BLASTX nr result

ID: Rheum21_contig00018906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00018906
         (431 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006476403.1| PREDICTED: nucleoporin seh1-like [Citrus sin...   133   2e-29
ref|XP_006439380.1| hypothetical protein CICLE_v10021146mg [Citr...   129   3e-28
ref|XP_002303639.1| seh1 family protein [Populus trichocarpa] gi...   124   1e-26
gb|EMJ10552.1| hypothetical protein PRUPE_ppa008587mg [Prunus pe...   123   2e-26
ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vini...   123   2e-26
emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera]   123   3e-26
dbj|BAO49748.1| nuclear pore complex protein Seh1a [Nicotiana be...   117   2e-24
dbj|BAO49749.1| nuclear pore complex protein Seh1b [Nicotiana be...   114   1e-23
ref|XP_002509937.1| nucleotide binding protein, putative [Ricinu...   114   1e-23
ref|XP_006343876.1| PREDICTED: nucleoporin seh1-A-like [Solanum ...   110   3e-22
gb|EOY24974.1| Hydroquinone glucosyltransferase, putative [Theob...   109   3e-22
ref|XP_006847331.1| hypothetical protein AMTR_s00015p00235230 [A...   107   1e-21
gb|AFK36046.1| unknown [Lotus japonicus]                              107   2e-21
gb|AFK35179.1| unknown [Lotus japonicus]                              107   2e-21
dbj|BAJ10726.1| WD40 repeat nucleoporin similar to SEH1 [Lotus j...   105   8e-21
gb|EXC02929.1| Nucleoporin seh1 [Morus notabilis]                     104   1e-20
ref|XP_006573804.1| PREDICTED: nucleoporin seh1-A-like isoform X...   104   1e-20
ref|XP_004298888.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin ...   104   1e-20
ref|XP_003517499.1| PREDICTED: nucleoporin seh1-A-like isoform X...   104   1e-20
ref|XP_004245531.1| PREDICTED: nucleoporin seh1-like [Solanum ly...   103   3e-20

>ref|XP_006476403.1| PREDICTED: nucleoporin seh1-like [Citrus sinensis]
          Length = 325

 Score =  133 bits (335), Expect = 2e-29
 Identities = 58/76 (76%), Positives = 68/76 (89%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           M+K VATLDKGT CSSWNYCGQR+ATG+ DGTL+IFDSPDP+SSSF C  ++KVH GA+L
Sbjct: 1   MDKAVATLDKGTTCSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAIL 60

Query: 379 KVLWAPPEYGDAVACI 426
           KV+W PPE+GDAVACI
Sbjct: 61  KVVWVPPEFGDAVACI 76


>ref|XP_006439380.1| hypothetical protein CICLE_v10021146mg [Citrus clementina]
           gi|557541642|gb|ESR52620.1| hypothetical protein
           CICLE_v10021146mg [Citrus clementina]
          Length = 325

 Score =  129 bits (325), Expect = 3e-28
 Identities = 57/76 (75%), Positives = 67/76 (88%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           M+K VATLDKGT  SSWNYCGQR+ATG+ DGTL+IFDSPDP+SSSF C  ++KVH GA+L
Sbjct: 1   MDKAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAIL 60

Query: 379 KVLWAPPEYGDAVACI 426
           KV+W PPE+GDAVACI
Sbjct: 61  KVVWVPPEFGDAVACI 76


>ref|XP_002303639.1| seh1 family protein [Populus trichocarpa]
           gi|118483516|gb|ABK93656.1| unknown [Populus
           trichocarpa] gi|222841071|gb|EEE78618.1| seh1 family
           protein [Populus trichocarpa]
          Length = 325

 Score =  124 bits (311), Expect = 1e-26
 Identities = 53/76 (69%), Positives = 65/76 (85%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           MEK VATLDKGT C+SWNYCGQR+ATG+ +G L+IFDSPDPASSSF  T   ++H+G ++
Sbjct: 1   MEKSVATLDKGTTCTSWNYCGQRLATGSFNGFLSIFDSPDPASSSFTATSNIRIHEGGIV 60

Query: 379 KVLWAPPEYGDAVACI 426
           K++W PPEYGDAVACI
Sbjct: 61  KIVWIPPEYGDAVACI 76


>gb|EMJ10552.1| hypothetical protein PRUPE_ppa008587mg [Prunus persica]
          Length = 326

 Score =  123 bits (309), Expect = 2e-26
 Identities = 54/77 (70%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGA-V 375
           MEKP+  LDKGT CSSWNY  QR+ATG++DGTLAIFD+ DPASSSF CT +SKVH+ A +
Sbjct: 1   MEKPLVALDKGTTCSSWNYSSQRLATGSVDGTLAIFDTRDPASSSFSCTSKSKVHEAAGI 60

Query: 376 LKVLWAPPEYGDAVACI 426
           +K++W PPEYGDAVAC+
Sbjct: 61  VKIVWVPPEYGDAVACV 77


>ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vinifera]
           gi|297742315|emb|CBI34464.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score =  123 bits (309), Expect = 2e-26
 Identities = 55/76 (72%), Positives = 65/76 (85%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           MEK + TLD GT CSSWNY G+R+ATG++DGTLAIFDS DPASSSF CT RS+VH+ +V+
Sbjct: 1   MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSSFTCTSRSRVHEDSVV 60

Query: 379 KVLWAPPEYGDAVACI 426
           KV+W PPEYGDAV CI
Sbjct: 61  KVVWVPPEYGDAVGCI 76


>emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera]
          Length = 325

 Score =  123 bits (308), Expect = 3e-26
 Identities = 54/76 (71%), Positives = 65/76 (85%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           MEK + TLD GT CSSWNY G+R+ATG++DGTLAIFDS DPASSSF CT RS+VH+ +++
Sbjct: 1   MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSSFTCTSRSRVHEDSIV 60

Query: 379 KVLWAPPEYGDAVACI 426
           KV+W PPEYGDAV CI
Sbjct: 61  KVVWVPPEYGDAVGCI 76


>dbj|BAO49748.1| nuclear pore complex protein Seh1a [Nicotiana benthamiana]
          Length = 325

 Score =  117 bits (293), Expect = 2e-24
 Identities = 48/76 (63%), Positives = 63/76 (82%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           M+KP+  LDKGT C++WNY GQR+A G+ DG L+IFDS DPASS F C+ + KVH+ +++
Sbjct: 1   MDKPIINLDKGTTCTAWNYSGQRLAAGSTDGNLSIFDSTDPASSVFSCSSKFKVHESSIV 60

Query: 379 KVLWAPPEYGDAVACI 426
           K++WAPPEYGDAVACI
Sbjct: 61  KIIWAPPEYGDAVACI 76


>dbj|BAO49749.1| nuclear pore complex protein Seh1b [Nicotiana benthamiana]
          Length = 360

 Score =  114 bits (286), Expect = 1e-23
 Identities = 47/76 (61%), Positives = 62/76 (81%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           M+KP+  L+KGT C++WNY GQR+A G  DG L+IFDS DPASS F C+ + KVH+ +++
Sbjct: 1   MDKPIINLEKGTTCTAWNYSGQRLAAGFTDGNLSIFDSTDPASSVFSCSSKFKVHESSIV 60

Query: 379 KVLWAPPEYGDAVACI 426
           K++WAPPEYGDAVACI
Sbjct: 61  KIIWAPPEYGDAVACI 76


>ref|XP_002509937.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223549836|gb|EEF51324.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 340

 Score =  114 bits (285), Expect = 1e-23
 Identities = 51/76 (67%), Positives = 61/76 (80%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           MEK +ATLD GT CSSWNYCGQR+ATG+IDG L+IFD  DP SSSF  T + +VHD  ++
Sbjct: 18  MEKAIATLDTGTTCSSWNYCGQRLATGSIDGYLSIFDPRDPGSSSFTRTSKIRVHDAGIV 77

Query: 379 KVLWAPPEYGDAVACI 426
           KV+W  PE+GDAVACI
Sbjct: 78  KVVWVSPEHGDAVACI 93


>ref|XP_006343876.1| PREDICTED: nucleoporin seh1-A-like [Solanum tuberosum]
          Length = 325

 Score =  110 bits (274), Expect = 3e-22
 Identities = 45/76 (59%), Positives = 61/76 (80%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           M+K +  LD+GT C++WNY G R+A G+ DGTL++FDS DPASS F C+ + KVH+ +++
Sbjct: 1   MDKAIIKLDEGTTCTAWNYSGHRLAAGSTDGTLSLFDSTDPASSVFNCSSKFKVHESSIV 60

Query: 379 KVLWAPPEYGDAVACI 426
           KV+WAPPEYGD VACI
Sbjct: 61  KVVWAPPEYGDVVACI 76


>gb|EOY24974.1| Hydroquinone glucosyltransferase, putative [Theobroma cacao]
          Length = 816

 Score =  109 bits (273), Expect = 3e-22
 Identities = 45/77 (58%), Positives = 63/77 (81%)
 Frame = +1

Query: 196 EMEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAV 375
           +MEKP+A L++GT CS+WNYCG+R+A G++DG+L+I DS D +SSSF C+ + K ++  +
Sbjct: 453 DMEKPLAILERGTTCSAWNYCGERLAAGSVDGSLSILDSRDSSSSSFICSSKFKANEAGI 512

Query: 376 LKVLWAPPEYGDAVACI 426
           +KV W PPEYGDAVACI
Sbjct: 513 VKVAWIPPEYGDAVACI 529


>ref|XP_006847331.1| hypothetical protein AMTR_s00015p00235230 [Amborella trichopoda]
           gi|548850408|gb|ERN08912.1| hypothetical protein
           AMTR_s00015p00235230 [Amborella trichopoda]
          Length = 141

 Score =  107 bits (268), Expect = 1e-21
 Identities = 45/75 (60%), Positives = 57/75 (76%)
 Frame = +1

Query: 202 EKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVLK 381
           EK + T++KG  CSSWNY GQRMA G+ DGTL+I+DS DP S+SF CT + K H G + K
Sbjct: 3   EKLLVTMEKGAHCSSWNYSGQRMAVGSTDGTLSIYDSDDPTSTSFSCTSQWKAHVGVICK 62

Query: 382 VLWAPPEYGDAVACI 426
           ++W PPEYGD +ACI
Sbjct: 63  IVWVPPEYGDGIACI 77


>gb|AFK36046.1| unknown [Lotus japonicus]
          Length = 326

 Score =  107 bits (266), Expect = 2e-21
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPD-PASSSFGCTFRSKVHDGAV 375
           M K V TLD GT CSSWNY G R+A G+ DGTL+IFDS D P+SSS   +F+SKVH+G +
Sbjct: 1   MAKEVLTLDNGTTCSSWNYSGTRLAAGSADGTLSIFDSRDPPSSSSLRLSFKSKVHEGNI 60

Query: 376 LKVLWAPPEYGDAVACI 426
           +K++W PP YGDAVACI
Sbjct: 61  VKIVWVPPAYGDAVACI 77


>gb|AFK35179.1| unknown [Lotus japonicus]
          Length = 213

 Score =  107 bits (266), Expect = 2e-21
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPD-PASSSFGCTFRSKVHDGAV 375
           M K V TLD GT CSSWNY G R+A G+ DGTL+IFDS D P+SSS   +F+SKVH+G +
Sbjct: 1   MAKEVLTLDNGTTCSSWNYSGTRLAAGSADGTLSIFDSRDPPSSSSLRLSFKSKVHEGNI 60

Query: 376 LKVLWAPPEYGDAVACI 426
           +K++W PP YGDAVACI
Sbjct: 61  VKIVWVPPAYGDAVACI 77


>dbj|BAJ10726.1| WD40 repeat nucleoporin similar to SEH1 [Lotus japonicus]
          Length = 326

 Score =  105 bits (261), Expect = 8e-21
 Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPD-PASSSFGCTFRSKVHDGAV 375
           M K V TLD GT CSSWNY G R+A G+ DGTL+IFDS D P+SSS   +F+SKVH+G +
Sbjct: 1   MAKEVLTLDNGTTCSSWNYSGTRLAAGSADGTLSIFDSRDPPSSSSLRLSFKSKVHEGNI 60

Query: 376 LKVLWAPPEYGDAVACI 426
           + ++W PP YGDAVACI
Sbjct: 61  VNIVWVPPAYGDAVACI 77


>gb|EXC02929.1| Nucleoporin seh1 [Morus notabilis]
          Length = 323

 Score =  104 bits (259), Expect = 1e-20
 Identities = 46/76 (60%), Positives = 59/76 (77%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           MEK +  L+ GT CSSWNY GQR+A G+ DG L+IFD+ D ASSSF  + +S+VHD  ++
Sbjct: 1   MEKSLVDLENGTTCSSWNYSGQRLAAGSADGFLSIFDARDSASSSFTRSSKSRVHDTGIV 60

Query: 379 KVLWAPPEYGDAVACI 426
           KV+W PPEYGDAVAC+
Sbjct: 61  KVVWIPPEYGDAVACV 76


>ref|XP_006573804.1| PREDICTED: nucleoporin seh1-A-like isoform X2 [Glycine max]
          Length = 291

 Score =  104 bits (259), Expect = 1e-20
 Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPD-PASSSFGCTFRSKVHDGAV 375
           M K + TLD GT C+SWNY G R+A G++DGTL+IFDS D P+SSS   TF+S+V +G +
Sbjct: 1   MAKELLTLDNGTTCTSWNYSGTRLAAGSVDGTLSIFDSRDPPSSSSLHSTFKSRVLEGNI 60

Query: 376 LKVLWAPPEYGDAVACI 426
           +K++W PPEYGDAVACI
Sbjct: 61  VKIVWIPPEYGDAVACI 77


>ref|XP_004298888.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin seh1-like [Fragaria
           vesca subsp. vesca]
          Length = 306

 Score =  104 bits (259), Expect = 1e-20
 Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGA-V 375
           MEK + TL+KGT CSSWNY GQR+ATG++DGTL IFDSP  +SSSF  + + KVH  + V
Sbjct: 1   MEKSLVTLEKGTTCSSWNYSGQRLATGSLDGTLTIFDSPTXSSSSFSSSSKLKVHHASGV 60

Query: 376 LKVLWAPPEYGDAVACI 426
           +KV+W PP++G AVAC+
Sbjct: 61  VKVVWVPPQFGHAVACV 77


>ref|XP_003517499.1| PREDICTED: nucleoporin seh1-A-like isoform X1 [Glycine max]
          Length = 326

 Score =  104 bits (259), Expect = 1e-20
 Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPD-PASSSFGCTFRSKVHDGAV 375
           M K + TLD GT C+SWNY G R+A G++DGTL+IFDS D P+SSS   TF+S+V +G +
Sbjct: 1   MAKELLTLDNGTTCTSWNYSGTRLAAGSVDGTLSIFDSRDPPSSSSLHSTFKSRVLEGNI 60

Query: 376 LKVLWAPPEYGDAVACI 426
           +K++W PPEYGDAVACI
Sbjct: 61  VKIVWIPPEYGDAVACI 77


>ref|XP_004245531.1| PREDICTED: nucleoporin seh1-like [Solanum lycopersicum]
          Length = 325

 Score =  103 bits (256), Expect = 3e-20
 Identities = 43/76 (56%), Positives = 59/76 (77%)
 Frame = +1

Query: 199 MEKPVATLDKGTICSSWNYCGQRMATGAIDGTLAIFDSPDPASSSFGCTFRSKVHDGAVL 378
           M+K +  L++GT C++WNY G R+A G+ DGTL +FDS DPASS F  + + KVH+ +++
Sbjct: 1   MDKAIIKLEEGTTCTAWNYSGHRLAAGSTDGTLFVFDSTDPASSVFSGSSKFKVHESSIV 60

Query: 379 KVLWAPPEYGDAVACI 426
           KV+WAPPEYGD VACI
Sbjct: 61  KVVWAPPEYGDVVACI 76