BLASTX nr result
ID: Rheum21_contig00020257
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00020257
(338 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 101 1e-19
gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indi... 99 4e-19
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam... 99 8e-19
gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [... 98 1e-18
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam... 98 1e-18
ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein A... 97 2e-18
ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein A... 97 2e-18
gb|EMJ21280.1| hypothetical protein PRUPE_ppa024663mg [Prunus pe... 96 5e-18
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A... 95 1e-17
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe... 95 1e-17
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 95 1e-17
gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [... 94 1e-17
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 94 2e-17
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 93 4e-17
gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus pe... 92 5e-17
ref|XP_006492487.1| PREDICTED: uncharacterized protein LOC102625... 92 7e-17
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 92 7e-17
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 92 7e-17
gb|ABN07997.1| contains similarity to reverse trancriptase , rel... 92 7e-17
gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [... 91 1e-16
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 101 bits (251), Expect = 1e-19
Identities = 45/85 (52%), Positives = 59/85 (69%)
Frame = -3
Query: 303 KIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHTD 124
KIHW L +SK GG+GFRD FNL++L++Q WRLL NP S+ G +LKARYFPH+D
Sbjct: 416 KIHWISWEKLTQSKEKGGLGFRDLHLFNLAMLSRQAWRLLTNPDSLCGQVLKARYFPHSD 475
Query: 123 VLHSSLGSHPSFIWRSIFKSICVVK 49
+LH S S+ WRSI K + ++K
Sbjct: 476 ILHCSPRPRISYTWRSILKGVALLK 500
>gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indica Group]
Length = 398
Score = 99.4 bits (246), Expect = 4e-19
Identities = 47/98 (47%), Positives = 64/98 (65%)
Frame = -3
Query: 303 KIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHTD 124
KIHW L SK NGG+GFRD FN+++LA+Q WRLL NP ++ +LKA+Y+PHTD
Sbjct: 31 KIHWLSWEKLTMSKENGGLGFRDLHLFNIAMLARQAWRLLTNPGTLCARVLKAKYYPHTD 90
Query: 123 VLHSSLGSHPSFIWRSIFKSICVVKREMGCS*GEITWL 10
VLHSS S+ WRSI K + ++K + G++ L
Sbjct: 91 VLHSSAKDGISYSWRSILKGVELLKEGLIWRVGDVNSL 128
>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/81 (56%), Positives = 56/81 (69%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+KIHW LC+SKL GGMGFR + FN +LLAKQ WRL+ P S+V + KARYFP T
Sbjct: 83 RKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFPQT 142
Query: 126 DVLHSSLGSHPSFIWRSIFKS 64
L + +GS+PSF WRSI S
Sbjct: 143 SFLDALVGSNPSFTWRSIVGS 163
>gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
Length = 925
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/90 (50%), Positives = 65/90 (72%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+KIHW + LC++K GGMGFR + FN+++LAKQ WRL+ NP S+ +LKA+YFPHT
Sbjct: 403 RKIHWMRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPHT 462
Query: 126 DVLHSSLGSHPSFIWRSIFKSICVVKREMG 37
+ ++LGS PS +W+SI+ + V+ EMG
Sbjct: 463 NFWEATLGSRPSCVWKSIWTARKVL--EMG 490
>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/81 (56%), Positives = 55/81 (67%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+KIHW LC+SKL GGMGFR + FN +LLAKQ WRL P S+V + KARYFP T
Sbjct: 83 RKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYFPQT 142
Query: 126 DVLHSSLGSHPSFIWRSIFKS 64
L + +GS+PSF WRSI S
Sbjct: 143 SFLDALVGSNPSFTWRSIVGS 163
>ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 387
Score = 97.4 bits (241), Expect = 2e-18
Identities = 42/78 (53%), Positives = 57/78 (73%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+ IHW + LC +K GG+GFR+F FN +L+AKQ WR+L N S++ ILKA+YF HT
Sbjct: 179 RSIHWARWEKLCSAKTRGGLGFREFSSFNQALIAKQGWRVLHNLDSLMAKILKAKYFKHT 238
Query: 126 DVLHSSLGSHPSFIWRSI 73
D + + LGS+PSF+WRSI
Sbjct: 239 DFMEAKLGSNPSFVWRSI 256
>ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 478
Score = 97.4 bits (241), Expect = 2e-18
Identities = 42/78 (53%), Positives = 57/78 (73%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+ IHW + LC +K GG+GFR+F FN +L+AKQ WR+L N S++ ILKA+YF HT
Sbjct: 270 RSIHWARWEKLCSAKTRGGLGFREFSSFNQALIAKQGWRVLHNLDSLMAKILKAKYFKHT 329
Query: 126 DVLHSSLGSHPSFIWRSI 73
D + + LGS+PSF+WRSI
Sbjct: 330 DFMEAKLGSNPSFVWRSI 347
>gb|EMJ21280.1| hypothetical protein PRUPE_ppa024663mg [Prunus persica]
Length = 681
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/86 (51%), Positives = 59/86 (68%)
Frame = -3
Query: 300 IHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHTDV 121
IHW LC +K GG+GFRD +FNL+LLAKQ WR+++NP + ILKARYFP TD
Sbjct: 217 IHWKSWKKLCLAKKVGGLGFRDLSNFNLALLAKQSWRIILNPEAAWVKILKARYFPTTDF 276
Query: 120 LHSSLGSHPSFIWRSIFKSICVVKRE 43
LH++ GS PS+ W S+ + I + +E
Sbjct: 277 LHATKGSRPSWAWVSLLEGITAMMKE 302
>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 494
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = -3
Query: 315 KSIKKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYF 136
K K I W + + +K+ GGMGFRD FN +L+AKQ WRL+ NP S+ +LKARY
Sbjct: 27 KDKKGIPWTRWEEMSRAKIRGGMGFRDISSFNQALVAKQSWRLIQNPESLAARVLKARYL 86
Query: 135 PHTDVLHSSLGSHPSFIWRSI 73
P TD L +S+GS+PS+IWRSI
Sbjct: 87 PKTDFLRASIGSNPSYIWRSI 107
>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/90 (48%), Positives = 64/90 (71%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+KIHW + LC++K GGMGFR + FN+++LAKQ WRL+ NP S+ +LKA+YFP T
Sbjct: 772 RKIHWMRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPQT 831
Query: 126 DVLHSSLGSHPSFIWRSIFKSICVVKREMG 37
+ ++LGS PS +W+SI+ + V+ EMG
Sbjct: 832 NFWEATLGSRPSCVWKSIWTARKVL--EMG 859
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/90 (48%), Positives = 64/90 (71%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+KIHW + LC++K GGMGFR + FN+++LAKQ WRL+ NP S+ +LKA+YFP T
Sbjct: 1252 RKIHWMRWERLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPQT 1311
Query: 126 DVLHSSLGSHPSFIWRSIFKSICVVKREMG 37
+ ++LGS PS +W+SI+ + V+ EMG
Sbjct: 1312 NFWEATLGSRPSCVWKSIWTARKVL--EMG 1339
>gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
Length = 1367
Score = 94.4 bits (233), Expect = 1e-17
Identities = 41/88 (46%), Positives = 62/88 (70%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+KIHW + LC K GG+GFR+ FN++LLAKQ+WRL+ P S+V ILKARYF +
Sbjct: 1083 RKIHWLSWNKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVARILKARYFKNC 1142
Query: 126 DVLHSSLGSHPSFIWRSIFKSICVVKRE 43
+L + +G PS+IW+S+ K+ ++++E
Sbjct: 1143 SILEAQIGHSPSYIWQSLCKARVLIEKE 1170
>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 93.6 bits (231), Expect = 2e-17
Identities = 43/81 (53%), Positives = 55/81 (67%)
Frame = -3
Query: 315 KSIKKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYF 136
K + IHW K LC+SK GG+GFRD E FN +LLAKQ WR+L P S+V I +ARY
Sbjct: 534 KDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYH 593
Query: 135 PHTDVLHSSLGSHPSFIWRSI 73
P L + +G++PSFIWRS+
Sbjct: 594 PSVPFLEAEVGTNPSFIWRSL 614
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 92.8 bits (229), Expect = 4e-17
Identities = 40/87 (45%), Positives = 61/87 (70%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+KIHW + LC K GG+GFR+ FN++LLAKQ+WRL+ P S+V ILKARYF +
Sbjct: 1197 RKIHWLSWNKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVACILKARYFKNC 1256
Query: 126 DVLHSSLGSHPSFIWRSIFKSICVVKR 46
+L + +G PS+IW+S+ K+ ++++
Sbjct: 1257 SILEAQIGHSPSYIWQSLCKARVLIEK 1283
>gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus persica]
Length = 787
Score = 92.4 bits (228), Expect = 5e-17
Identities = 40/87 (45%), Positives = 61/87 (70%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+KIHW + LC K GG+GFR+ FN++LLAKQ+WRL+ P S+V ILKARYF +
Sbjct: 429 RKIHWLSWNKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVARILKARYFKNC 488
Query: 126 DVLHSSLGSHPSFIWRSIFKSICVVKR 46
+L + +G PS+IW+S+ K+ ++++
Sbjct: 489 SILEAQIGHSPSYIWQSLCKARVLIEK 515
>ref|XP_006492487.1| PREDICTED: uncharacterized protein LOC102625512 [Citrus sinensis]
Length = 500
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
K IHW K L ++K GGMGF+DF FN +L+AKQ WR+L P S+V +L+ARYF +
Sbjct: 30 KSIHWSKWEKLSQAKCKGGMGFQDFSSFNQALVAKQGWRILQFPDSLVAKVLQARYFQNK 89
Query: 126 DVLHSSLGSHPSFIWRSI 73
D + + LGS PSF+WRSI
Sbjct: 90 DFMKAKLGSTPSFVWRSI 107
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
K IHW + S LC SK +GG+GFRD FN +LL KQ WRL++ P S+V +LKA+YFP
Sbjct: 1121 KGIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWD 1180
Query: 126 DVLHSSLGSHPSFIWRS 76
D + + LGS PS++WRS
Sbjct: 1181 DFMEAELGSSPSYLWRS 1197
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/91 (48%), Positives = 62/91 (68%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+ I W +C+ K +GG+GFR DFNL+LLAKQ WR L NP S+V I +ARYF ++
Sbjct: 302 RSIRWMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNS 361
Query: 126 DVLHSSLGSHPSFIWRSIFKSICVVKREMGC 34
L++ LGS+PS++WRSI + ++KR GC
Sbjct: 362 SFLNAELGSNPSYMWRSILAAQGLLKR--GC 390
>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
truncatula]
Length = 407
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/87 (44%), Positives = 59/87 (67%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
KK+HW L SK +GG+GF+ DFNL++LAK+V R NP S++ KA Y+PHT
Sbjct: 114 KKMHWVSKKKLFRSKHSGGLGFKTLRDFNLAMLAKKVRRFYTNPNSLIAKCFKANYYPHT 173
Query: 126 DVLHSSLGSHPSFIWRSIFKSICVVKR 46
D+L + +G++PS+ W+SI +I V+ +
Sbjct: 174 DILQAKVGNYPSYAWKSIQNAIWVISK 200
>gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 91.3 bits (225), Expect = 1e-16
Identities = 40/87 (45%), Positives = 60/87 (68%)
Frame = -3
Query: 306 KKIHWYKCSSLCESKLNGGMGFRDFEDFNLSLLAKQVWRLLINPLSIVGLILKARYFPHT 127
+KIHW + LC K GG+GFR+ FN+ LLAKQ+WRL+ P S+V ILKARYF +
Sbjct: 647 RKIHWLSWNKLCLPKQEGGLGFRNLYAFNMVLLAKQLWRLIQTPNSLVARILKARYFKNC 706
Query: 126 DVLHSSLGSHPSFIWRSIFKSICVVKR 46
+L + +G PS+IW+S+ K+ ++++
Sbjct: 707 SILEAQIGHSPSYIWQSLCKARVLIEK 733