BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00018853
         (573 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY28515.1| Tetratricopeptide repeat (TPR)-like superfamily p...   162   7e-38
ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi...   159   4e-37
emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]   159   4e-37
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   158   1e-36
ref|XP_006449157.1| hypothetical protein CICLE_v10015628mg [Citr...   157   2e-36
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi...   157   2e-36
ref|XP_006467942.1| PREDICTED: pentatricopeptide repeat-containi...   156   3e-36
gb|EXB75244.1| hypothetical protein L484_026026 [Morus notabilis]     155   9e-36
ref|XP_004234466.1| PREDICTED: pentatricopeptide repeat-containi...   155   9e-36
emb|CBI41008.3| unnamed protein product [Vitis vinifera]              154   2e-35
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   153   3e-35
ref|XP_006343276.1| PREDICTED: pentatricopeptide repeat-containi...   153   3e-35
ref|XP_004293582.1| PREDICTED: pentatricopeptide repeat-containi...   151   1e-34
gb|EOY28516.1| Pentatricopeptide repeat-containing protein, puta...   150   3e-34
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   150   3e-34
ref|XP_002518586.1| pentatricopeptide repeat-containing protein,...   147   1e-33
ref|XP_004504952.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|NP_175985.1| pentatricopeptide repeat-containing protein [Ar...   144   1e-32
ref|XP_002891858.1| pentatricopeptide repeat-containing protein ...   144   2e-32

>gb|EOY28515.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 374

 Score =  162 bits (409), Expect = 7e-38
 Identities = 85/190 (44%), Positives = 126/190 (66%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           KG+K +L+TFN+LL G ++   + +GE++W  MLE   ++ P+IRSYNAKL G++    +
Sbjct: 187 KGVKSDLITFNTLLNGLFKNGKFVDGEKIWGKMLEN--NVEPDIRSYNAKLLGLVTEKRM 244

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
            +AV   EE+R KG+ P+  T+NH+I+G+ ++  LEEAK WY  +  S   P+  TF  L
Sbjct: 245 EEAVKFVEEMRSKGVKPDVFTFNHMIRGYVNEVKLEEAKGWYGQMGKSDCAPDKLTFTML 304

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCF 543
           V  LCE GD G A+++ K +  R  LV   LLQ+VVD L+K  K+++AK LVKL ++N F
Sbjct: 305 VPFLCEKGDLGFAMEVCKEIFLRKRLVGDALLQLVVDELVKASKIEDAKELVKLGKANNF 364

Query: 544 YQYNLVMPSE 573
            +Y L MP+E
Sbjct: 365 CRYKLNMPTE 374


>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13150-like [Vitis vinifera]
          Length = 379

 Score =  159 bits (403), Expect = 4e-37
 Identities = 79/189 (41%), Positives = 127/189 (67%)
 Frame = +1

Query: 7   GLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGMLF 186
           GL+P+L+TFN+LL   Y+   Y++GE++W  M  K  ++ PN+RSYNAKL+G+I+   + 
Sbjct: 193 GLEPDLITFNTLLNAFYQNGSYADGEKIWDLM--KKNNVAPNVRSYNAKLRGVISENRMS 250

Query: 187 DAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHALV 366
           +AV+L +E++  G+ P+  T N L+KGFC+ G+LEEAK+WY  +  + L P   T+  L+
Sbjct: 251 EAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLI 310

Query: 367 RLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCFY 546
             L E GD  +A +L K +  R +L++P LLQ V++ L+K+ K++EA  LV+LA+   F 
Sbjct: 311 PFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELAKLKKF- 369

Query: 547 QYNLVMPSE 573
           +  L +PS+
Sbjct: 370 RITLELPSD 378


>emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
          Length = 340

 Score =  159 bits (403), Expect = 4e-37
 Identities = 79/189 (41%), Positives = 127/189 (67%)
 Frame = +1

Query: 7   GLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGMLF 186
           GL+P+L+TFN+LL   Y+   Y++GE++W  M  K  ++ PN+RSYNAKL+G+I+   + 
Sbjct: 154 GLEPDLITFNTLLNAFYQNGSYADGEKIWDLM--KKNNVAPNVRSYNAKLRGVISENRMS 211

Query: 187 DAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHALV 366
           +AV+L +E++  G+ P+  T N L+KGFC+ G+LEEAK+WY  +  + L P   T+  L+
Sbjct: 212 EAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLI 271

Query: 367 RLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCFY 546
             L E GD  +A +L K +  R +L++P LLQ V++ L+K+ K++EA  LV+LA+   F 
Sbjct: 272 PFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELAKLKKF- 330

Query: 547 QYNLVMPSE 573
           +  L +PS+
Sbjct: 331 RITLELPSD 339


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  158 bits (399), Expect = 1e-36
 Identities = 81/190 (42%), Positives = 122/190 (64%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           K L+P+L+TFN+LL G Y    + +GE++W  M +K  +++P+IRSYNAKL G+++   +
Sbjct: 194 KSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKK--NILPDIRSYNAKLVGLVSEKRM 251

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
            + + L EE++ KG+ P+  ++N LIKGFC+ G ++EA  WY  + ++   P+  TF  L
Sbjct: 252 LEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCLPDKLTFATL 311

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCF 543
           V L CE G    A +L K +  R  LVD  LLQ  VD L+K  KV EAK LV+L  SN +
Sbjct: 312 VPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQLGNSNSY 371

Query: 544 YQYNLVMPSE 573
            +YNL +P++
Sbjct: 372 RRYNLKIPTD 381


>ref|XP_006449157.1| hypothetical protein CICLE_v10015628mg [Citrus clementina]
           gi|557551768|gb|ESR62397.1| hypothetical protein
           CICLE_v10015628mg [Citrus clementina]
          Length = 377

 Score =  157 bits (397), Expect = 2e-36
 Identities = 83/190 (43%), Positives = 122/190 (64%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           KG++P+L+TFN+LL+G Y    +++ E++W  M+    ++ PN+RSYNA+L G+      
Sbjct: 192 KGIRPDLITFNTLLLGFYSNGRFADAEKIWETMVNM--NVRPNVRSYNARLDGLAIEKQT 249

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
             A++L  E+R K +NP+  T+  LIKGF ++G+LEEAK+WY     SG   N   F  L
Sbjct: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCF 543
           V  +CE GD   A +L KR   +  LVD   LQ+VVD L K+L+V+EAK LV+L ++N +
Sbjct: 307 VPFVCEKGDLDFAFNLCKRTFSKRCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366

Query: 544 YQYNLVMPSE 573
            +YNL  PSE
Sbjct: 367 CRYNLKFPSE 376



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 40/169 (23%), Positives = 82/169 (48%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           +  +  +++FN+LL      K + E + ++  +  K G + P++ SYN  ++  +  G L
Sbjct: 121 RNCEQTVLSFNALLGACVNSKKFGEVDGLFKDLPHKLG-IEPDLVSYNTIIKAFVYKGSL 179

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
             A  L  E+  KG+ P+  T+N L+ GF   G   +A+K +  +++  + PN  +++A 
Sbjct: 180 DSANTLLYEMEKKGIRPDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAK 510
           +  L     +  AL+L   M  +    D      ++   + +  ++EAK
Sbjct: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288


>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Vitis vinifera]
          Length = 379

 Score =  157 bits (397), Expect = 2e-36
 Identities = 78/189 (41%), Positives = 126/189 (66%)
 Frame = +1

Query: 7   GLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGMLF 186
           GL+P+L+TFN+LL   Y+   Y++GE++W  M  K  ++ PN+RSYNAKL+G+I+   + 
Sbjct: 193 GLEPDLITFNTLLNAFYQNGSYADGEKIWDLM--KKNNVAPNVRSYNAKLRGVISENRMS 250

Query: 187 DAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHALV 366
           +AV+L +E++  G+ P+  T N L+KGFC+ G+LEEAK+WY  +  + L P   T+  L+
Sbjct: 251 EAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLI 310

Query: 367 RLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCFY 546
             L E GD  +A +L K +  R +L++P LLQ V++ L+K+ K++EA  LV+L +   F 
Sbjct: 311 PFLVEKGDFEMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELEKLKKF- 369

Query: 547 QYNLVMPSE 573
           +  L +PS+
Sbjct: 370 RITLELPSD 378


>ref|XP_006467942.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Citrus sinensis]
          Length = 377

 Score =  156 bits (395), Expect = 3e-36
 Identities = 83/190 (43%), Positives = 121/190 (63%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           KG++P+L+TFN+LL+G Y    +++ E++W  M+    ++ PN+RSYNA+L G+      
Sbjct: 192 KGIRPDLITFNTLLLGFYSNGRFADAEKIWETMVNM--NVRPNVRSYNARLDGLAIEKQT 249

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
             A++L  E+R K +NP+  T+  LIKGF ++G+LEEAK+WY     SG   N   F  L
Sbjct: 250 KKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAKRWYNK---SGCGMNKAIFKLL 306

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCF 543
           V  +CE GD   A +L KR      LVD   LQ+VVD L K+L+V+EAK LV+L ++N +
Sbjct: 307 VPFVCEKGDLDFAFNLCKRTFSERCLVDQAPLQLVVDRLAKELRVEEAKELVELGKTNSY 366

Query: 544 YQYNLVMPSE 573
            +YNL  PSE
Sbjct: 367 CRYNLKFPSE 376



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 40/169 (23%), Positives = 83/169 (49%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           +  +  +++FN+LL      K + E + ++  +  K G + P++ SYN  ++  ++ G L
Sbjct: 121 RNCEQTVLSFNALLGACVNSKKFDEVDGLFKDLPHKLG-IEPDLVSYNTIIKAFVDKGSL 179

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
             A  L  E+  KG+ P+  T+N L+ GF   G   +A+K +  +++  + PN  +++A 
Sbjct: 180 DSANTLLYEMEKKGIRPDLITFNTLLLGFYSNGRFADAEKIWETMVNMNVRPNVRSYNAR 239

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAK 510
           +  L     +  AL+L   M  +    D      ++   + +  ++EAK
Sbjct: 240 LDGLAIEKQTKKALELVGEMRSKEINPDVFTFYALIKGFVNEGNLEEAK 288


>gb|EXB75244.1| hypothetical protein L484_026026 [Morus notabilis]
          Length = 379

 Score =  155 bits (391), Expect = 9e-36
 Identities = 80/188 (42%), Positives = 124/188 (65%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           KGLKP++++FN+LL   Y    +++G+ +W  M +K   +VP+IRSYNAKL G+   G +
Sbjct: 191 KGLKPDVISFNTLLNAFYGSDRFADGDRIWDLMEKKF--VVPDIRSYNAKLLGLAYNGKV 248

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
             AVDL  E++ KG+ P+  ++N +I+GF  +G+L+ AK+WY  +  S   PN  TF  L
Sbjct: 249 NGAVDLIGEMKAKGIEPDVFSFNLVIEGFIKEGNLDGAKQWYSEMRKSERVPNKTTFEKL 308

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCF 543
           +  L + GD  LA +LS+ +  R F++D  LLQ VVD L+K+ KV+EAK LV+L ++N +
Sbjct: 309 IPFLRKQGDLDLAYELSQEVFLRRFVLDVALLQRVVDELVKESKVEEAKKLVELGKNNDY 368

Query: 544 YQYNLVMP 567
            +Y L +P
Sbjct: 369 RRYRLKLP 376


>ref|XP_004234466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Solanum lycopersicum]
          Length = 379

 Score =  155 bits (391), Expect = 9e-36
 Identities = 84/188 (44%), Positives = 117/188 (62%)
 Frame = +1

Query: 7   GLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGMLF 186
           GLKP+LVTFN++L   Y    + +GE++W  M+ K  ++ P+IRSYNAKL G++N   + 
Sbjct: 192 GLKPDLVTFNTILGVFYSNGKFDDGEKMWKLMVSK--NVAPDIRSYNAKLVGLMNENKVS 249

Query: 187 DAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHALV 366
           +A  L  EL    L P+  TY  LI+GFC   +LEEAKKWY  L+ SG  PN   F +++
Sbjct: 250 EAAKLVGELGSFKLKPDVFTYGALIRGFCKMSNLEEAKKWYKELVKSGSVPNKVIFVSVI 309

Query: 367 RLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCFY 546
              CE GD   AL+L K +  R   VD  LLQ VVD L+K  +++EAK +V L +SN ++
Sbjct: 310 SSACEKGDFDWALELCKEVFKRKCNVDAKLLQRVVDGLVKSSRIREAKEVVHLGKSNDYH 369

Query: 547 QYNLVMPS 570
            Y L +PS
Sbjct: 370 LYKLNLPS 377



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
 Frame = +1

Query: 28  TFNSLLIGAYEKKG-YSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGMLFDAVDLF 204
           +F + L+  Y K G +   ++++  M E+  +   +++S NA L   +N         LF
Sbjct: 92  SFAARLVSLYGKSGLFENAQKLFDEMPER--NCKQSVKSVNALLGACVNSQKYEKLEGLF 149

Query: 205 EELRIK-GLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHALVRLLCE 381
           EEL  K  + P+  TYN +IKG CD+G+L++A  +   +  +GL P+  TF+ ++ +   
Sbjct: 150 EELLEKLKVKPDVVTYNIMIKGLCDKGELDKAAAFVNEIEKNGLKPDLVTFNTILGVFYS 209

Query: 382 NGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLV 519
           NG       + K M+ +    D       +  L+ + KV EA  LV
Sbjct: 210 NGKFDDGEKMWKLMVSKNVAPDIRSYNAKLVGLMNENKVSEAAKLV 255


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  154 bits (388), Expect = 2e-35
 Identities = 74/176 (42%), Positives = 118/176 (67%)
 Frame = +1

Query: 7   GLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGMLF 186
           GL+P+L+TFN+LL   Y+   Y++GE++W  M  K  ++ PN+RSYNAKL+G+I+   + 
Sbjct: 203 GLEPDLITFNTLLNAFYQNGSYADGEKIWDLM--KKNNVAPNVRSYNAKLRGVISENRMS 260

Query: 187 DAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHALV 366
           +AV+L +E++  G+ P+  T N L+KGFC+ G+LEEAK+WY  +  + L P   T+  L+
Sbjct: 261 EAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLI 320

Query: 367 RLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARS 534
             L E GD  +A +L K +  R +L++P LLQ V++ L+K+ K++EA  L  + RS
Sbjct: 321 PFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELFLIFRS 376


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score =  153 bits (387), Expect = 3e-35
 Identities = 81/191 (42%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGM- 180
           K L+P+L+TFN+LL G Y    + +GE++W  M +K  +++P+IRSYNAKL G+++    
Sbjct: 194 KSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKK--NILPDIRSYNAKLVGLVSSEKR 251

Query: 181 LFDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHA 360
           + + + L EE++ KG+ P+  ++N LIKGFC+ G ++EA  WY  + ++   P+  TF  
Sbjct: 252 MLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSPDKLTFAT 311

Query: 361 LVRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNC 540
           LV L CE G    A +L K +  R  LVD  LLQ  VD L+K  KV EAK LV+L  SN 
Sbjct: 312 LVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQLGNSNS 371

Query: 541 FYQYNLVMPSE 573
           + +YNL +P++
Sbjct: 372 YRRYNLKIPTD 382


>ref|XP_006343276.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Solanum tuberosum]
          Length = 379

 Score =  153 bits (386), Expect = 3e-35
 Identities = 83/189 (43%), Positives = 117/189 (61%)
 Frame = +1

Query: 7   GLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGMLF 186
           GLKP+LVTFN++L   Y    + +GE++W  M+ K  ++VP+IRSYNAKL G++N   + 
Sbjct: 192 GLKPDLVTFNTILGVFYSNGKFDDGEKMWKLMVSK--NVVPDIRSYNAKLVGLMNENKVS 249

Query: 187 DAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHALV 366
           +A  L  EL    L P+  TY  LI+GFC   +LEEAKKWY  L+ S   PN   F +++
Sbjct: 250 EAAKLVGELGSFELKPDVFTYGALIRGFCKMSNLEEAKKWYEELVKSSSAPNKVIFASVI 309

Query: 367 RLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCFY 546
              CE GD   AL+L K +  R   VD  LLQ VVD L+   +++EAK +V L +SN ++
Sbjct: 310 SSACEKGDFDWALELCKEVFKRKCNVDAKLLQRVVDGLVSSSRIREAKEVVHLGKSNDYH 369

Query: 547 QYNLVMPSE 573
            Y L +PS+
Sbjct: 370 LYKLNLPSD 378



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
 Frame = +1

Query: 28  TFNSLLIGAYEKKG-YSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGMLFDAVDLF 204
           +F + L+  Y K G +   ++V+  M E+  +   +++S NA L   +N         LF
Sbjct: 92  SFAARLVSLYGKSGLFENAQKVFDEMPER--NCKQSVKSVNALLGACVNSQKYDKLEGLF 149

Query: 205 EELRIK-GLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHALVRLLCE 381
           EEL  K  + P+  TYN +IKG CD+G+L++A  +   +  +GL P+  TF+ ++ +   
Sbjct: 150 EELLEKLKVKPDVVTYNIMIKGLCDKGELDKAAAFVDEIEKNGLKPDLVTFNTILGVFYS 209

Query: 382 NGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLV 519
           NG       + K M+ +  + D       +  L+ + KV EA  LV
Sbjct: 210 NGKFDDGEKMWKLMVSKNVVPDIRSYNAKLVGLMNENKVSEAAKLV 255


>ref|XP_004293582.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 378

 Score =  151 bits (381), Expect = 1e-34
 Identities = 79/190 (41%), Positives = 121/190 (63%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           KG+KP+++TFN++L   Y  + +S+ +++W  M+EK  ++VP+IRSYNAKL G+      
Sbjct: 190 KGMKPDVITFNTILDCLYGNQRFSDAKKIWGVMVEK--NVVPDIRSYNAKLMGLALEKRS 247

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
            +  +L +ELR  G+ P+  ++N LIKGF  +G+LEEAK+WY  L+ SG  P+  TF  L
Sbjct: 248 KEGAELVKELRSSGVEPDVFSFNALIKGFVGEGNLEEAKRWYGELVKSGCAPDKWTFEML 307

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCF 543
           V   CE GD     +L K +  R  L    +LQ VVD L+K   +++AK LVKL  +N +
Sbjct: 308 VPFSCEKGDVEYGFELCKDIFQRRRLASAAMLQPVVDGLVKASMIEQAKELVKLGNTNSY 367

Query: 544 YQYNLVMPSE 573
            ++NL +PS+
Sbjct: 368 KRFNLKLPSD 377


>gb|EOY28516.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 383

 Score =  150 bits (378), Expect = 3e-34
 Identities = 72/185 (38%), Positives = 121/185 (65%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           KGL+P+++TFN+LL G + K   ++GE++W  M EK  ++VPN+R+YN+KL+G++    +
Sbjct: 200 KGLEPDVITFNTLLDGLFSKGRIADGEKIWGLMEEK--NVVPNVRTYNSKLRGLVYEKEI 257

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
             AV+L+EE+  KG+ P+  +YN +IKG+C+ G++E+ KKWY  L  SG+ P+  T+  L
Sbjct: 258 VKAVELWEEMENKGIKPDVYSYNAMIKGYCNAGNIEQVKKWYTELKKSGISPDRVTYVTL 317

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCF 543
           V  LC+  +  +A++L K  L R       + Q V+  L+K+ ++ EA  LV+L +S+  
Sbjct: 318 VSFLCKKSEFEMAVELCKESLDRRVTAGAAMFQTVIGGLVKESRIDEAIQLVELGKSSLH 377

Query: 544 YQYNL 558
           Y+  L
Sbjct: 378 YKLKL 382


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  150 bits (378), Expect = 3e-34
 Identities = 80/191 (41%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGM- 180
           K L+P+L+TFN+LL   Y    + +GE++W  M +K  +++P+IRSYNAKL G+++    
Sbjct: 194 KSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKK--NILPDIRSYNAKLVGLVSSEKR 251

Query: 181 LFDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHA 360
           + + + L EE++ KG+ P+  ++N LIKGFC+ G ++EA  WY  + ++   P+  TF  
Sbjct: 252 MLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSPDKLTFAT 311

Query: 361 LVRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNC 540
           LV L CE G    A +L K +  R  LVD  LLQ  VD L+K  KV EAK LV+L  SN 
Sbjct: 312 LVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQLGNSNS 371

Query: 541 FYQYNLVMPSE 573
           + +YNL +P++
Sbjct: 372 YRRYNLKIPTD 382


>ref|XP_002518586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542431|gb|EEF43973.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 377

 Score =  147 bits (372), Expect = 1e-33
 Identities = 81/188 (43%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
 Frame = +1

Query: 1   LKGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGM 180
           +KG  P+L+TFN+LL G Y    + +GE +W  M++K+  +VP+IRSYNAKL G+     
Sbjct: 192 MKGNPPDLITFNTLLNGFYSNGLFVDGERIWSQMVQKS--IVPDIRSYNAKLLGLALVKR 249

Query: 181 LFDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSG--LFPNGDTF 354
             DAV L +E++ KG+ P+  ++N LIKGF  + +LEEAK WY    +SG    P+  TF
Sbjct: 250 TKDAVLLLQEMKSKGIKPDVISFNALIKGFVKEENLEEAKYWYCETRNSGGDCGPDKFTF 309

Query: 355 HALVRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARS 534
             L+  +CE GD   A +LSK ++ R  LVD  LL+ VV+ L+K+ K+++A  LVKL  +
Sbjct: 310 TTLIPFVCEKGDLRFAFELSKDVISRKCLVDMALLKCVVEGLVKESKIQDANELVKLGMN 369

Query: 535 NCFYQYNL 558
           N + +Y L
Sbjct: 370 NGYCRYQL 377



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/169 (23%), Positives = 81/169 (47%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           +  K  +V+FN+LL      K + E + ++   L K  ++ P+  SYN  ++G    G L
Sbjct: 122 RNCKRTVVSFNALLAACVTSKKFDEVDGLFR-KLPKELEIKPDTVSYNTVIKGYCEMGAL 180

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
             A+ L  E+ +KG  P+  T+N L+ GF   G   + ++ +  ++   + P+  +++A 
Sbjct: 181 DKAISLLVEMEMKGNPPDLITFNTLLNGFYSNGLFVDGERIWSQMVQKSIVPDIRSYNAK 240

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAK 510
           +  L     +  A+ L + M  +    D      ++   +K+  ++EAK
Sbjct: 241 LLGLALVKRTKDAVLLLQEMKSKGIKPDVISFNALIKGFVKEENLEEAK 289


>ref|XP_004504952.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Cicer arietinum]
          Length = 378

 Score =  144 bits (364), Expect = 1e-32
 Identities = 76/189 (40%), Positives = 119/189 (62%)
 Frame = +1

Query: 7   GLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGMLF 186
           G+  +L+TFN+LL G Y K  + +GE++W  + EK  ++VP+IR+YNA+L G+       
Sbjct: 191 GVNTDLITFNTLLDGLYSKGRFEDGEKLWEKLGEK--NVVPDIRTYNARLLGLAVVKKTG 248

Query: 187 DAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHALV 366
           +A++ FEE++ KG+ P+  + N LIKGF ++G+L+EAKKWY  +  S   PN  T+  +V
Sbjct: 249 EAIEFFEEMKKKGVKPDLFSLNALIKGFVNEGNLDEAKKWYDAVGKSEYDPNKATYAIIV 308

Query: 367 RLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCFY 546
             LCE GD   AL++ K +      VD  LLQ+VVD L+ +  V EAK +V+  ++N   
Sbjct: 309 PFLCEKGDLKTALEMVKEIFNNRCRVDASLLQLVVDKLVSESMVTEAKEIVERGKTNSSG 368

Query: 547 QYNLVMPSE 573
           +Y L +P +
Sbjct: 369 RYKLNLPGD 377


>ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Cucumis sativus]
          Length = 398

 Score =  144 bits (364), Expect = 1e-32
 Identities = 77/187 (41%), Positives = 113/187 (60%)
 Frame = +1

Query: 7   GLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGMLF 186
           G++PNLVTFN+LL   Y K  + +GE VW  M  K  ++ P++ SYNA+L+GM+    + 
Sbjct: 210 GMEPNLVTFNTLLTALYRKGQFFDGERVWATMENK--NIAPDLVSYNARLRGMVLEKRIQ 267

Query: 187 DAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHALV 366
           D ++L  ++  K + P+  +YN LIKGFC  GDLEEAKKWY  L +S + P   T+  L+
Sbjct: 268 DGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKESEVDPIATTYRILL 327

Query: 367 RLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCFY 546
            LLCE GD    L L K  + + F+     +Q VV+ L +  K++EAK LV+L  S    
Sbjct: 328 PLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVNGLAEVSKIEEAKDLVELYNSKNNL 387

Query: 547 QYNLVMP 567
           ++ L +P
Sbjct: 388 KFKLKLP 394


>ref|NP_175985.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174230|sp|Q9LG23.1|PPR82_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g55890, mitochondrial; Flags: Precursor
           gi|8778306|gb|AAF79315.1|AC002304_8 F14J16.14
           [Arabidopsis thaliana] gi|18650654|gb|AAL75896.1|
           At1g55890/F14J16_4 [Arabidopsis thaliana]
           gi|53828645|gb|AAU94432.1| At1g55890 [Arabidopsis
           thaliana] gi|332195194|gb|AEE33315.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 398

 Score =  144 bits (364), Expect = 1e-32
 Identities = 74/190 (38%), Positives = 122/190 (64%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           KGLKP++VTFN+LL+ +Y K  +  GEE+W  M+EK  ++  +IR+YNA+L G+ N    
Sbjct: 209 KGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEK--NVAIDIRTYNARLLGLANEAKS 266

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
            + V+LF EL+  GL P+  ++N +I+G  ++G ++EA+ WY  ++  G  P+  TF  L
Sbjct: 267 KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCF 543
           +  +C+ GD   A++L K    + +LV    LQ +VD L+K  K +EA+ +VK+A++N F
Sbjct: 327 LPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDF 386

Query: 544 YQYNLVMPSE 573
            +  L +PS+
Sbjct: 387 LKLKLNLPSQ 396


>ref|XP_002891858.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297337700|gb|EFH68117.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 395

 Score =  144 bits (363), Expect = 2e-32
 Identities = 72/190 (37%), Positives = 123/190 (64%)
 Frame = +1

Query: 4   KGLKPNLVTFNSLLIGAYEKKGYSEGEEVWHWMLEKAGDLVPNIRSYNAKLQGMINGGML 183
           KGLKP++VTFN+LL+ +Y K  +  GEE+W  ++EK  ++  +IR+YNA+L G+ +    
Sbjct: 206 KGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKLVEK--NVPIDIRTYNARLLGLASEVKS 263

Query: 184 FDAVDLFEELRIKGLNPNTATYNHLIKGFCDQGDLEEAKKWYINLLDSGLFPNGDTFHAL 363
            + V LFEEL+  G+ P+  ++N +I+G  +QG ++EA+ WY  ++  G  P+  TF  L
Sbjct: 264 KELVSLFEELKASGIKPDVFSFNAMIRGSINQGKMDEAESWYKEIVKHGYRPDKATFALL 323

Query: 364 VRLLCENGDSGLALDLSKRMLGRYFLVDPDLLQMVVDTLLKDLKVKEAKSLVKLARSNCF 543
           +  +C+ GD   A++L K    + +LV    LQ +VD L+K  K +EA+ +V++A++N F
Sbjct: 324 LPAMCKAGDFEFAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVEIAKTNDF 383

Query: 544 YQYNLVMPSE 573
            +  L++PS+
Sbjct: 384 LKLKLILPSQ 393