BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00018578
         (990 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65994.1| hypothetical protein [Beta vulgaris subsp. vulga...   110   8e-22
ref|XP_006282222.1| hypothetical protein CARUB_v10028495mg, part...    64   1e-07
gb|EMJ08164.1| hypothetical protein PRUPE_ppb019035mg [Prunus pe...    63   2e-07
ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, part...    60   2e-06
ref|XP_006299881.1| hypothetical protein CARUB_v10016088mg, part...    59   2e-06
ref|XP_006293025.1| hypothetical protein CARUB_v10019305mg, part...    59   2e-06
emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]    59   2e-06
ref|XP_006382338.1| hypothetical protein POPTR_0005s01170g, part...    59   4e-06
gb|ABW81177.1| gag non-LTR retrotransposase [Arabidopsis cebenne...    58   5e-06
ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, part...    58   6e-06
ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, part...    57   8e-06
ref|XP_006286068.1| hypothetical protein CARUB_v10007601mg, part...    57   8e-06
ref|XP_006285607.1| hypothetical protein CARUB_v10007057mg, part...    57   8e-06
ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, part...    57   8e-06

>emb|CCA65994.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 803

 Score =  110 bits (275), Expect = 8e-22
 Identities = 56/169 (33%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
 Frame = +1

Query: 499 IVNTTEANPPYVNKNSVDSNSETHSLPLMNKHVIDMKLY-----LLKLFVVRENILKLRE 663
           +V  +++   Y +   V+S +  +  PL   ++ D  ++     L  L  V+++I +L +
Sbjct: 285 VVGQSDSTKKYTSV--VESKNPLNESPLPPNNLHDPPVFPETCVLDDLPQVKKDICELSK 342

Query: 664 SSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPIDQKKAWDGRP 843
           S L G ++   +D   + S+ K DWR +KG  + LE  N W  + FANP D    W  RP
Sbjct: 343 SCLFGKMLSAPLDIRTIISRTKADWRVVKGDVDYLEMGNGWILLRFANPQDLALVWSERP 402

Query: 844 YHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEYISFDALSTI 990
           +H+ G L++L+PW  +FDP+ E I  VD+W+RIP L  E ++FD+++ +
Sbjct: 403 WHIQGDLLVLQPWKPSFDPYLEEIKWVDLWVRIPRLPTELLNFDSIANL 451


>ref|XP_006282222.1| hypothetical protein CARUB_v10028495mg, partial [Capsella rubella]
           gi|482550926|gb|EOA15120.1| hypothetical protein
           CARUB_v10028495mg, partial [Capsella rubella]
          Length = 409

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 36/110 (32%), Positives = 57/110 (51%)
 Frame = +1

Query: 634 VRENILKLRESSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPI 813
           V E +  L  + +I  ++G  +    L  K K  W+  +G   +L+ P  +F I F    
Sbjct: 84  VLEVMYGLYRNCMIVKVLGRHITIDALNRKLKEMWK-PRGGMAVLDLPRQFFMIRFDLEE 142

Query: 814 DQKKAWDGRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEY 963
           D   A  G P+ VFG ++++K WS +FDP  + I T  +W+RI +L V Y
Sbjct: 143 DYMAAVTGGPWRVFGSILMVKAWSPDFDPVRDDIVTTPVWVRISNLPVFY 192


>gb|EMJ08164.1| hypothetical protein PRUPE_ppb019035mg [Prunus persica]
          Length = 409

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 31/119 (26%), Positives = 65/119 (54%)
 Frame = +1

Query: 634 VRENILKLRESSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPI 813
           V+E + +   +S+I  ++G    +  + ++ ++ W  IKG +++++  N +F + F    
Sbjct: 136 VKERLYRPWRTSIIIKLMGKAHTYNFVLARLQHRWGMIKGPWKLIDLENGFFIVRFVLEE 195

Query: 814 DQKKAWDGRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEYISFDALSTI 990
           D K    G P+ + G+ ++++ W   FDP  E +T + +W+RI  L VE+   +A+  I
Sbjct: 196 DMKAILCGGPWVIAGQYLVMQRWKPGFDPLVEQVTRMTVWVRIIGLHVEWFRPEAMLRI 254


>ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, partial [Capsella rubella]
           gi|482564485|gb|EOA28675.1| hypothetical protein
           CARUB_v10024899mg, partial [Capsella rubella]
          Length = 451

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 32/112 (28%), Positives = 56/112 (50%)
 Frame = +1

Query: 655 LRESSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPIDQKKAWD 834
           L ++ +I  ++G  +  A L  K K  W+   G   +++ P  +F + F    +   A  
Sbjct: 76  LWKNCMIVKVLGRQIPVAVLNRKLKELWK-PSGRMYVMDLPRHFFMVRFELEEEYLNALT 134

Query: 835 GRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEYISFDALSTI 990
           G P+ VFG  ++++ WS NFDP  + I T  +W+R+ ++ V Y     L  I
Sbjct: 135 GGPWRVFGNYLMVQQWSPNFDPLKDDIVTTPVWVRLMNIPVWYYHKSILMAI 186


>ref|XP_006299881.1| hypothetical protein CARUB_v10016088mg, partial [Capsella rubella]
           gi|482568590|gb|EOA32779.1| hypothetical protein
           CARUB_v10016088mg, partial [Capsella rubella]
          Length = 340

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 29/98 (29%), Positives = 54/98 (55%)
 Frame = +1

Query: 670 LIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPIDQKKAWDGRPYH 849
           +I  ++G ++  + L  + ++ W+   G+  +++ P  +F I F    +   A  G P+ 
Sbjct: 81  MIVKVLGRSVSVSVLSRRLRDLWK-PAGAMHVMDLPRQFFMIRFEKEEEYMAALTGGPWR 139

Query: 850 VFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEY 963
           VFG  +L + WS +FDP  + ITT  +WIR+ +L V +
Sbjct: 140 VFGSCLLTQAWSPSFDPLRDEITTTPVWIRLSNLPVNF 177


>ref|XP_006293025.1| hypothetical protein CARUB_v10019305mg, partial [Capsella rubella]
           gi|482561732|gb|EOA25923.1| hypothetical protein
           CARUB_v10019305mg, partial [Capsella rubella]
          Length = 361

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 29/103 (28%), Positives = 54/103 (52%)
 Frame = +1

Query: 655 LRESSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPIDQKKAWD 834
           L +  +I  ++G  +  A L  K +  WR  KG+  +++ P  +F + F    +  +A  
Sbjct: 76  LWKQCMIVKVLGRHVSIAVLLKKLREMWR-PKGAMYVVDLPRQFFMVRFELEDEYLEALT 134

Query: 835 GRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEY 963
           G P+ +FG  +++K W   FDP  + I T  +WIR+ ++ V +
Sbjct: 135 GGPWRIFGSYLMVKAWEPEFDPMTDEIVTTPVWIRLSNIPVNF 177


>emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]
          Length = 833

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 33/118 (27%), Positives = 60/118 (50%)
 Frame = +1

Query: 637 RENILKLRESSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPID 816
           +EN+    + SLI  ++G  +     ++     W  ++G+ +I++    +F + F+ P D
Sbjct: 93  KENLSAPWKYSLIAKVLGRKVGLQYCQAHLHRLWS-LEGTVDIIDLGYGFFLLKFSLPTD 151

Query: 817 QKKAWDGRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEYISFDALSTI 990
             K + G P+ + G  + L+PW  NF P    IT   +W+R+P L +EY   + L  I
Sbjct: 152 YIKVFKGVPWLIHGYYISLRPWVPNFKPSEATITHAKVWVRLPELPIEYYDKEVLLQI 209


>ref|XP_006382338.1| hypothetical protein POPTR_0005s01170g, partial [Populus
           trichocarpa] gi|550337696|gb|ERP60135.1| hypothetical
           protein POPTR_0005s01170g, partial [Populus trichocarpa]
          Length = 270

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
 Frame = +1

Query: 616 LLKLFVVRENILKLRE---SSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFW 786
           +++LF+  E   ++RE    +LI  ++G  + +  L  + +  W+ I+G   +++  N +
Sbjct: 58  VIRLFM--EEKKRIREPWRQTLIIKVLGCRVSYTFLLKRLQIIWK-IQGDLNLVDLGNDF 114

Query: 787 FEICFANPIDQKKAWDGRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEY 963
           F   F+N  D++ A  G P+ V    + ++ W  NFDP    I  V +WIR+P L +EY
Sbjct: 115 FLARFSNKEDRESAMSGGPWMVADHYLTMRSWHPNFDPNVATIEKVAVWIRLPDLAMEY 173


>gb|ABW81177.1| gag non-LTR retrotransposase [Arabidopsis cebennensis]
          Length = 496

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 32/103 (31%), Positives = 55/103 (53%)
 Frame = +1

Query: 655 LRESSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPIDQKKAWD 834
           L +  +I  ++G  +  + L  K +  W+ + G   +++ P  +F I FA+  +   A  
Sbjct: 70  LWKKCIIVKVLGRNVSVSVLSRKLRELWKPV-GEMSVMDLPRQFFMIRFASE-EYMGALT 127

Query: 835 GRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEY 963
           G P  VFG  +LL+ W  +FDP  + ITT  +WIR+ +L V +
Sbjct: 128 GGPQRVFGSYLLLQAWDPDFDPLRDEITTTPVWIRLSNLPVTF 170


>ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, partial [Capsella rubella]
           gi|482561670|gb|EOA25861.1| hypothetical protein
           CARUB_v10019240mg, partial [Capsella rubella]
          Length = 405

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 26/94 (27%), Positives = 52/94 (55%)
 Frame = +1

Query: 670 LIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPIDQKKAWDGRPYH 849
           +I  ++G  +  A +  K +  W+  KG+  + + P  +F + F    +  +A  G P+ 
Sbjct: 49  MIVKVLGRNIPIAAMSRKLRELWK-PKGAMHVTDLPRQFFMVRFDMEEEYMEALTGGPWK 107

Query: 850 VFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHL 951
           VFG  ++++ WS +FDP  + ITT  +W+R+ ++
Sbjct: 108 VFGSYLMVQDWSPDFDPMRDEITTTPVWVRLSNI 141


>ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, partial [Capsella rubella]
           gi|482564602|gb|EOA28792.1| hypothetical protein
           CARUB_v10025024mg, partial [Capsella rubella]
          Length = 507

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 30/103 (29%), Positives = 53/103 (51%)
 Frame = +1

Query: 655 LRESSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPIDQKKAWD 834
           L ++ +I  ++G  +  A L  K +  W   KG   +++ P  +F + F    D      
Sbjct: 94  LWKNCMIVKVLGRNVPLAPLLRKLRELWA-PKGGMTVIDLPRQFFLVRFELEDDYMGVVT 152

Query: 835 GRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEY 963
           G P+ +FG L++ + WS +F+P  + I T  +W+RI +L V Y
Sbjct: 153 GGPWRLFGSLLMFQAWSPSFNPMQDEIETTPVWVRISNLPVHY 195


>ref|XP_006286068.1| hypothetical protein CARUB_v10007601mg, partial [Capsella rubella]
           gi|482554773|gb|EOA18966.1| hypothetical protein
           CARUB_v10007601mg, partial [Capsella rubella]
          Length = 459

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 30/106 (28%), Positives = 56/106 (52%)
 Frame = +1

Query: 634 VRENILKLRESSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPI 813
           V E +  L +  +I  ++G +M  A +  K K  WR  +G+  + + P+ +F + F    
Sbjct: 66  VMEAMNGLWKKCMIVKVLGRSMSIAVMSRKLKEMWR-PQGAMVVTDLPHQFFVVRFELEE 124

Query: 814 DQKKAWDGRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHL 951
           +   A  G P+ +FG  ++++ WS +FDP    I T  +WIR+ ++
Sbjct: 125 EYMAALTGGPWKMFGSYLMVQAWSPDFDPLRNDIVTTPVWIRLSNI 170


>ref|XP_006285607.1| hypothetical protein CARUB_v10007057mg, partial [Capsella rubella]
           gi|482554312|gb|EOA18505.1| hypothetical protein
           CARUB_v10007057mg, partial [Capsella rubella]
          Length = 394

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 28/112 (25%), Positives = 58/112 (51%)
 Frame = +1

Query: 655 LRESSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPIDQKKAWD 834
           L ++ ++  ++G  +  A L  + ++ W   +  F +L+ P  +F + F +  +   A  
Sbjct: 76  LWKNCMVVKVLGRNITIAVLSRRLRDMWNPSRDMF-VLDLPRQFFMVRFESEEEYMAALT 134

Query: 835 GRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEYISFDALSTI 990
           G P+ +FG  ++ + WS +FDP  + ITT  +W+R+ ++ V +     L  I
Sbjct: 135 GGPWKIFGSYLMAQAWSPDFDPIRDEITTTPVWVRLSNIPVTFYHTSILEEI 186


>ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, partial [Capsella rubella]
           gi|482547819|gb|EOA12095.1| hypothetical protein
           CARUB_v10016517mg, partial [Capsella rubella]
          Length = 457

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 31/109 (28%), Positives = 57/109 (52%)
 Frame = +1

Query: 655 LRESSLIGYIIGDTMDFAKLRSKFKNDWRFIKGSFEILEKPNFWFEICFANPIDQKKAWD 834
           L +  +I  ++G ++  + L  K K  W+   G   +++ P  +F I F    +   A  
Sbjct: 72  LWKQCIIVKVLGRSIVLSALSRKLKELWK-PTGEMSVVDLPRQFFMIRFEREEEYLAALT 130

Query: 835 GRPYHVFGKLMLLKPWSSNFDPFFEPITTVDMWIRIPHLLVEYISFDAL 981
           G P+ VFG  ++++ WSS+F+P  + I T  +W+R+ +L V +   D L
Sbjct: 131 GGPWRVFGSHLMVQAWSSDFNPLRDDIVTTPVWVRLSNLPVFFYHQDIL 179