BLASTX nr result

ID: Rheum21_contig00018795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00018795
         (531 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535171.1| conserved hypothetical protein [Ricinus comm...    71   1e-16
ref|XP_006826155.1| hypothetical protein AMTR_s05569p00002680, p...    61   2e-07
gb|AGC78984.1| hypothetical protein (mitochondrion) [Vicia faba]       58   1e-06

>ref|XP_002535171.1| conserved hypothetical protein [Ricinus communis]
           gi|223523835|gb|EEF27211.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 71.2 bits (173), Expect(2) = 1e-16
 Identities = 42/79 (53%), Positives = 47/79 (59%)
 Frame = -2

Query: 296 RQGKRATIFEPASSKQQRLFSRCALACSLGV**ASRTSKDA*F*ALTKKKGLTSAPSHCR 117
           R+G+R  IFE ASSKQQRLFSRCALA +                            S+CR
Sbjct: 5   RKGERE-IFELASSKQQRLFSRCALASA----------------------------SYCR 35

Query: 116 INNGSAGLDEQPSIWPLYQ 60
           INNGSAGLDEQPSIWP+YQ
Sbjct: 36  INNGSAGLDEQPSIWPIYQ 54



 Score = 40.4 bits (93), Expect(2) = 1e-16
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = -1

Query: 63  PVVEWLATFNQKRKIEQGK 7
           PVVEWL TFNQKRK+EQGK
Sbjct: 55  PVVEWLRTFNQKRKMEQGK 73


>ref|XP_006826155.1| hypothetical protein AMTR_s05569p00002680, partial [Amborella
           trichopoda] gi|548830305|gb|ERM93392.1| hypothetical
           protein AMTR_s05569p00002680, partial [Amborella
           trichopoda]
          Length = 82

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/87 (44%), Positives = 50/87 (57%)
 Frame = -2

Query: 503 YEAEQAQKLPAMIAELTR*AAQNLELTLKSEINVGSRLSEAD*SRRSQNKTQQGKRLSLA 324
           Y AEQ Q LPA+IAELTR AAQNLELT +SEINVGSR       R++Q +    K   + 
Sbjct: 6   YAAEQPQGLPAVIAELTRWAAQNLELTFESEINVGSR-------RKTQTEAPDHK---MQ 55

Query: 323 QKKANQSEWRQGKRATIFEPASSKQQR 243
             K      R+G+  +I   A  + +R
Sbjct: 56  HNKGRTKRLREGRSESIRMEAGRRGER 82


>gb|AGC78984.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 118

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
 Frame = -2

Query: 503 YEAEQAQKLPAMIAELTR*AAQNLELTLKSEIN----VGSRLSEAD*SRRSQNKTQQGKR 336
           Y AEQ Q LPA+IAELTR AAQN+ELT K   N       R ++ +     +N TQ+G+ 
Sbjct: 25  YAAEQPQGLPAVIAELTRWAAQNMELTFKEIGNQRRIPAIRKTQTEAGDHKKNATQKGRT 84

Query: 335 LSLAQKKANQSEWRQGKRA--TIFEPASSK 252
             L + ++  +    G+R    IFEPA  K
Sbjct: 85  KRLREGRSESTRMETGRRGEREIFEPAKKK 114


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