BLASTX nr result
ID: Rheum21_contig00019812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00019812
(646 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004158102.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-b... 70 5e-10
ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like... 70 5e-10
ref|XP_006359100.1| PREDICTED: DNA damage-binding protein 1-like... 69 9e-10
ref|XP_006359099.1| PREDICTED: DNA damage-binding protein 1-like... 69 9e-10
sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein ... 69 9e-10
ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycope... 69 9e-10
ref|XP_004304711.1| PREDICTED: DNA damage-binding protein 1-like... 69 1e-09
gb|EMJ14913.1| hypothetical protein PRUPE_ppa000579mg [Prunus pe... 69 1e-09
ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus c... 69 1e-09
gb|EPS69820.1| hypothetical protein M569_04940 [Genlisea aurea] 69 2e-09
gb|EXC25620.1| DNA damage-binding protein 1a [Morus notabilis] 68 2e-09
emb|CBI30975.3| unnamed protein product [Vitis vinifera] 68 2e-09
ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isof... 68 2e-09
ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isof... 68 2e-09
ref|XP_006468270.1| PREDICTED: DNA damage-binding protein 1a-lik... 68 3e-09
ref|XP_006448953.1| hypothetical protein CICLE_v10014106mg [Citr... 68 3e-09
gb|EOX96952.1| Damaged DNA binding protein 1A isoform 3 [Theobro... 68 3e-09
gb|EOX96951.1| Damaged DNA binding protein 1A isoform 2 [Theobro... 68 3e-09
gb|EOX96950.1| Damaged DNA binding protein 1A isoform 1 [Theobro... 68 3e-09
ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thal... 67 6e-09
>ref|XP_004158102.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
[Cucumis sativus]
Length = 570
Score = 70.1 bits (170), Expect = 5e-10
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
+LIPV PLCG II+G+ TI YC+ATAF I + P I RAYGRVDADG
Sbjct: 218 VLIPVPPPLCGVIIIGEETIVYCSATAFKAIPVRPSITRAYGRVDADG 265
>ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like [Cucumis sativus]
Length = 1093
Score = 70.1 bits (170), Expect = 5e-10
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
+LIPV PLCG II+G+ TI YC+ATAF I + P I RAYGRVDADG
Sbjct: 218 VLIPVPPPLCGVIIIGEETIVYCSATAFKAIPVRPSITRAYGRVDADG 265
>ref|XP_006359100.1| PREDICTED: DNA damage-binding protein 1-like isoform X2 [Solanum
tuberosum]
Length = 1090
Score = 69.3 bits (168), Expect = 9e-10
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A+AF I I P I RAYGRVDADG
Sbjct: 218 LLIPVPPPLCGVLIIGEETIVYCSASAFKAIPIRPSITRAYGRVDADG 265
>ref|XP_006359099.1| PREDICTED: DNA damage-binding protein 1-like isoform X1 [Solanum
tuberosum]
Length = 1095
Score = 69.3 bits (168), Expect = 9e-10
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A+AF I I P I RAYGRVDADG
Sbjct: 223 LLIPVPPPLCGVLIIGEETIVYCSASAFKAIPIRPSITRAYGRVDADG 270
>sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName:
Full=UV-damaged DNA-binding protein 1
gi|49484911|gb|AAT66742.1| UV-damaged DNA binding
protein 1 [Solanum cheesmaniae]
Length = 1095
Score = 69.3 bits (168), Expect = 9e-10
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A+AF I I P I RAYGRVDADG
Sbjct: 223 LLIPVPPPLCGVLIIGEETIVYCSASAFKAIPIRPSITRAYGRVDADG 270
>ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
gi|350539125|ref|NP_001233864.1| UV damaged DNA binding
protein 1 [Solanum lycopersicum]
gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA
damage-binding protein 1; AltName: Full=High
pigmentation protein 1; AltName: Full=UV-damaged
DNA-binding protein 1 gi|38455768|gb|AAR20885.1| UV
damaged DNA binding protein 1 [Solanum lycopersicum]
gi|42602165|gb|AAS21683.1| UV-damaged DNA binding
protein 1 [Solanum lycopersicum]
Length = 1090
Score = 69.3 bits (168), Expect = 9e-10
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A+AF I I P I RAYGRVDADG
Sbjct: 218 LLIPVPPPLCGVLIIGEETIVYCSASAFKAIPIRPSITRAYGRVDADG 265
>ref|XP_004304711.1| PREDICTED: DNA damage-binding protein 1-like [Fragaria vesca subsp.
vesca]
Length = 1089
Score = 68.9 bits (167), Expect = 1e-09
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A AF I I P I RAYGRVDADG
Sbjct: 218 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITRAYGRVDADG 265
>gb|EMJ14913.1| hypothetical protein PRUPE_ppa000579mg [Prunus persica]
Length = 1089
Score = 68.9 bits (167), Expect = 1e-09
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A AF I I P I RAYGRVDADG
Sbjct: 218 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITRAYGRVDADG 265
>ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
gi|223534048|gb|EEF35767.1| DNA repair protein xp-E,
putative [Ricinus communis]
Length = 1033
Score = 68.9 bits (167), Expect = 1e-09
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A AF I I P I RAYGRVDADG
Sbjct: 163 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITRAYGRVDADG 210
>gb|EPS69820.1| hypothetical protein M569_04940 [Genlisea aurea]
Length = 1091
Score = 68.6 bits (166), Expect = 2e-09
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG II+G+ TI YC+A+ F I I P I RAYGRVDADG
Sbjct: 220 LLIPVPPPLCGVIIIGEETIVYCSASTFKAIPIRPSITRAYGRVDADG 267
>gb|EXC25620.1| DNA damage-binding protein 1a [Morus notabilis]
Length = 976
Score = 68.2 bits (165), Expect = 2e-09
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A AF I I+P I RAYGRVD+DG
Sbjct: 115 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIKPSITRAYGRVDSDG 162
>emb|CBI30975.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 68.2 bits (165), Expect = 2e-09
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A+AF I I P I +AYGRVDADG
Sbjct: 218 LLIPVPPPLCGVLIIGEETIVYCSASAFKAIPIRPSITKAYGRVDADG 265
>ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
Length = 1068
Score = 68.2 bits (165), Expect = 2e-09
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A+AF I I P I +AYGRVDADG
Sbjct: 197 LLIPVPPPLCGVLIIGEETIVYCSASAFKAIPIRPSITKAYGRVDADG 244
>ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
Length = 1089
Score = 68.2 bits (165), Expect = 2e-09
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A+AF I I P I +AYGRVDADG
Sbjct: 218 LLIPVPPPLCGVLIIGEETIVYCSASAFKAIPIRPSITKAYGRVDADG 265
>ref|XP_006468270.1| PREDICTED: DNA damage-binding protein 1a-like [Citrus sinensis]
Length = 1088
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A AF I I P I +AYGRVDADG
Sbjct: 218 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADG 265
>ref|XP_006448953.1| hypothetical protein CICLE_v10014106mg [Citrus clementina]
gi|557551564|gb|ESR62193.1| hypothetical protein
CICLE_v10014106mg [Citrus clementina]
Length = 1088
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A AF I I P I +AYGRVDADG
Sbjct: 218 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADG 265
>gb|EOX96952.1| Damaged DNA binding protein 1A isoform 3 [Theobroma cacao]
Length = 985
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A AF I I P I +AYGRVDADG
Sbjct: 115 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADG 162
>gb|EOX96951.1| Damaged DNA binding protein 1A isoform 2 [Theobroma cacao]
Length = 1040
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A AF I I P I +AYGRVDADG
Sbjct: 170 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADG 217
>gb|EOX96950.1| Damaged DNA binding protein 1A isoform 1 [Theobroma cacao]
Length = 1088
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A AF I I P I +AYGRVDADG
Sbjct: 218 LLIPVPPPLCGVLIIGEETIVYCSANAFKAIPIRPSITKAYGRVDADG 265
>ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA
damage-binding protein 1a; AltName: Full=UV-damaged
DNA-binding protein 1a; Short=DDB1a
gi|7267302|emb|CAB81084.1| UV-damaged DNA binding
factor-like protein [Arabidopsis thaliana]
gi|25054828|gb|AAN71904.1| putative UV-damaged DNA
binding factor [Arabidopsis thaliana]
gi|332657117|gb|AEE82517.1| DNA damage-binding protein
1a [Arabidopsis thaliana]
Length = 1088
Score = 66.6 bits (161), Expect = 6e-09
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = -1
Query: 145 LLIPVTLPLCGFIIVGQYTIAYCTATAFDTIDIEPPIIRAYGRVDADG 2
LLIPV PLCG +I+G+ TI YC+A+AF I I P I +AYGRVD DG
Sbjct: 218 LLIPVPPPLCGVLIIGEETIVYCSASAFKAIPIRPSITKAYGRVDVDG 265