  IRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDI 874



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
 Frame = +3

Query: 177  YHQIRMQEGDEWKT--AFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVY 350
            +H+     GD+  T  +    YGLYE+ VM FGLTNAP+ FM LMN V  ++L KF++V+
Sbjct: 1603 HHKFAATIGDDRATNPSGFASYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVF 1662

Query: 351  FDDI 362
             DDI
Sbjct: 1663 IDDI 1666


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  219 bits (559), Expect = 2e-55
 Identities = 101/119 (84%), Positives = 112/119 (94%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VPVILVPKKDG+WRMCVDCRAIN ITI+YRH IP LDDMLDEL GA+VFSK++L+SGYHQ
Sbjct: 759  VPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGAIVFSKVDLRSGYHQ 818

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            IRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN VLR F+GKF++VYFDDI
Sbjct: 819  IRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDI 877


>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
          Length = 1295

 Score =  219 bits (558), Expect = 3e-55
 Identities = 99/119 (83%), Positives = 112/119 (94%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VPV+LVPKKDGSWRMCVDCRAIN IT++YRH IP LDDMLDEL G+ +F+KI+L+SGYHQ
Sbjct: 825  VPVLLVPKKDGSWRMCVDCRAINAITVRYRHPIPRLDDMLDELSGSTIFTKIDLRSGYHQ 884

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            IRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMNHVLR F+GKF++VYFDDI
Sbjct: 885  IRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDI 943


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  219 bits (557), Expect = 4e-55
 Identities = 100/120 (83%), Positives = 113/120 (94%)
 Frame = +3

Query: 3    TVPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYH 182
            +VPV+LVPKKDGSWRMCVDCRAIN ITI+YRH IP LDDMLDEL G++VFSKI+L+SGYH
Sbjct: 783  SVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYH 842

Query: 183  QIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            QIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN VLR F+G+F++VYFDDI
Sbjct: 843  QIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDI 902


>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
          Length = 960

 Score =  219 bits (557), Expect = 4e-55
 Identities = 100/117 (85%), Positives = 110/117 (94%)
 Frame = +3

Query: 12  VILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQIR 191
           V+LVPKKDG+WRMCVDCRAIN IT+KYRH IP LDDMLDELHG+ VF KI+LKSGYHQIR
Sbjct: 238 VLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSCVFIKIDLKSGYHQIR 297

Query: 192 MQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
           M+EGDEWKTAFKTKYGLYEWLVMPFGLTNA STFMRLMNHVLR F+G+F++VYFDDI
Sbjct: 298 MKEGDEWKTAFKTKYGLYEWLVMPFGLTNALSTFMRLMNHVLRAFIGRFVVVYFDDI 354


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  219 bits (557), Expect = 4e-55
 Identities = 100/120 (83%), Positives = 113/120 (94%)
 Frame = +3

Query: 3    TVPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYH 182
            +VPV+LVPKKDGSWRMCVDCRAIN ITI+YRH IP LDDMLDEL G++VFSKI+L+SGYH
Sbjct: 783  SVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYH 842

Query: 183  QIRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            QIRM+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN VLR F+G+F++VYFDDI
Sbjct: 843  QIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDI 902


>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
          Length = 1083

 Score =  218 bits (556), Expect = 5e-55
 Identities = 98/118 (83%), Positives = 112/118 (94%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VPV+LVPKKDG+WRMCVDCRAIN+IT+KYRH +P LDDMLDELHG+ VFSKI+LKSGYHQ
Sbjct: 675  VPVLLVPKKDGTWRMCVDCRAINKITVKYRHPMPRLDDMLDELHGSCVFSKIDLKSGYHQ 734

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDD 359
            IR++EGDEWKTAFKTKY LYEWL+MPFGL+NAP TFMRLMNHVLR F+GKF++VYFDD
Sbjct: 735  IRIREGDEWKTAFKTKYRLYEWLMMPFGLSNAPITFMRLMNHVLRAFIGKFVVVYFDD 792



 Score =  206 bits (523), Expect = 3e-51
 Identities = 92/112 (82%), Positives = 106/112 (94%)
 Frame = +3

Query: 27  KKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQIRMQEGD 206
           ++DG+WRMCVDCRAIN+IT+KYRH +P LDDMLDELHG+ VFSKI+LKSGYHQIR++EGD
Sbjct: 463 RQDGTWRMCVDCRAINKITVKYRHPMPRLDDMLDELHGSCVFSKIDLKSGYHQIRIREGD 522

Query: 207 EWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
           EWKTAFKTKYGLYEWLVMPFGL+NAPSTFMRLMN VLR F+ KF++VYFDDI
Sbjct: 523 EWKTAFKTKYGLYEWLVMPFGLSNAPSTFMRLMNDVLRAFISKFVVVYFDDI 574


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score =  218 bits (556), Expect = 5e-55
 Identities = 100/119 (84%), Positives = 111/119 (93%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VPVILVPKKDGSWRMCVDCRAIN ITI+YRH IP LDDMLDEL G++VFSK++L+SGYHQ
Sbjct: 1089 VPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQ 1148

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            IRM+ GDEWKT FKTK+GLYEWLVMPFGLTNAPSTFMRLMN VLR F+GKF++VYFDDI
Sbjct: 1149 IRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDI 1207


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score =  218 bits (556), Expect = 5e-55
 Identities = 100/119 (84%), Positives = 111/119 (93%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VPVILVPKKDGSWRMCVDCRAIN ITI+YRH IP LDDMLDEL G++VFSK++L+SGYHQ
Sbjct: 1098 VPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQ 1157

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            IRM+ GDEWKT FKTK+GLYEWLVMPFGLTNAPSTFMRLMN VLR F+GKF++VYFDDI
Sbjct: 1158 IRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDI 1216


>emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]
          Length = 771

 Score =  218 bits (554), Expect = 9e-55
 Identities = 98/119 (82%), Positives = 109/119 (91%)
 Frame = +3

Query: 6   VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
           V V+LVP KDG+WRMCVDCRAIN I +KYRH IP LDDMLDELHG+ VF+KI+LKSGYHQ
Sbjct: 143 VLVLLVPNKDGTWRMCVDCRAINNIMVKYRHPIPRLDDMLDELHGSCVFTKIDLKSGYHQ 202

Query: 186 IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
           IRM+EGDEWKT FKTKYGLYEWLVMPFGLTNAPSTFMRLMNH LR F+G+F++VYFDDI
Sbjct: 203 IRMKEGDEWKTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRSFIGRFVVVYFDDI 261


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  218 bits (554), Expect = 9e-55
 Identities = 100/119 (84%), Positives = 110/119 (92%)
 Frame = +3

Query: 6    VPVILVPKKDGSWRMCVDCRAINQITIKYRHLIPLLDDMLDELHGAMVFSKINLKSGYHQ 185
            VPVILVPKKDGSWRMCVDCRAIN ITI+YRH IP LDDMLDEL G++VFSK+ L+SGYHQ
Sbjct: 735  VPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVELRSGYHQ 794

Query: 186  IRMQEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGKFIIVYFDDI 362
            I M+ GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN VLR F+GKF++VYFDDI
Sbjct: 795  IHMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDI 853