BLASTX nr result
ID: Rheum21_contig00018973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00018973
(267 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC33548.1| putative mitochondrial protein [Morus notabilis] 47 7e-15
ref|XP_006857105.1| hypothetical protein AMTR_s00065p00126250 [A... 36 5e-09
ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabac... 64 3e-08
ref|YP_004222360.1| hypothetical protein BevumaM_p127 [Beta vulg... 64 3e-08
ref|XP_003588285.1| NADH-ubiquinone oxidoreductase chain [Medica... 60 2e-07
ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin... 59 7e-07
ref|XP_004153322.1| PREDICTED: NADH-ubiquinone oxidoreductase ch... 59 7e-07
ref|XP_006364254.1| PREDICTED: NADH-ubiquinone oxidoreductase ch... 58 1e-06
>gb|EXC33548.1| putative mitochondrial protein [Morus notabilis]
Length = 478
Score = 47.0 bits (110), Expect(3) = 7e-15
Identities = 21/26 (80%), Positives = 21/26 (80%), Gaps = 3/26 (11%)
Frame = +1
Query: 1 RPRWSWEPTYTFL---RPQHLNKERA 69
RPRWSWEPTYTFL PQHLNK RA
Sbjct: 304 RPRWSWEPTYTFLGLALPQHLNKRRA 329
Score = 46.6 bits (109), Expect(3) = 7e-15
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +3
Query: 198 GSASESTDEPHAGKLARVVLAGD 266
GSASESTDEPHAGKLARVVLAG+
Sbjct: 344 GSASESTDEPHAGKLARVVLAGN 366
Score = 32.0 bits (71), Expect(3) = 7e-15
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 56 IKKGRAPKRKQPSLFKKA 109
+ K RAPKR QPSLFKKA
Sbjct: 324 LNKRRAPKRNQPSLFKKA 341
>ref|XP_006857105.1| hypothetical protein AMTR_s00065p00126250 [Amborella trichopoda]
gi|548861188|gb|ERN18572.1| hypothetical protein
AMTR_s00065p00126250 [Amborella trichopoda]
Length = 90
Score = 36.2 bits (82), Expect(3) = 5e-09
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1
Query: 139 DNALNTKVCSSALLSHAESQAAPRK 213
+NALNT V SSA SHAES AAPRK
Sbjct: 42 NNALNTFVFSSAPFSHAESLAAPRK 66
Score = 35.4 bits (80), Expect(3) = 5e-09
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 213 STDEPHAGKLARVVLAGD 266
S DEPHAGKLARVVL GD
Sbjct: 68 SMDEPHAGKLARVVLIGD 85
Score = 33.9 bits (76), Expect(3) = 5e-09
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2
Query: 47 NI*IKKGRAPKRKQPSLFKKA 109
NI I+ RAPKR QPSLFKKA
Sbjct: 14 NIYIRGSRAPKRNQPSLFKKA 34
>ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabacum]
gi|56806565|dbj|BAD83466.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 142
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +2
Query: 185 MLSHRQRLGKHGRATCRETCTCGSGRG 265
MLSHRQRLGKHGRATCRETCTCGSGRG
Sbjct: 1 MLSHRQRLGKHGRATCRETCTCGSGRG 27
>ref|YP_004222360.1| hypothetical protein BevumaM_p127 [Beta vulgaris subsp. maritima]
gi|346683233|ref|YP_004842165.1| hypothetical protein
BemaM_p121 [Beta macrocarpa]
gi|317905592|emb|CBX33215.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439875|emb|CBX33310.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|320148029|emb|CBJ20693.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500151|emb|CBX24970.1|
hypothetical protein [Beta macrocarpa]
gi|384977923|emb|CBL54147.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 133
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +2
Query: 185 MLSHRQRLGKHGRATCRETCTCGSGRG 265
MLSHRQRLGKHGRATCRETCTCGSGRG
Sbjct: 1 MLSHRQRLGKHGRATCRETCTCGSGRG 27
>ref|XP_003588285.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477333|gb|AES58536.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
gi|442803233|gb|AGC78968.1| hypothetical protein
(mitochondrion) [Vicia faba] gi|442803260|gb|AGC78995.1|
hypothetical protein (mitochondrion) [Vicia faba]
Length = 128
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 185 MLSHRQRLGKHGRATCRETCTCGSGRG 265
MLSHRQRLGK GRATCRETCTCGSGRG
Sbjct: 1 MLSHRQRLGKRGRATCRETCTCGSGRG 27
>ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
chain 1-like [Cucumis sativus]
Length = 166
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/28 (96%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
Frame = +2
Query: 185 MLSH-RQRLGKHGRATCRETCTCGSGRG 265
MLSH RQRLGKHGRATCRETCTCGSGRG
Sbjct: 1 MLSHSRQRLGKHGRATCRETCTCGSGRG 28
>ref|XP_004153322.1| PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like, partial
[Cucumis sativus] gi|449472154|ref|XP_004153510.1|
PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like,
partial [Cucumis sativus]
gi|449473509|ref|XP_004153902.1| PREDICTED:
NADH-ubiquinone oxidoreductase chain 1-like, partial
[Cucumis sativus] gi|449529808|ref|XP_004171890.1|
PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like,
partial [Cucumis sativus]
Length = 135
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/28 (96%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
Frame = +2
Query: 185 MLSH-RQRLGKHGRATCRETCTCGSGRG 265
MLSH RQRLGKHGRATCRETCTCGSGRG
Sbjct: 1 MLSHSRQRLGKHGRATCRETCTCGSGRG 28
>ref|XP_006364254.1| PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like [Solanum
tuberosum]
Length = 137
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +2
Query: 185 MLSHRQRLGKHGRATCRETCTCGSGRG 265
MLSHRQ LGKHGRATCRETC CGSGRG
Sbjct: 1 MLSHRQCLGKHGRATCRETCRCGSGRG 27