BLASTX nr result
ID: Rheum21_contig00019803
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00019803
(229 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320807.2| arid/bright DNA-binding domain-containing fa... 73 5e-11
ref|XP_002302593.2| hypothetical protein POPTR_0002s16250g [Popu... 68 1e-09
ref|XP_002511884.1| DNA binding protein, putative [Ricinus commu... 66 4e-09
emb|CBI40441.3| unnamed protein product [Vitis vinifera] 65 7e-09
gb|EOX95919.1| ARID/BRIGHT DNA-binding domain,ELM2 domain protei... 65 9e-09
gb|EOX95917.1| ARID/BRIGHT DNA-binding domain,ELM2 domain protei... 65 9e-09
ref|NP_182128.2| ARID/BRIGHT AND ELM2 DNA-binding domain-contain... 64 2e-08
gb|AAC62899.1| hypothetical protein [Arabidopsis thaliana] 64 2e-08
ref|XP_004171008.1| PREDICTED: AT-rich interactive domain-contai... 60 2e-07
ref|XP_004138586.1| PREDICTED: AT-rich interactive domain-contai... 60 2e-07
ref|XP_006397788.1| hypothetical protein EUTSA_v10001382mg [Eutr... 59 7e-07
ref|XP_006358672.1| PREDICTED: AT-rich interactive domain-contai... 59 9e-07
gb|ESW07088.1| hypothetical protein PHAVU_010G100300g [Phaseolus... 58 1e-06
ref|XP_006293914.1| hypothetical protein CARUB_v10022904mg, part... 57 2e-06
ref|XP_006293913.1| hypothetical protein CARUB_v10022904mg [Caps... 57 2e-06
ref|XP_004134323.1| PREDICTED: AT-rich interactive domain-contai... 57 3e-06
gb|ESW11804.1| hypothetical protein PHAVU_008G060800g [Phaseolus... 56 4e-06
ref|XP_006476535.1| PREDICTED: AT-rich interactive domain-contai... 56 6e-06
ref|XP_006476534.1| PREDICTED: AT-rich interactive domain-contai... 56 6e-06
emb|CAN60589.1| hypothetical protein VITISV_023124 [Vitis vinifera] 55 7e-06
>ref|XP_002320807.2| arid/bright DNA-binding domain-containing family protein [Populus
trichocarpa] gi|550323764|gb|EEE99122.2| arid/bright
DNA-binding domain-containing family protein [Populus
trichocarpa]
Length = 426
Score = 72.8 bits (177), Expect = 5e-11
Identities = 45/107 (42%), Positives = 58/107 (54%), Gaps = 31/107 (28%)
Frame = +1
Query: 1 KMHPCMYDDSSVSG----ERVRAKRLL--QPSSLIRNCSSSH------ESTSIFQ----- 129
KMHPCMYDD + S ER++ ++L + SS CS S +S S +
Sbjct: 149 KMHPCMYDDHAGSSYNLRERLKCRKLFPGETSSQALVCSQSSSAATQTDSDSCMEGVYDG 208
Query: 130 --------------KRIPVGQFFQVEVPKWTGVAAESDSKWLGTRIY 228
KRIPVG FQ EVP+WTG+A+ESDSKWLGTR++
Sbjct: 209 DSSTECSVLDLPITKRIPVGPVFQAEVPEWTGMASESDSKWLGTRVW 255
>ref|XP_002302593.2| hypothetical protein POPTR_0002s16250g [Populus trichocarpa]
gi|550345138|gb|EEE81866.2| hypothetical protein
POPTR_0002s16250g [Populus trichocarpa]
Length = 655
Score = 68.2 bits (165), Expect = 1e-09
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 28/104 (26%)
Frame = +1
Query: 1 KMHPCMYDDSSVSG----ERVRAKRLLQP---SSLIRNCS--SSHESTSIFQ-------- 129
KMHPC YDD + S ER++ ++ P SS CS SS E++S
Sbjct: 382 KMHPCRYDDHAGSSYNLRERLKCRKKPLPGGTSSQAHVCSQSSSGETSSCMDGVYDGDSS 441
Query: 130 -----------KRIPVGQFFQVEVPKWTGVAAESDSKWLGTRIY 228
KRIPVG FQ EVP+WTGV ++SDSKWLGT+++
Sbjct: 442 TEHSVLDFPITKRIPVGPVFQAEVPEWTGVVSKSDSKWLGTQVW 485
>ref|XP_002511884.1| DNA binding protein, putative [Ricinus communis]
gi|223549064|gb|EEF50553.1| DNA binding protein,
putative [Ricinus communis]
Length = 279
Score = 66.2 bits (160), Expect = 4e-09
Identities = 42/107 (39%), Positives = 52/107 (48%), Gaps = 32/107 (29%)
Frame = +1
Query: 4 MHPCMYDDSSVS----GERVRAKRLLQ--------------PSSLIRN--------CSSS 105
MHPCMYDD S ER+R + L PSS N CSS
Sbjct: 1 MHPCMYDDHVGSVYNFRERLRCSKGLPSGITLSQAQAYSKLPSSTTENDSNSSTKGCSSD 60
Query: 106 HESTSI------FQKRIPVGQFFQVEVPKWTGVAAESDSKWLGTRIY 228
+ ST +K IP+G FQ E+P+WTGV ESDSKW+G R++
Sbjct: 61 YPSTEYSLLDLPVEKTIPLGPDFQAEIPEWTGVVCESDSKWIGARVW 107
>emb|CBI40441.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKRLLQPSSLIRNCSSSHESTSIFQKRIPVGQFFQVEVPKWT 180
KMHP MY+D + S ER+R + L R+ +S S +KR PVG FQ +P+WT
Sbjct: 347 KMHPSMYEDHAGS-ERLRYSQRLLSGKRSRSRASGLCGDSHVRKR-PVGPAFQATIPEWT 404
Query: 181 GVAAESDSKWLGTRIY 228
GV +E DSKWLGTR++
Sbjct: 405 GVVSEIDSKWLGTRVW 420
>gb|EOX95919.1| ARID/BRIGHT DNA-binding domain,ELM2 domain protein, putative
isoform 3 [Theobroma cacao]
Length = 676
Score = 65.1 bits (157), Expect = 9e-09
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 38/114 (33%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKRLLQPSSLI--------RNCSSSHEST------------- 117
KMHPC+YDD + G +R +RL P L+ +N S S S
Sbjct: 381 KMHPCLYDDPTRFGYNLR-ERLSCPKKLLLGKMVSKGKNYSQSSSSGNHSDLDNSMVGID 439
Query: 118 -------------SIFQ----KRIPVGQFFQVEVPKWTGVAAESDSKWLGTRIY 228
S+F ++P+G +FQVEVP WTG+A+ESD KWLGTR++
Sbjct: 440 KQSHGTYDSATPGSVFDYDNDMQVPIGPYFQVEVPDWTGLASESDPKWLGTRVW 493
>gb|EOX95917.1| ARID/BRIGHT DNA-binding domain,ELM2 domain protein, putative
isoform 1 [Theobroma cacao] gi|508704022|gb|EOX95918.1|
ARID/BRIGHT DNA-binding domain,ELM2 domain protein,
putative isoform 1 [Theobroma cacao]
Length = 671
Score = 65.1 bits (157), Expect = 9e-09
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 38/114 (33%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKRLLQPSSLI--------RNCSSSHEST------------- 117
KMHPC+YDD + G +R +RL P L+ +N S S S
Sbjct: 376 KMHPCLYDDPTRFGYNLR-ERLSCPKKLLLGKMVSKGKNYSQSSSSGNHSDLDNSMVGID 434
Query: 118 -------------SIFQ----KRIPVGQFFQVEVPKWTGVAAESDSKWLGTRIY 228
S+F ++P+G +FQVEVP WTG+A+ESD KWLGTR++
Sbjct: 435 KQSHGTYDSATPGSVFDYDNDMQVPIGPYFQVEVPDWTGLASESDPKWLGTRVW 488
>ref|NP_182128.2| ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein
[Arabidopsis thaliana]
gi|75146722|sp|Q84JT7.1|ARID1_ARATH RecName:
Full=AT-rich interactive domain-containing protein 1;
Short=ARID domain-containing protein 1; AltName:
Full=ARID and ELM2 domain-containing protein 1
gi|28393187|gb|AAO42024.1| unknown protein [Arabidopsis
thaliana] gi|28827512|gb|AAO50600.1| unknown protein
[Arabidopsis thaliana] gi|330255541|gb|AEC10635.1|
ARID/BRIGHT AND ELM2 DNA-binding domain-containing
protein [Arabidopsis thaliana]
Length = 562
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKRLLQPSSLIRNCSSSHESTSIFQKR--IPVGQFFQVEVPK 174
KMHPC+YDDS+ + +R + + + + S +S + R VG FQ +VP+
Sbjct: 313 KMHPCLYDDSAGASYNLRERLSYEDYKRGKTGNGSDIGSSDEEDRPCALVGSKFQAKVPE 372
Query: 175 WTGVAAESDSKWLGTRIY 228
WTG+ ESDSKWLGTRI+
Sbjct: 373 WTGITPESDSKWLGTRIW 390
>gb|AAC62899.1| hypothetical protein [Arabidopsis thaliana]
Length = 576
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKRLLQPSSLIRNCSSSHESTSIFQKR--IPVGQFFQVEVPK 174
KMHPC+YDDS+ + +R + + + + S +S + R VG FQ +VP+
Sbjct: 327 KMHPCLYDDSAGASYNLRERLSYEDYKRGKTGNGSDIGSSDEEDRPCALVGSKFQAKVPE 386
Query: 175 WTGVAAESDSKWLGTRIY 228
WTG+ ESDSKWLGTRI+
Sbjct: 387 WTGITPESDSKWLGTRIW 404
>ref|XP_004171008.1| PREDICTED: AT-rich interactive domain-containing protein 1-like
[Cucumis sativus]
Length = 395
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKRLLQPSSL----IRNCSSSHESTSIFQ-KRIPVGQFFQVE 165
KMHPCMYDD + +R + L L + S S + S+ K +P+G +Q
Sbjct: 148 KMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSLDDYKPVPLGSDYQAR 207
Query: 166 VPKWTGVAAESDSKWLGTR 222
VP+W GV ++SD KWLGT+
Sbjct: 208 VPEWNGVISKSDLKWLGTQ 226
>ref|XP_004138586.1| PREDICTED: AT-rich interactive domain-containing protein 1-like
[Cucumis sativus]
Length = 395
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKRLLQPSSL----IRNCSSSHESTSIFQ-KRIPVGQFFQVE 165
KMHPCMYDD + +R + L L + S S + S+ K +P+G +Q
Sbjct: 148 KMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSLDDYKPVPLGSDYQAR 207
Query: 166 VPKWTGVAAESDSKWLGTR 222
VP+W GV ++SD KWLGT+
Sbjct: 208 VPEWNGVISKSDLKWLGTQ 226
>ref|XP_006397788.1| hypothetical protein EUTSA_v10001382mg [Eutrema salsugineum]
gi|557098861|gb|ESQ39241.1| hypothetical protein
EUTSA_v10001382mg [Eutrema salsugineum]
Length = 555
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKRLLQPSSL-----------IRNCSSSHESTSIFQKRIPVG 147
KMHPC+Y+DS+ +R + S L N S+S+ S + VG
Sbjct: 297 KMHPCLYEDSAGPSYNLRERLNFDGSQLNEKKPGKGKISSENGSASNSSDEEDRPGALVG 356
Query: 148 QFFQVEVPKWTGVAAESDSKWLGTRIY 228
+Q EVP+WT + +ES++KWLGTRI+
Sbjct: 357 SGYQAEVPEWTDIRSESNAKWLGTRIW 383
>ref|XP_006358672.1| PREDICTED: AT-rich interactive domain-containing protein 1-like
[Solanum tuberosum]
Length = 466
Score = 58.5 bits (140), Expect = 9e-07
Identities = 41/103 (39%), Positives = 52/103 (50%), Gaps = 27/103 (26%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKR--LLQPSSLIRNCSSSHESTSI----------------- 123
KMHP MYDD++ S ERVR R LL + L R S+ S+S
Sbjct: 195 KMHPSMYDDNA-SLERVRCSRRVLLAKNPLERTHFSAVSSSSSPSDEDPIDGPADSSEES 253
Query: 124 --------FQKRIPVGQFFQVEVPKWTGVAAESDSKWLGTRIY 228
+KRIPVG FQ ++P+W ESDSKWLGT+I+
Sbjct: 254 GLGLLWNHRRKRIPVGPQFQADIPEWRHEKCESDSKWLGTQIW 296
>gb|ESW07088.1| hypothetical protein PHAVU_010G100300g [Phaseolus vulgaris]
Length = 567
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/108 (35%), Positives = 49/108 (45%), Gaps = 32/108 (29%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVR------AKRLLQPSSLIRNCSSSHESTS-------------I 123
KMHPC+Y+D + +R K L + +R+ S S T +
Sbjct: 282 KMHPCLYEDQVGTNYNLRDRLKCDKKLLFGKYTSVRSSSDSSLETENRTPSPRTEGQSEL 341
Query: 124 FQK-------------RIPVGQFFQVEVPKWTGVAAESDSKWLGTRIY 228
F RIP+G Q E+PKWTGV ESDSKWLGTRI+
Sbjct: 342 FDSSDAHSGLDKWGTVRIPLGANHQAEIPKWTGVTFESDSKWLGTRIW 389
>ref|XP_006293914.1| hypothetical protein CARUB_v10022904mg, partial [Capsella rubella]
gi|482562622|gb|EOA26812.1| hypothetical protein
CARUB_v10022904mg, partial [Capsella rubella]
Length = 572
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKRLL------QPSSLIRNCSSSHESTSIFQKRIPVGQFFQV 162
KMHP +YD+S+ +R + + SS I + S S + + R VG FQ
Sbjct: 327 KMHPSLYDNSAGPSYNLRERTSYDGQFNDKKSSGIGSDSDSSDEED--RPRTLVGSEFQA 384
Query: 163 EVPKWTGVAAESDSKWLGTRIY 228
EVP+WT + ESDSKWLGTRI+
Sbjct: 385 EVPEWTEITPESDSKWLGTRIW 406
>ref|XP_006293913.1| hypothetical protein CARUB_v10022904mg [Capsella rubella]
gi|482562621|gb|EOA26811.1| hypothetical protein
CARUB_v10022904mg [Capsella rubella]
Length = 560
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = +1
Query: 1 KMHPCMYDDSSVSGERVRAKRLL------QPSSLIRNCSSSHESTSIFQKRIPVGQFFQV 162
KMHP +YD+S+ +R + + SS I + S S + + R VG FQ
Sbjct: 315 KMHPSLYDNSAGPSYNLRERTSYDGQFNDKKSSGIGSDSDSSDEED--RPRTLVGSEFQA 372
Query: 163 EVPKWTGVAAESDSKWLGTRIY 228
EVP+WT + ESDSKWLGTRI+
Sbjct: 373 EVPEWTEITPESDSKWLGTRIW 394
>ref|XP_004134323.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Cucumis sativus]
Length = 537
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 26/101 (25%)
Frame = +1
Query: 4 MHPCMYDDSSVSGERVRAKRLLQPSSLIRNCSSSHESTSI-------------------- 123
+HPCM+DD S +R + SS I C S + +
Sbjct: 290 IHPCMFDDHQDSSYNLRKRAR---SSKIFPCGMSRGQSPLRTTEDQLDQKVLVTTYPLMP 346
Query: 124 ------FQKRIPVGQFFQVEVPKWTGVAAESDSKWLGTRIY 228
K+IP+G FQVEVP+W+G+ +ESDSKWLG+ ++
Sbjct: 347 DYMGEFASKQIPIGPKFQVEVPEWSGITSESDSKWLGSLVW 387
>gb|ESW11804.1| hypothetical protein PHAVU_008G060800g [Phaseolus vulgaris]
gi|561012944|gb|ESW11805.1| hypothetical protein
PHAVU_008G060800g [Phaseolus vulgaris]
gi|561012945|gb|ESW11806.1| hypothetical protein
PHAVU_008G060800g [Phaseolus vulgaris]
Length = 624
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +1
Query: 43 ERVRAKRLLQ--PSSLIRNCSSSHESTSIFQKRIPVGQFFQVEVPKWTGVAAESDSKWLG 216
ER R+ R L+ +CS+ + IPVG Q EVPKWTG+ ESDSKWLG
Sbjct: 385 ERTRSARAEDRVDKKLLESCSALSSLDKCARVHIPVGPNHQAEVPKWTGMTCESDSKWLG 444
Query: 217 TRIY 228
T I+
Sbjct: 445 TEIW 448
>ref|XP_006476535.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
isoform X2 [Citrus sinensis]
Length = 590
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +1
Query: 94 CSSSHESTSIFQKRIPVGQFFQVEVPKWTGVAAESDSKWLGTRIY 228
CSS E +K++ VG FQ VP+WTGV ESDSKWLGTRI+
Sbjct: 376 CSSGDEPQ---EKQVSVGPLFQASVPEWTGVVLESDSKWLGTRIW 417
>ref|XP_006476534.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
isoform X1 [Citrus sinensis]
Length = 625
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +1
Query: 94 CSSSHESTSIFQKRIPVGQFFQVEVPKWTGVAAESDSKWLGTRIY 228
CSS E +K++ VG FQ VP+WTGV ESDSKWLGTRI+
Sbjct: 411 CSSGDEPQ---EKQVSVGPLFQASVPEWTGVVLESDSKWLGTRIW 452
>emb|CAN60589.1| hypothetical protein VITISV_023124 [Vitis vinifera]
Length = 258
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +1
Query: 4 MHPCMYDDSSVSGERVRAKRLLQPSSLIRNCSSSHESTSIFQKRIPVGQFFQVEVPKWTG 183
MHP S E+ +P + N +F K IPVG FQ E PKWTG
Sbjct: 12 MHPPXTKSESCPKEQALTPNEQEPENT--NTLDDLFPDDLFLKPIPVGPNFQAEAPKWTG 69
Query: 184 VAAESDSKWLGTRIY 228
ESDSKWLGT+++
Sbjct: 70 EVTESDSKWLGTQVW 84