BLASTX nr result

ID: Rheum21_contig00019863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00019863
         (268 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310531.2| hypothetical protein POPTR_0007s04490g [Popu...    72   8e-11
ref|XP_002307046.2| hypothetical protein POPTR_0005s06800g [Popu...    68   1e-09

>ref|XP_002310531.2| hypothetical protein POPTR_0007s04490g [Populus trichocarpa]
           gi|550334118|gb|EEE90981.2| hypothetical protein
           POPTR_0007s04490g [Populus trichocarpa]
          Length = 743

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/88 (44%), Positives = 52/88 (59%)
 Frame = +2

Query: 5   QHSDKASNGKNSIVRRLSRWRTQNSAMTIHPDVKHIESSQQDDQPPNLGGENGAIVPVVP 184
           QH++KA   K S+V+ + R  T+NS+  ++PD K   S   +DQ  N   +N AIVPV P
Sbjct: 294 QHTEKAHIKKISVVKWVCRLPTRNSSSVVYPDQKQNTSHVDEDQNSNSERKNYAIVPVGP 353

Query: 185 YASSPPCSPVHGLDVFAEELKSFHAKYS 268
             +  P SP HGL+   EELK  H KYS
Sbjct: 354 EVAWTPISPCHGLNGIPEELKDLHEKYS 381


>ref|XP_002307046.2| hypothetical protein POPTR_0005s06800g [Populus trichocarpa]
           gi|550338282|gb|EEE94042.2| hypothetical protein
           POPTR_0005s06800g [Populus trichocarpa]
          Length = 720

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/88 (44%), Positives = 51/88 (57%)
 Frame = +2

Query: 5   QHSDKASNGKNSIVRRLSRWRTQNSAMTIHPDVKHIESSQQDDQPPNLGGENGAIVPVVP 184
           QHS+KA   + S+V+ + R  T+NS+  +HPD K   S    DQ  NL  EN AIVPV P
Sbjct: 272 QHSEKAHVKRLSVVKWVFRIPTRNSSSVVHPDQKQNISLADADQNSNLEVENYAIVPVGP 331

Query: 185 YASSPPCSPVHGLDVFAEELKSFHAKYS 268
             +  P SP H L+   EELK+   +YS
Sbjct: 332 EVAWTPISPCHDLNGIPEELKNLRERYS 359


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