BLASTX nr result
ID: Rheum21_contig00020272
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00020272
(242 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ10907.1| hypothetical protein PRUPE_ppa012472mg [Prunus pe... 119 4e-25
gb|EMJ07227.1| hypothetical protein PRUPE_ppa012488mg [Prunus pe... 119 4e-25
gb|ESW22095.1| hypothetical protein PHAVU_005G126800g [Phaseolus... 119 5e-25
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot... 117 1e-24
ref|XP_006362244.1| PREDICTED: probable ribosome biogenesis prot... 117 2e-24
ref|XP_004249160.1| PREDICTED: probable ribosome biogenesis prot... 117 2e-24
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin... 116 3e-24
gb|EPS74342.1| hypothetical protein M569_00414 [Genlisea aurea] 114 1e-23
ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis prot... 114 2e-23
ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis prot... 113 2e-23
ref|XP_003606254.1| Ribosome biogenesis protein rlp24 [Medicago ... 113 2e-23
ref|XP_004294469.1| PREDICTED: probable ribosome biogenesis prot... 111 9e-23
ref|XP_004487524.1| PREDICTED: probable ribosome biogenesis prot... 111 1e-22
ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot... 111 1e-22
emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera] 111 1e-22
ref|XP_002527762.1| 60S ribosomal protein L24, putative [Ricinus... 110 1e-22
ref|XP_002312895.1| hypothetical protein POPTR_0009s15070g [Popu... 110 1e-22
ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot... 110 1e-22
emb|CAN62312.1| hypothetical protein VITISV_018204 [Vitis vinifera] 110 1e-22
ref|XP_006493421.1| PREDICTED: probable ribosome biogenesis prot... 109 3e-22
>gb|EMJ10907.1| hypothetical protein PRUPE_ppa012472mg [Prunus persica]
Length = 168
Score = 119 bits (298), Expect = 4e-25
Identities = 60/79 (75%), Positives = 66/79 (83%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL TLKAI KI KVR DR+ +H EKRMKGKKA
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLTANTLKAIKKIDKVRVDREARHHEKRMKGKKAKE 119
Query: 62 MKDSLKELQQSISLVKTPS 6
+++ KEL+QSISLVK PS
Sbjct: 120 HREAAKELEQSISLVKAPS 138
>gb|EMJ07227.1| hypothetical protein PRUPE_ppa012488mg [Prunus persica]
Length = 167
Score = 119 bits (298), Expect = 4e-25
Identities = 59/80 (73%), Positives = 69/80 (86%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + TLKAI KI KVR R+++H EKRMKGKKA
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLTENTLKAIKKIDKVRIIREERHHEKRMKGKKAKE 119
Query: 62 MKDSLKELQQSISLVKTPSA 3
++++KEL+QSISLVK P+A
Sbjct: 120 NREAVKELEQSISLVKAPTA 139
>gb|ESW22095.1| hypothetical protein PHAVU_005G126800g [Phaseolus vulgaris]
Length = 168
Score = 119 bits (297), Expect = 5e-25
Identities = 56/79 (70%), Positives = 67/79 (84%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL LKAIPKI K+R R+++H + RMKGKK +
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLADNVLKAIPKIEKIRVTREERHHKNRMKGKKEKL 119
Query: 62 MKDSLKELQQSISLVKTPS 6
+K+++KEL+QSISLVK PS
Sbjct: 120 LKEAVKELEQSISLVKAPS 138
>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
max]
Length = 168
Score = 117 bits (294), Expect = 1e-24
Identities = 55/79 (69%), Positives = 67/79 (84%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + LKAIPKI K+R R+++H + RMKGKK +
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKL 119
Query: 62 MKDSLKELQQSISLVKTPS 6
+K+++KEL+Q ISLVK PS
Sbjct: 120 LKEAVKELEQGISLVKAPS 138
>ref|XP_006362244.1| PREDICTED: probable ribosome biogenesis protein RLP24-like isoform
X1 [Solanum tuberosum] gi|565393150|ref|XP_006362245.1|
PREDICTED: probable ribosome biogenesis protein
RLP24-like isoform X2 [Solanum tuberosum]
Length = 166
Score = 117 bits (293), Expect = 2e-24
Identities = 56/79 (70%), Positives = 66/79 (83%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRN+ TLKAI KI K+R DR+++HI KRMKGKKA
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNVTVNTLKAIKKIDKIRVDREERHITKRMKGKKAKE 119
Query: 62 MKDSLKELQQSISLVKTPS 6
+++ KEL+QSI +VK PS
Sbjct: 120 QREATKELEQSIHMVKAPS 138
>ref|XP_004249160.1| PREDICTED: probable ribosome biogenesis protein RLP24-like isoform
1 [Solanum lycopersicum]
gi|460407442|ref|XP_004249161.1| PREDICTED: probable
ribosome biogenesis protein RLP24-like isoform 2
[Solanum lycopersicum]
Length = 166
Score = 117 bits (292), Expect = 2e-24
Identities = 55/79 (69%), Positives = 66/79 (83%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRN+ + TLKAI KI K+R DR+++HI KRMKG KA
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNVTENTLKAIKKIDKIRVDREERHIAKRMKGNKAKE 119
Query: 62 MKDSLKELQQSISLVKTPS 6
+++ KEL+QSI +VK PS
Sbjct: 120 QREATKELEQSIHMVKAPS 138
>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
gi|255627233|gb|ACU13961.1| unknown [Glycine max]
Length = 168
Score = 116 bits (291), Expect = 3e-24
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + LK IPKI K+R R+++H + RMKGKK +
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKL 119
Query: 62 MKDSLKELQQSISLVKTPS 6
+K+++KEL+Q ISLVK PS
Sbjct: 120 LKEAVKELEQGISLVKAPS 138
>gb|EPS74342.1| hypothetical protein M569_00414 [Genlisea aurea]
Length = 162
Score = 114 bits (286), Expect = 1e-23
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQD+TFEFERKRNRPERYDRN+++ TLKAI KI KVR DR+ +H KRM GKKA +
Sbjct: 60 GKDMTQDATFEFERKRNRPERYDRNVVENTLKAIKKIDKVRVDREARHHAKRMSGKKAQL 119
Query: 62 MKDSLKELQQSISLVKTPSA 3
++++KEL QSI LVK P++
Sbjct: 120 TREAVKELDQSIHLVKAPAS 139
>ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
max]
Length = 168
Score = 114 bits (284), Expect = 2e-23
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + LKAIPKI K+R R++KH + RMKGKK +
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREEKHHKNRMKGKKQKL 119
Query: 62 MKDSLKELQQSISLVKTPS 6
++ +EL+Q ISLVK PS
Sbjct: 120 QMEAARELEQGISLVKAPS 138
>ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis protein RLP24-like isoform
X1 [Glycine max] gi|571489011|ref|XP_006591091.1|
PREDICTED: probable ribosome biogenesis protein
RLP24-like isoform X2 [Glycine max]
Length = 169
Score = 113 bits (283), Expect = 2e-23
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + LKAIPKI K+R R++KH + RMKGKK +
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVAREEKHHKNRMKGKKQKL 119
Query: 62 MKDSLKELQQSISLVKTPS 6
++++EL+Q ISLVK PS
Sbjct: 120 HMEAVRELEQGISLVKAPS 138
>ref|XP_003606254.1| Ribosome biogenesis protein rlp24 [Medicago truncatula]
gi|217075426|gb|ACJ86073.1| unknown [Medicago
truncatula] gi|355507309|gb|AES88451.1| Ribosome
biogenesis protein rlp24 [Medicago truncatula]
gi|388495992|gb|AFK36062.1| unknown [Medicago
truncatula]
Length = 162
Score = 113 bits (283), Expect = 2e-23
Identities = 55/80 (68%), Positives = 63/80 (78%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL +E LKAIPKI K++ R + H RMKGKK V
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLTEEVLKAIPKIAKIQVSRAESHHAIRMKGKKKKV 119
Query: 62 MKDSLKELQQSISLVKTPSA 3
K++ KE +QSI L+K PSA
Sbjct: 120 QKEAAKEYEQSIHLLKAPSA 139
>ref|XP_004294469.1| PREDICTED: probable ribosome biogenesis protein RLP24-like
[Fragaria vesca subsp. vesca]
Length = 163
Score = 111 bits (278), Expect = 9e-23
Identities = 55/80 (68%), Positives = 64/80 (80%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + TLKAI KI KVR DR+ KH EKRMKG+K +
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREAKHHEKRMKGRKTKI 119
Query: 62 MKDSLKELQQSISLVKTPSA 3
+ KEL QSI++V+ P +
Sbjct: 120 GDQARKELIQSINMVQAPDS 139
>ref|XP_004487524.1| PREDICTED: probable ribosome biogenesis protein RLP24-like isoform
X1 [Cicer arietinum] gi|502083657|ref|XP_004487525.1|
PREDICTED: probable ribosome biogenesis protein
RLP24-like isoform X2 [Cicer arietinum]
Length = 168
Score = 111 bits (277), Expect = 1e-22
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL LKAIPKI K+R R+++H + RMK +A
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLADNVLKAIPKIDKIRVSREERHHKNRMKENEAKG 119
Query: 62 MKDSLKELQQSISLVKTPSA 3
+++ KEL+QSISLVK PSA
Sbjct: 120 QREAKKELEQSISLVKAPSA 139
>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
product [Vitis vinifera]
Length = 168
Score = 111 bits (277), Expect = 1e-22
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRN+ + TLKAI KI KVR DR+ +H RMKGKKA
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKE 119
Query: 62 MKDSLKELQQSISLVKTPS 6
+++ KEL+QSI +VK P+
Sbjct: 120 QREAAKELEQSIHMVKAPA 138
>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
Length = 1073
Score = 111 bits (277), Expect = 1e-22
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRN+ + TLKAI KI KVR DR+ +H RMKGKKA
Sbjct: 116 GKDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKE 175
Query: 62 MKDSLKELQQSISLVKTPS 6
+++ KEL+QSI +VK P+
Sbjct: 176 QREAAKELEQSIHMVKAPA 194
>ref|XP_002527762.1| 60S ribosomal protein L24, putative [Ricinus communis]
gi|223532849|gb|EEF34623.1| 60S ribosomal protein L24,
putative [Ricinus communis]
Length = 165
Score = 110 bits (276), Expect = 1e-22
Identities = 55/79 (69%), Positives = 63/79 (79%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + TLKAI I KVR+ RQ KHIEKR KG KA
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKTIDKVRSRRQIKHIEKRWKGNKAKE 119
Query: 62 MKDSLKELQQSISLVKTPS 6
+++ KE++Q I +VK PS
Sbjct: 120 LEEKRKEVEQDIHMVKAPS 138
>ref|XP_002312895.1| hypothetical protein POPTR_0009s15070g [Populus trichocarpa]
gi|118482826|gb|ABK93329.1| unknown [Populus
trichocarpa] gi|222849303|gb|EEE86850.1| hypothetical
protein POPTR_0009s15070g [Populus trichocarpa]
Length = 168
Score = 110 bits (276), Expect = 1e-22
Identities = 55/78 (70%), Positives = 63/78 (80%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + TLKAI KI KVR+DR HIEKR+K +K
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRSDRAANHIEKRLKVRKGKE 119
Query: 62 MKDSLKELQQSISLVKTP 9
+++ KEL+QSI LVK P
Sbjct: 120 RREAQKELEQSIHLVKAP 137
>ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
vinifera] gi|297740070|emb|CBI30252.3| unnamed protein
product [Vitis vinifera]
Length = 168
Score = 110 bits (276), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + TLKAI KI KVR DR+ +H RMKGKKA
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRMKGKKAKE 119
Query: 62 MKDSLKELQQSISLVKTPS 6
+++ KEL+Q I +VK P+
Sbjct: 120 QREAAKELEQGIHMVKAPA 138
>emb|CAN62312.1| hypothetical protein VITISV_018204 [Vitis vinifera]
Length = 753
Score = 110 bits (276), Expect = 1e-22
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + TLKAI KI KVR DR+ +H RMKGKKA
Sbjct: 89 GKDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRMKGKKAKE 148
Query: 62 MKDSLKELQQSISLVKTPS 6
+++ KEL+Q I +VK P+
Sbjct: 149 QREAAKELEQGIHMVKAPA 167
>ref|XP_006493421.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Citrus
sinensis]
Length = 167
Score = 109 bits (273), Expect = 3e-22
Identities = 54/79 (68%), Positives = 63/79 (79%)
Frame = -1
Query: 242 GKDMTQDSTFEFERKRNRPERYDRNLIQETLKAIPKIVKVRADRQDKHIEKRMKGKKAMV 63
GKDMTQDSTFEFERKRNRPERYDRNL + TLKAI KI K+R R+++H + RMKGKKA
Sbjct: 60 GKDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKIRVAREERHHKLRMKGKKAKE 119
Query: 62 MKDSLKELQQSISLVKTPS 6
K++ EL+Q I LVK PS
Sbjct: 120 QKEAAIELEQGIHLVKAPS 138