BLASTX nr result

ID: Rheum21_contig00019764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00019764
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315233.2| hypothetical protein POPTR_0010s21450g [Popu...    59   9e-07
gb|EMJ22486.1| hypothetical protein PRUPE_ppa015315mg [Prunus pe...    58   1e-06
gb|EMJ17309.1| hypothetical protein PRUPE_ppa018725mg [Prunus pe...    58   1e-06
ref|XP_004301822.1| PREDICTED: F-box protein CPR30-like [Fragari...    57   3e-06
ref|XP_004305689.1| PREDICTED: F-box protein CPR30-like [Fragari...    55   1e-05
gb|EMJ11855.1| hypothetical protein PRUPE_ppa021936mg [Prunus pe...    55   1e-05
ref|XP_004237754.1| PREDICTED: F-box/kelch-repeat protein At3g06...    55   1e-05
ref|XP_004237753.1| PREDICTED: F-box/kelch-repeat protein At3g06...    55   1e-05

>ref|XP_002315233.2| hypothetical protein POPTR_0010s21450g [Populus trichocarpa]
           gi|550330305|gb|EEF01404.2| hypothetical protein
           POPTR_0010s21450g [Populus trichocarpa]
          Length = 362

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
 Frame = +3

Query: 3   LWNPSIRMFLTVPIPKYKDSGWKYFEGQDCFGFWIDPSSKEYKFVIVNSILDKKGKPAGS 182
           LWNPSI   L + +P+  D     F G   FGF  +  S +YKFV V +       P G 
Sbjct: 117 LWNPSIGKSLNLVLPRLSDP----FHG--IFGFGFNRQSNDYKFVRVAT----PHYPVGC 166

Query: 183 VVYSSIRQDWRVIP-AVEVGSWMPRPTVM-----------IHGVAHWRGNRSEGDAGIIL 326
            VYS   + W+ I  +  +G   P P+V+           ++GV HW  +R E  +  +L
Sbjct: 167 QVYSVKERSWKAIDVSPALGYINPIPSVLWGRSSSYNYAFLNGVLHWLVDREEFGSRFVL 226

Query: 327 SFDFIHERF-DLIEMPDLKFSLDE 395
           SFD  ++ F  ++  P L   LDE
Sbjct: 227 SFDLRNDSFGKMMLSPYLASKLDE 250


>gb|EMJ22486.1| hypothetical protein PRUPE_ppa015315mg [Prunus persica]
          Length = 411

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
 Frame = +3

Query: 9   NPSIRMFLTVPIPKYKDSGWKYFEGQDCFGFWIDPSSKEYKFVIVNSILDKKGKPAGSVV 188
           NP    FL++P P   D        +DC+GF   P S+ YK V V S   K  +P   +V
Sbjct: 150 NPVTGEFLSLPTPPNPDR-------RDCYGFGFSPISEVYKLVRVLSPYGKPDQPDQVMV 202

Query: 189 YSSIRQDWRVI--PAVEVGSWMPRPTVMIHGVAHWRGNRSEGDAGIILSFDFIHERFDLI 362
            +     WR I  PA       P   + I+G  HW G+ S   + ++ +FD   E+F  +
Sbjct: 203 LTVGSGIWRNIGHPAYSFDGVTPHG-IYINGFIHWIGHSSSDCSRLVCAFDVESEQFQEL 261

Query: 363 EMPDLKFSLDE 395
            +P   + LDE
Sbjct: 262 PLPPCIYDLDE 272


>gb|EMJ17309.1| hypothetical protein PRUPE_ppa018725mg [Prunus persica]
          Length = 383

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
 Frame = +3

Query: 3   LWNPSIRMFLTVPIPKYKDSGWKYFEGQDCFGFWIDPSSKEYKFVIVNSILDKKGKPAGS 182
           LWNPSIR F+T+  P    S          +GF  D    +YK V +  +   +G+    
Sbjct: 124 LWNPSIRKFITLAKPHVPKS-----PHHSVYGFGFDSKKNDYKVVRLVYLRQNEGQACPK 178

Query: 183 V-VYSSIRQDWRVI----PAVEVGSWMPRPTVMIHGVAHWRGNRSEGDA--GIILSFDFI 341
           + +YS     W+ I    P+ ++     R  V ++G  HW  +  +G+    ++LSFD  
Sbjct: 179 IELYSLNSGSWKSITSAAPSYQIAQNF-RAQVFVNGAVHWVASCKKGNCFRNVVLSFDMS 237

Query: 342 HERFDLIEMPD 374
           +E F  IE+P+
Sbjct: 238 NETFQEIELPE 248


>ref|XP_004301822.1| PREDICTED: F-box protein CPR30-like [Fragaria vesca subsp. vesca]
          Length = 390

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
 Frame = +3

Query: 3   LWNPSIRMFLTVPIPKYKDSGWKYFEGQDCFGFWIDPSSKEYKFVIVNSILDKK--GKPA 176
           +WNPSIR  + +P P  K S     +    FGF  D  S +YK + +    D++   K  
Sbjct: 133 IWNPSIRKIVILPRPSIK-SPTICMQTHHAFGFGYDAQSNDYKVLRILKSEDERLVTKLR 191

Query: 177 GSVVYSSIRQDWR-----VIPA-VEVGSWMPRPTVMIHGVAHWRGNR-SEGDAGIILSFD 335
              VYS  R  W+       PA ++   W     V ++   HW   R SE +  II+SFD
Sbjct: 192 EVEVYSLARNTWKRLSCDTFPACLKSVRWCTGKYVFVNNALHWAQYRDSEMEKYIIVSFD 251

Query: 336 FIHERFDLIEMPD 374
              E F  IEMP+
Sbjct: 252 MAGELFSEIEMPE 264


>ref|XP_004305689.1| PREDICTED: F-box protein CPR30-like [Fragaria vesca subsp. vesca]
          Length = 394

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
 Frame = +3

Query: 3   LWNPSIRMFLTVPIPKYKDSGWKYFEGQDCFGFWIDPSSKEYKFVIVNSILDKKGKPAGS 182
           +WNPSIR F+ +P P+  D  ++  E    FGF  D  + +YK + + S LD+   P  +
Sbjct: 143 IWNPSIRRFVFLPRPRVVD--YENVEQFHAFGF--DMPTNDYKVLRIMSYLDRSDVPPNT 198

Query: 183 ----VVYSSIRQDWRVIPAVEVGSWMP-----RPTVMIHGVAHW--RGNRSEGDAGIILS 329
                VYS  R  W+ + AV V          R  V+++G  HW   GN  +     I++
Sbjct: 199 PYEVEVYSLARGSWKSLSAVVVPKDYNHYLEFRDGVLLNGSLHWFQLGNNRD---NFIVT 255

Query: 330 FDFIHERFDLIEMPD 374
           FD  +E F  + +PD
Sbjct: 256 FDMYNEIFCEMVVPD 270


>gb|EMJ11855.1| hypothetical protein PRUPE_ppa021936mg [Prunus persica]
          Length = 391

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
 Frame = +3

Query: 3   LWNPSIRMFLTVPIPKYKDSGWKYFEGQDCFGFWIDPSSKEYKFVIVNSILDKKGKPAGS 182
           +WNP+IR  LT+P P  +    + ++    FGF  D  + +YK V V ++LD++G P  +
Sbjct: 137 IWNPAIRKLLTLPKPNVRFVTHRGYDASIGFGF--DAMTNDYKVVRVVTLLDQRGTPTLA 194

Query: 183 VVYSSIRQDWRVIPAVEVGSWMP--RPTVMIHGVAHWR--GNRSEGDAGIILSFDFIHER 350
            VYS     W  +  V           +  ++G  HW      + G    IL+FD   E 
Sbjct: 195 EVYSLATGKWSSLGCVSPTCLTDGRASSAFVNGFLHWPVFCKTNGGLYYFILTFDLGKEV 254

Query: 351 FDLIEMPDL 377
           F  I MP +
Sbjct: 255 FRKIPMPKI 263


>ref|XP_004237754.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
           lycopersicum]
          Length = 400

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
 Frame = +3

Query: 3   LWNPSIRMFLTVPIPKYKDSGWKYFEGQDCFGFWIDPSSKEYKFVIVNSILDKKG----K 170
           LWNP+ + F ++P   ++  G+        +G   D S+ +YK V +    D  G     
Sbjct: 131 LWNPATKEFRSLPPAPFEIEGFLSHNNDHQYGLGFDMSTLDYKVVWIRVFWDDLGLSDNN 190

Query: 171 PAGSVVYSSIRQDW-RVIPAVEVGSWMPRP--TVMIHGVAHWRGNRSEGDAGIILSFDFI 341
              + VYSS    W R+ P     S +  P     ++GV +W     +G   +ILSFD +
Sbjct: 191 RVYTCVYSSCNNSWRRLTPKFPPSSILSAPLDATYLNGVYYWLSRGLDG-IFMILSFDMV 249

Query: 342 HERFDLIEMPDL 377
            E+F  +++PD+
Sbjct: 250 CEQFGEMQVPDI 261


>ref|XP_004237753.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
           lycopersicum]
          Length = 398

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
 Frame = +3

Query: 3   LWNPSIRMFLTVPIPKYKDSGWKYFEGQDCFGFWIDPSSKEYKFVIVNSILDKKGKPAGS 182
           LWNP+ + F ++P   ++  G+        +GF  D  + +YK V +    D  G    +
Sbjct: 131 LWNPATKEFRSLPPAHFEIEGFWSHNNDHQYGFGFDLVTLDYKVVWIRVFWDDLGLSVYT 190

Query: 183 VVYSSIRQDWRVI----PAVEVGSWMPRPTVMIHGVAHWRGNRSEGDAGI--ILSFDFIH 344
            VYSS    W+ +    P +   S  P     ++GV +W    S+G  GI  ILS D I 
Sbjct: 191 CVYSSCNNSWKRLTLEFPPISNLS-APLDATYLNGVYYW---LSKGLNGIYTILSLDMIS 246

Query: 345 ERFDLIEMPDL 377
           E+F  +++PD+
Sbjct: 247 EQFREMQVPDI 257


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