BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00018672
         (669 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...   449   e-124
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...   449   e-124
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...   449   e-124
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...   447   e-123
gb|AAX19931.1| viral replicase [Nandina mosaic virus]                 446   e-123
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...   446   e-123
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...   446   e-123
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...   446   e-123
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...   446   e-123
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a...   442   e-122
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...   403   e-110
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]             360   2e-97
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5...   357   2e-96
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo...   338   7e-91
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A...   335   1e-89
gb|AFM77886.1| replicase [Hosta virus X]                              320   2e-85
ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548...   320   2e-85
ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CA...   320   2e-85
ref|NP_148778.1| RNA-dependent RNA polymerase [Cactus virus X] g...   310   2e-82
ref|YP_054402.1| replication-associated protein [Zygocactus viru...   310   3e-82

>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  449 bits (1155), Expect = e-124
 Identities = 216/222 (97%), Positives = 222/222 (100%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            LKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML
Sbjct: 1057 LKKSVAQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 1116

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFR+ALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA
Sbjct: 1117 YGTMARYMRRFREALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 1176

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1177 MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTH 1236

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAK
Sbjct: 1237 TRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAK 1278


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  449 bits (1155), Expect = e-124
 Identities = 216/222 (97%), Positives = 221/222 (99%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            LKKS+SQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML
Sbjct: 1057 LKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 1116

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA
Sbjct: 1117 YGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 1176

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1177 MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTH 1236

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAK
Sbjct: 1237 TRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAK 1278


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
            gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
            replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
            [Plantago asiatica mosaic virus]
          Length = 1385

 Score =  449 bits (1154), Expect = e-124
 Identities = 216/222 (97%), Positives = 222/222 (100%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            LKK+++Q+KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAK+IKPGQTIASFQQHAVML
Sbjct: 1062 LKKTMAQLKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKEIKPGQTIASFQQHAVML 1121

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA
Sbjct: 1122 YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 1181

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH
Sbjct: 1182 MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 1241

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK
Sbjct: 1242 TRFDIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 1283


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  447 bits (1150), Expect = e-123
 Identities = 215/222 (96%), Positives = 220/222 (99%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            LKKS+SQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML
Sbjct: 1057 LKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 1116

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA
Sbjct: 1117 YGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 1176

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGP FDANTECNIAYTH
Sbjct: 1177 MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPAFDANTECNIAYTH 1236

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAK
Sbjct: 1237 TRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAK 1278


>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  446 bits (1147), Expect = e-123
 Identities = 215/222 (96%), Positives = 221/222 (99%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            LKKS++Q+KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML
Sbjct: 1045 LKKSLNQLKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 1104

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVL+YWDFSKP+YANDFTAFDQSQDGA
Sbjct: 1105 YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLSYWDFSKPAYANDFTAFDQSQDGA 1164

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH
Sbjct: 1165 MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 1224

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF IPEGTAQIYAGDDCAIAQVCPEKPSFALLK+RIALQAK
Sbjct: 1225 TRFNIPEGTAQIYAGDDCAIAQVCPEKPSFALLKDRIALQAK 1266


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  446 bits (1147), Expect = e-123
 Identities = 214/222 (96%), Positives = 220/222 (99%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            LKKS+SQIKGGERRQSPDFHEH ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML
Sbjct: 1057 LKKSVSQIKGGERRQSPDFHEHHILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 1116

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFRDAL PNNIMINCE+TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA
Sbjct: 1117 YGTMARYMRRFRDALRPNNIMINCERTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 1176

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1177 MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTH 1236

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAK
Sbjct: 1237 TRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAK 1278


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  446 bits (1146), Expect = e-123
 Identities = 215/222 (96%), Positives = 220/222 (99%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            LKKS+SQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML
Sbjct: 1057 LKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 1116

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGA
Sbjct: 1117 YGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGA 1176

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1177 MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTH 1236

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAK
Sbjct: 1237 TRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAK 1278


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  446 bits (1146), Expect = e-123
 Identities = 215/222 (96%), Positives = 220/222 (99%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            LKKS+SQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML
Sbjct: 1057 LKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 1116

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGA
Sbjct: 1117 YGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGA 1176

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1177 MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTH 1236

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAK
Sbjct: 1237 TRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAK 1278


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  446 bits (1146), Expect = e-123
 Identities = 215/222 (96%), Positives = 220/222 (99%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            LKKS+SQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML
Sbjct: 1057 LKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 1116

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGA
Sbjct: 1117 YGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGA 1176

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1177 MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTH 1236

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAK
Sbjct: 1237 TRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAK 1278


>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
            virus]
          Length = 711

 Score =  442 bits (1138), Expect = e-122
 Identities = 212/222 (95%), Positives = 220/222 (99%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            LKKS++QIKGG+RRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML
Sbjct: 388  LKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 447

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGA
Sbjct: 448  YGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGA 507

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTH
Sbjct: 508  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTH 567

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IPEG AQIYAGDDCAI+QVCPEKPSF+LLKNRIALQAK
Sbjct: 568  TRFDIPEGAAQIYAGDDCAISQVCPEKPSFSLLKNRIALQAK 609


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
            gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
            [Tulip virus X]
          Length = 1361

 Score =  403 bits (1036), Expect = e-110
 Identities = 194/222 (87%), Positives = 208/222 (93%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            L KS+ QIKGGERRQSPDF E++ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVML
Sbjct: 1038 LSKSLQQIKGGERRQSPDFPENKILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVML 1097

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRR+RDAL PNNIMINCE+TP DLSRWV N+WDF+KP YANDFTAFDQSQDGA
Sbjct: 1098 YGTMARYMRRYRDALGPNNIMINCERTPADLSRWVRNHWDFTKPXYANDFTAFDQSQDGA 1157

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAK+FNLPEWVIEGYLDIKL+P+IF GTL+IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1158 MLQFEILKAKFFNLPEWVIEGYLDIKLTPQIFTGTLAIMRLTGEGPTFDANTECNIAYTH 1217

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF IP+  AQ+YAGDDCAIA+VC EKPSFALLKNRIALQAK
Sbjct: 1218 TRFHIPDHVAQLYAGDDCAIAEVCQEKPSFALLKNRIALQAK 1259


>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  360 bits (924), Expect = 2e-97
 Identities = 173/222 (77%), Positives = 194/222 (87%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            L K ++ +K GERRQSPDF +HQIL+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVML
Sbjct: 1064 LSKPMNMLKNGERRQSPDFEKHQILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVML 1123

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFR+ L PN+I INCE TP+DLSR++ NYWDF   SYANDFTAFDQSQDGA
Sbjct: 1124 YGTMARYMRRFREVLGPNHIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDGA 1183

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAK+FN+PE +I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1184 MLQFEILKAKHFNIPEEIIQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTH 1243

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IP GTAQ+YAGDD AIA V PE+PSF L+   +AL+AK
Sbjct: 1244 TRFDIPPGTAQLYAGDDSAIACVPPERPSFKLIAKSLALEAK 1285


>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
            viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  357 bits (915), Expect = 2e-96
 Identities = 172/222 (77%), Positives = 193/222 (86%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            L K ++ +K GERRQSPDF +HQIL+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVML
Sbjct: 1064 LSKPMNMLKNGERRQSPDFEKHQILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVML 1123

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRRFR+AL PN+I INCE TP+DLSR++ NYWDF   SYANDFTAFDQSQD A
Sbjct: 1124 YGTMARYMRRFREALGPNHIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDAA 1183

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAK+FN+P  +I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1184 MLQFEILKAKHFNIPGEIIQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTH 1243

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            TRF+IP GTAQ+YAGDD AIA V PE+PSF L+   +AL+AK
Sbjct: 1244 TRFDIPPGTAQLYAGDDSAIACVPPERPSFKLIAKSLALEAK 1285


>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
            gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
            RNA polymerase [Cassava common mosaic virus]
            gi|1587823|prf||2207297A ORF 1
          Length = 1449

 Score =  338 bits (868), Expect = 7e-91
 Identities = 167/220 (75%), Positives = 183/220 (83%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            L KS   +K GERRQSPDF E  ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVML
Sbjct: 1131 LSKSTQMLKNGERRQSPDFGEKDILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVML 1190

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRR RD   P +IMINCE+TP DLS W LNYW+F KPSYANDFTAFDQSQDGA
Sbjct: 1191 YGTMARYMRRIRDIYMPEHIMINCERTPTDLSYWALNYWNFDKPSYANDFTAFDQSQDGA 1250

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAK+ N+PEWV+EGYLDIKL  +IFLGTLSIMRLTGE  TFDANTECNIAYTH
Sbjct: 1251 MLQFEILKAKHHNIPEWVLEGYLDIKLDSRIFLGTLSIMRLTGEYQTFDANTECNIAYTH 1310

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQ 662
            TRF+IPEG AQ     D A+   C EKPSF L+++ ++L+
Sbjct: 1311 TRFDIPEGVAQ-----DSAMDATCLEKPSFKLIESELSLK 1345


>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
            [Allium virus X]
          Length = 1701

 Score =  335 bits (858), Expect = 1e-89
 Identities = 159/222 (71%), Positives = 185/222 (83%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            L K I+ +K GE RQSPDF ++ I +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVML
Sbjct: 1385 LSKPINMLKNGEYRQSPDFDKNTIALFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVML 1444

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRR R+A  P  IMINCEK PQ LS W+ NYW F+  +YANDFT FDQSQDGA
Sbjct: 1445 YGTMARYMRRMREAFQPPEIMINCEKDPQTLSHWIQNYWKFNSYAYANDFTQFDQSQDGA 1504

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAK+ ++PEWV+EGYLDIK + K+F G LSIMRLTGEGPTFDANTECNIAYTH
Sbjct: 1505 MLQFEILKAKHHSIPEWVLEGYLDIKTNAKVFSGVLSIMRLTGEGPTFDANTECNIAYTH 1564

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
             RF++P+GTAQ+YAGDD A++ + PE+PSFA  K ++ L +K
Sbjct: 1565 LRFDVPKGTAQLYAGDDSALSCLPPERPSFADFKQQLTLTSK 1606


>gb|AFM77886.1| replicase [Hosta virus X]
          Length = 1473

 Score =  320 bits (820), Expect = 2e-85
 Identities = 154/222 (69%), Positives = 181/222 (81%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            L K I+ IK GE+RQ PDF ++ I++FLKSQWVKKMEKLGA  IKPGQTIASF Q  VML
Sbjct: 1137 LSKPINLIKNGEKRQGPDFDKNAIMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVML 1196

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRR RD   P +I+INCEKTP  +S +V   WDFS  +YANDFTAFDQSQDGA
Sbjct: 1197 YGTMARYMRRIRDRFCPKHILINCEKTPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGA 1256

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEI+KAK+ N+PE +I GY+DIK + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1257 MLQFEIIKAKFHNIPEDIILGYMDIKTNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTH 1316

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
             RF +PE  AQ+YAGDD A+++VCPEK SF    +R+ L++K
Sbjct: 1317 LRFNVPENVAQVYAGDDSALSKVCPEKDSFKQFADRLTLKSK 1358


>ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548097|gb|AEO12140.1|
            replicase [Tamus red mosaic virus]
          Length = 1501

 Score =  320 bits (820), Expect = 2e-85
 Identities = 150/222 (67%), Positives = 179/222 (80%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            L K +  +K GE RQSPDFH++ I +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVML
Sbjct: 1184 LSKPMHMLKNGELRQSPDFHKNTIALFLKSQWVKKMEKLGADKIKPGQTIASFQQAAVML 1243

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRR R+   P ++ INCE++P+ +S W+ N W+F   +YANDFT FDQSQDGA
Sbjct: 1244 YGTMARYMRRMREVFQPTHVFINCEQSPEGMSDWIKNEWNFKGNAYANDFTQFDQSQDGA 1303

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKAK+ ++PEWV+EGYLDIK +  +F GTL IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1304 MLQFEILKAKHHSIPEWVLEGYLDIKTNAHVFTGTLGIMRLTGEGPTFDANTECNIAYTH 1363

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
             RF +P+GTAQ YAGDD  +A +  E+ SF + KN++ L AK
Sbjct: 1364 LRFNVPKGTAQAYAGDDSVLACIPEERESFKMWKNKLELTAK 1405


>ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CAF04078.1| replicase
            [Hosta virus X]
          Length = 1507

 Score =  320 bits (820), Expect = 2e-85
 Identities = 154/222 (69%), Positives = 181/222 (81%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            L K I+ IK GE+RQ PDF ++ I++FLKSQWVKKMEKLGA  IKPGQTIASF Q  VML
Sbjct: 1171 LSKPINLIKNGEKRQGPDFDKNAIMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVML 1230

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRR RD   P +I+INCEKTP  +S +V   WDFS  +YANDFTAFDQSQDGA
Sbjct: 1231 YGTMARYMRRIRDRFCPKHILINCEKTPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGA 1290

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEI+KAK+ N+PE +I GY+DIK + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH
Sbjct: 1291 MLQFEIIKAKFHNIPEDIILGYMDIKTNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTH 1350

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
             RF +PE  AQ+YAGDD A+++VCPEK SF    +R+ L++K
Sbjct: 1351 LRFNVPENVAQVYAGDDSALSKVCPEKDSFKQFADRLTLKSK 1392


>ref|NP_148778.1| RNA-dependent RNA polymerase [Cactus virus X]
            gi|14582654|gb|AAK69579.1|AF308158_1 RNA-dependent RNA
            polymerase [Cactus virus X]
          Length = 1543

 Score =  310 bits (795), Expect = 2e-82
 Identities = 145/222 (65%), Positives = 179/222 (80%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            L K +  ++ G+ RQSPDF    I +FLKSQWVKK+EKLG  +IK GQTIASFQQ AVML
Sbjct: 1224 LSKPLHMLQNGQARQSPDFDPKMISLFLKSQWVKKIEKLGQPRIKAGQTIASFQQEAVML 1283

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRR R+   P NIMINCE+TP++L+ W   +W+F++ SYAND+TAFDQSQDGA
Sbjct: 1284 YGTMARYMRRVREVFQPKNIMINCERTPEELTSWAAEHWNFNRNSYANDYTAFDQSQDGA 1343

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKA++ ++PE  IEGYLD+K S   FLG L IMRLTGEGPTFDANTECNIA+ H
Sbjct: 1344 MLQFEILKARHHSIPEVYIEGYLDLKCSSMTFLGILKIMRLTGEGPTFDANTECNIAFAH 1403

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            T+ +IP GTAQ+YAGDDCA+A V  +KPSF +++  ++L+AK
Sbjct: 1404 TKLKIPIGTAQLYAGDDCALATVPEDKPSFKMIETEVSLKAK 1445


>ref|YP_054402.1| replication-associated protein [Zygocactus virus X]
            gi|38146347|gb|AAR11542.1| replication-associated protein
            [Zygocactus virus X]
          Length = 1543

 Score =  310 bits (794), Expect = 3e-82
 Identities = 148/222 (66%), Positives = 177/222 (79%)
 Frame = +3

Query: 3    LKKSISQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVML 182
            L K +  +K GE RQSPDF    I +FLKSQWVKK+EKLG  +IK GQTIASFQQ AVML
Sbjct: 1225 LSKPLHLLKNGEGRQSPDFDPKAISLFLKSQWVKKVEKLGQPRIKAGQTIASFQQEAVML 1284

Query: 183  YGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGA 362
            YGTMARYMRR R+   P  IMINCE TP++LS+W L +W+F++ SYAND+TAFDQSQDG+
Sbjct: 1285 YGTMARYMRRVREVFQPKEIMINCELTPEELSKWALEHWNFNRNSYANDYTAFDQSQDGS 1344

Query: 363  MLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTH 542
            MLQFEILKA++ ++PE  IEGYLD+K S K FLG L IMRLTGEGPTFDANTECNIA+ H
Sbjct: 1345 MLQFEILKARHHSIPEVYIEGYLDLKCSSKTFLGILKIMRLTGEGPTFDANTECNIAFAH 1404

Query: 543  TRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAK 668
            T+ +IP GTAQ+YAGDDCA   V  EKPSF  ++  ++L+AK
Sbjct: 1405 TKLKIPIGTAQLYAGDDCAFDYVPEEKPSFKTIETEVSLKAK 1446