BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00018203
         (1436 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   474   e-131
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   471   e-130
gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [...   462   e-127
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   457   e-126
gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [...   456   e-125
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   455   e-125
ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutr...   453   e-125
gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   450   e-124
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   448   e-123
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   447   e-123
ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   447   e-123
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   447   e-123
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop...   446   e-122
dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] g...   446   e-122
gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]                       446   e-122
ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like ...   445   e-122
gb|ESW20554.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   444   e-122
ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arab...   442   e-121
ref|XP_006305124.1| hypothetical protein CARUB_v10009493mg [Caps...   441   e-121
ref|XP_006471141.1| PREDICTED: tRNA pseudouridine synthase-like ...   439   e-120

>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca subsp.
            vesca]
          Length = 350

 Score =  474 bits (1221), Expect = e-131
 Identities = 237/370 (64%), Positives = 286/370 (77%)
 Frame = +2

Query: 179  KLNREHNSHSPQRPPKVARSLGEDPRHVYDDXXXXXXXXXXXXXXXIAEKQMMNPRPGLQ 358
            K + E  S SP+RP K++++  E+                       AE + M+   G+Q
Sbjct: 6    KHSLESRSQSPKRPSKISKTTSEE-----------------------AEAESMSKPQGIQ 42

Query: 359  RYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSRTDAGVHALSNVC 538
            RYL+AIEY GTRF GSQQQ  C+TVVGVLEEAF+KFIGQPV IFCSSRTDAGVHALSNVC
Sbjct: 43   RYLIAIEYIGTRFSGSQQQSNCRTVVGVLEEAFRKFIGQPVSIFCSSRTDAGVHALSNVC 102

Query: 539  HVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIPSDFHARYKALER 718
            HVD+ERISKRKPGEVLPPHEP  V+RA+NHFLQK++ DVMV DVR +P+DFHAR+KA ER
Sbjct: 103  HVDIERISKRKPGEVLPPHEPIVVQRAVNHFLQKNEGDVMVVDVRSVPADFHARFKAQER 162

Query: 719  TYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSSFRASGCQAKSPV 898
            TY+YRLL GP+P+S FEKDRAWH+PEE+++ AMQEACK+LVG HDFSSFRA+GCQAKSP+
Sbjct: 163  TYFYRLLSGPEPLSTFEKDRAWHIPEELDVLAMQEACKILVGHHDFSSFRAAGCQAKSPI 222

Query: 899  RTLDELRVSESVSTPYIPSPLGSEQWNFDGDKISTSFDGHKAGCAAAISNGSSLQFGIKK 1078
            RTLDEL VSE VS+P  P+ +     N     I  + +  +A C ++ + G+   FG++K
Sbjct: 223  RTLDELNVSEVVSSPNFPT-IAERTRNLVQKDIQCT-NNPEADCHSSFNGGTDQGFGLRK 280

Query: 1079 LHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQRILDAKTVTAAKPMAPACGL 1258
             HRC+VVTARAR+FLYHQVRLLVGVLKCVGTG+L + D +RIL+AKTVTAA PMAPACGL
Sbjct: 281  KHRCIVVTARARAFLYHQVRLLVGVLKCVGTGDLKIPDVERILNAKTVTAASPMAPACGL 340

Query: 1259 YLGQVRYDLP 1288
            YLG VRYDLP
Sbjct: 341  YLGHVRYDLP 350


>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
            gi|297739525|emb|CBI29707.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  471 bits (1211), Expect = e-130
 Identities = 246/382 (64%), Positives = 287/382 (75%), Gaps = 9/382 (2%)
 Frame = +2

Query: 170  PFSKLNREHNSHSPQRPPKVARSLGEDPRHVYDDXXXXXXXXXXXXXXXIAEKQM-MNPR 346
            P   LNR   S SPQRP K+AR+         D                +A K M  NPR
Sbjct: 18   PKHLLNRR--SESPQRPSKIARTDDLSDGEQQDS---------------VASKTMTQNPR 60

Query: 347  PGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSRTDAGVHAL 526
              +QRYLVA+EY GTRF GSQQQ  C+TV G L+EAF KFIGQPV IFCSSRTDAGVHAL
Sbjct: 61   --VQRYLVAVEYIGTRFSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRTDAGVHAL 118

Query: 527  SNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIPSDFHARYK 706
            SNVCHVDVERISKRKPGEVLPPHEP+ V+RA+NHFLQK++ DVMV DVRC+P DFHARYK
Sbjct: 119  SNVCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPPDFHARYK 178

Query: 707  ALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSSFRASGCQA 886
            A ERTY+YRLL GP+P+S FEKDRAWHVPE+++L AMQ+AC+VLVGCHDFSSFRA+GCQA
Sbjct: 179  ARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRAAGCQA 238

Query: 887  KSPVRTLDELRVSESVSTPYIPSPLGSEQWNF-DGDKISTSFDGHKAGCAAAIS------ 1045
            KSP+RTLDEL VSE + TPY PS     Q NF + + ++ S +       +  +      
Sbjct: 239  KSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRLDG 298

Query: 1046 -NGSSLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQRILDAKTV 1222
             NG+   FG+++ HRC +VTARARSFLYHQVRLLVGV+KCVGTG+L+VSD +RIL+AKTV
Sbjct: 299  FNGAGQGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTV 358

Query: 1223 TAAKPMAPACGLYLGQVRYDLP 1288
            TAA PMAPACGLYLG V YDLP
Sbjct: 359  TAASPMAPACGLYLGNVNYDLP 380


>gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  462 bits (1188), Expect = e-127
 Identities = 234/332 (70%), Positives = 265/332 (79%), Gaps = 10/332 (3%)
 Frame = +2

Query: 323  EKQMMNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSR 502
            ++  M+  P +QRYLVAIEY GTRF GSQQQP C+TVVGVLEEAF KFIGQPV IFCSSR
Sbjct: 40   QESSMSKNPRIQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSR 99

Query: 503  TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIP 682
            TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPS V+RA+NHFLQK + D+ V DVRC+P
Sbjct: 100  TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDVRCVP 159

Query: 683  SDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSS 862
            +DFHARYKA ERTY+YRLL G +P+S FEK+RAWHVPE+++L AMQEACKVLVG HDFSS
Sbjct: 160  NDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVGHHDFSS 219

Query: 863  FRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNFDGD---------KISTSFDG 1015
            FRA+GCQAKSP+RTLDEL VSE+  TPY PS    +Q N   +         +I    D 
Sbjct: 220  FRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEIDLPIDS 279

Query: 1016 HKAGCAAAISNG-SSLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSD 1192
                     SNG + L FGI++ H C VVTARARSFLYHQVRLLVGVLKCVGTGEL+ SD
Sbjct: 280  FSNSDDEVGSNGITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTTSD 339

Query: 1193 AQRILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
             +RIL+AKTVTAA PMAPA GLYLG V+YDLP
Sbjct: 340  VERILNAKTVTAASPMAPAYGLYLGCVKYDLP 371


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  457 bits (1177), Expect = e-126
 Identities = 226/330 (68%), Positives = 262/330 (79%), Gaps = 8/330 (2%)
 Frame = +2

Query: 323  EKQMMNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSR 502
            E    NPR G+QRYLVAIEY GT F GSQ+Q   +TVVG LEEAF KF+GQPV + CSSR
Sbjct: 38   EGMSQNPRNGIQRYLVAIEYIGTLFSGSQKQLNVRTVVGALEEAFSKFVGQPVSVSCSSR 97

Query: 503  TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIP 682
            TDAGVHALSNVCHVD++RISKR+PGEVLPPHEP+ V RA+NHFLQK D D+MV DVRC+P
Sbjct: 98   TDAGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDSDLMVIDVRCVP 157

Query: 683  SDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSS 862
            SDFHAR+KA ERTY+YRLL GP+P+S FEKDRAWHVPEE++L AMQEAC+VLVGCHDFSS
Sbjct: 158  SDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHDFSS 217

Query: 863  FRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWN-FDGDKISTSFDGH------- 1018
            FRA+GCQAKSP+RTLDEL V+E + +PY PS +  EQ N   GD  S S +         
Sbjct: 218  FRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSNNTETDIPPIS 277

Query: 1019 KAGCAAAISNGSSLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQ 1198
                   I++     FG ++ HRCLVVTARARSFLYHQVRLLVGVLK  GTG L++ D +
Sbjct: 278  NPSIDKVITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPDVE 337

Query: 1199 RILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
            RIL+AKTVTAA PMAPACGLYLG+V+YDLP
Sbjct: 338  RILNAKTVTAASPMAPACGLYLGEVKYDLP 367


>gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  456 bits (1172), Expect = e-125
 Identities = 233/332 (70%), Positives = 264/332 (79%), Gaps = 10/332 (3%)
 Frame = +2

Query: 323  EKQMMNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSR 502
            ++  M+  P +QRYLVAIEY GTRF GSQQQP C+TVVGVLEEAF KFIGQPV IFCSSR
Sbjct: 40   QESSMSKNPRIQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSR 99

Query: 503  TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIP 682
            TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPS V+RA+NHFLQ +  D+ V DVRC+P
Sbjct: 100  TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQSEG-DITVIDVRCVP 158

Query: 683  SDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSS 862
            +DFHARYKA ERTY+YRLL G +P+S FEK+RAWHVPE+++L AMQEACKVLVG HDFSS
Sbjct: 159  NDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVGHHDFSS 218

Query: 863  FRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNFDGD---------KISTSFDG 1015
            FRA+GCQAKSP+RTLDEL VSE+  TPY PS    +Q N   +         +I    D 
Sbjct: 219  FRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEIDLPIDS 278

Query: 1016 HKAGCAAAISNG-SSLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSD 1192
                     SNG + L FGI++ H C VVTARARSFLYHQVRLLVGVLKCVGTGEL+ SD
Sbjct: 279  FSNSDDEVGSNGITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTTSD 338

Query: 1193 AQRILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
             +RIL+AKTVTAA PMAPA GLYLG V+YDLP
Sbjct: 339  VERILNAKTVTAASPMAPAYGLYLGCVKYDLP 370


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  455 bits (1171), Expect = e-125
 Identities = 220/322 (68%), Positives = 258/322 (80%)
 Frame = +2

Query: 323  EKQMMNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSR 502
            E + MNP+PG+QRYLVA+EY GTRF+GSQQQP C+TVVG LEEAF+KFIGQPV +FCSSR
Sbjct: 37   EAETMNPKPGIQRYLVAVEYIGTRFYGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSR 96

Query: 503  TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIP 682
            TDAGVHALSNVCHVDVERISKRKPGEVLPPHEP  V +A+NHFLQK + DV V DVR +P
Sbjct: 97   TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVP 156

Query: 683  SDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSS 862
            +DFHARYKA ERTY+YRL+ GP+ +S FEKDRAWHVPE +N+ AMQEACKVLVG HDFSS
Sbjct: 157  NDFHARYKAQERTYFYRLVSGPEALSSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSS 216

Query: 863  FRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNFDGDKISTSFDGHKAGCAAAI 1042
            FRA+GCQA SP+RTLDEL V E  STPY P+ +  +Q               ++      
Sbjct: 217  FRAAGCQANSPIRTLDELNVCEVASTPYFPTSMERKQRQ----------GKEESEIEVPC 266

Query: 1043 SNGSSLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQRILDAKTV 1222
            S    + FGI++ HRC VVTARARSFLYHQVRL+VGVLK VG+G+L+V D  RIL+AK V
Sbjct: 267  SETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGSGDLTVGDVGRILEAKNV 326

Query: 1223 TAAKPMAPACGLYLGQVRYDLP 1288
            ++A+PMAPACGLYLG V+YDLP
Sbjct: 327  SSARPMAPACGLYLGHVKYDLP 348


>ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
            gi|557095305|gb|ESQ35887.1| hypothetical protein
            EUTSA_v10007981mg [Eutrema salsugineum]
          Length = 368

 Score =  453 bits (1165), Expect = e-125
 Identities = 227/319 (71%), Positives = 262/319 (82%), Gaps = 1/319 (0%)
 Frame = +2

Query: 335  MNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSRTDAG 514
            MNPR  +QRYLVAIEY GTRF GSQQQ T +TVVGVL+EAF KFIGQPV IFCSSRTDAG
Sbjct: 54   MNPR--VQRYLVAIEYIGTRFSGSQQQATDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAG 111

Query: 515  VHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIPSDFH 694
            VHALSNVCHVDVERISKRKPGEVLPPHEP  V+RA+NHFLQ++D DVMV DVRC+PS++H
Sbjct: 112  VHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDGDVMVIDVRCVPSNYH 171

Query: 695  ARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSSFRAS 874
            ARYKA ERTY+YRLL G DP+SI EKDRAWHVPEE++L +MQEAC+VLVG HDFSSFRA+
Sbjct: 172  ARYKARERTYFYRLLSGSDPLSILEKDRAWHVPEELDLRSMQEACRVLVGTHDFSSFRAA 231

Query: 875  GCQAKSPVRTLDELRVSESVSTPYIPS-PLGSEQWNFDGDKISTSFDGHKAGCAAAISNG 1051
            GCQAKSP+R+LDEL V+E  STPY PS    +  +  +GD ++ S         A +S  
Sbjct: 232  GCQAKSPIRSLDELNVTEVPSTPYFPSITERTPSYLNNGDPLACSSQAKTE--TAGVSTD 289

Query: 1052 SSLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQRILDAKTVTAA 1231
                FG+++ HRC VVTAR R+FLYHQVRLLV  LKCVGTGEL+VSD +RIL AKTVTAA
Sbjct: 290  GGDTFGVRRRHRCYVVTARGRAFLYHQVRLLVAALKCVGTGELTVSDVERILKAKTVTAA 349

Query: 1232 KPMAPACGLYLGQVRYDLP 1288
            KPMAPACGLYL +V+Y+ P
Sbjct: 350  KPMAPACGLYLARVKYEFP 368


>gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  450 bits (1157), Expect = e-124
 Identities = 225/335 (67%), Positives = 264/335 (78%), Gaps = 13/335 (3%)
 Frame = +2

Query: 323  EKQM-MNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSS 499
            EK+M  NPR G+QRY +AIEY GTRF GSQ+Q TC+TVVG LEEAF KF+G PV + CSS
Sbjct: 41   EKEMTQNPRNGIQRYFLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPVSVSCSS 100

Query: 500  RTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCI 679
            RTDAGVHALSNVCHVD++R SKRKPGEVLPPHEP+ V RA+NHFLQK D D+ V DVRC+
Sbjct: 101  RTDAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQKHDSDLTVIDVRCV 160

Query: 680  PSDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFS 859
            PSDFHARYKALERTY+YRLL GP+P+S FEKDRAWHV EE+NL AMQEAC+VLVG HDFS
Sbjct: 161  PSDFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHDFS 220

Query: 860  SFRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNFDGDKIS-----------TS 1006
            SFRA+GCQAKSP+RTLDEL VSE + + + PS +  E      DK+S           T 
Sbjct: 221  SFRAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDRE----GHDKVSSDPRSYPSNSETD 276

Query: 1007 FDGHKAGCAAAISNGS-SLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELS 1183
                 + C   ++  S  + FG ++ HRCLVVTARARSFLYHQVRLLVGVLK VGTG L+
Sbjct: 277  IPPSSSPCIDKVTTSSEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLT 336

Query: 1184 VSDAQRILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
            + D +RIL+AK+VT+A PMAPACGLYLG+V+YDLP
Sbjct: 337  IPDVERILNAKSVTSASPMAPACGLYLGEVKYDLP 371


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
            gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  448 bits (1153), Expect = e-123
 Identities = 221/330 (66%), Positives = 263/330 (79%), Gaps = 8/330 (2%)
 Frame = +2

Query: 323  EKQMMNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSR 502
            E+ + NPR G+QRYLVAIEY GTRF GSQ+Q   +TVVGVLEEAF KF+GQPV + CSSR
Sbjct: 39   EEMIKNPRNGIQRYLVAIEYIGTRFSGSQKQLNVRTVVGVLEEAFSKFVGQPVSVSCSSR 98

Query: 503  TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIP 682
            T AGVHALSNVCHVD++RISKR+PGEVL PHEP+ V RA+NHFLQK D D+MV DVRC+P
Sbjct: 99   TVAGVHALSNVCHVDIQRISKRRPGEVLTPHEPAVVGRAVNHFLQKQDSDLMVIDVRCVP 158

Query: 683  SDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSS 862
            SDFHAR+KA ER Y+YRLL GP+P+S FEKDRAWHVPEE++L AMQEAC+VLVG HDFSS
Sbjct: 159  SDFHARFKAQERIYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGFHDFSS 218

Query: 863  FRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWN-FDGDKISTSFDGH------- 1018
            FRA+GCQAKSP+RTLDEL V+E + +PY PS +  EQ N   GD  S   +         
Sbjct: 219  FRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIPPTS 278

Query: 1019 KAGCAAAISNGSSLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQ 1198
                   +++   + FG ++ HRCLVVTARAR+FLYHQVRLLVGVLK VGTG L++ D +
Sbjct: 279  NPSIDKVMASSQDVGFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVE 338

Query: 1199 RILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
            RIL+A+TVTAA PMAPACGLYLG+V+YDLP
Sbjct: 339  RILNARTVTAASPMAPACGLYLGEVKYDLP 368


>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
            arietinum]
          Length = 374

 Score =  447 bits (1150), Expect = e-123
 Identities = 225/334 (67%), Positives = 262/334 (78%), Gaps = 12/334 (3%)
 Frame = +2

Query: 323  EKQMMNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSR 502
            +K+ MN    +QRYLVAIEY GT F GSQ+Q T +TVVGVLEEAF KF+GQPV + CSSR
Sbjct: 44   QKEGMNQHRRIQRYLVAIEYIGTHFSGSQKQLTDRTVVGVLEEAFCKFVGQPVSVICSSR 103

Query: 503  TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIP 682
            TDAGVHALSNVCHVD+ERISKRKPGEVLPPHEP  V+RA+NHFLQK + D+MV DVRC+P
Sbjct: 104  TDAGVHALSNVCHVDIERISKRKPGEVLPPHEPVVVRRAVNHFLQKQNGDLMVIDVRCVP 163

Query: 683  SDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSS 862
            SDFHARYKA ERTY+YRLL G +P+S  EKDRAWHVPEE+NL AMQEAC+VLVG HDFSS
Sbjct: 164  SDFHARYKAQERTYFYRLLSGSEPLSTLEKDRAWHVPEELNLPAMQEACRVLVGHHDFSS 223

Query: 863  FRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNFDGDKISTSFDGHKAGCAAAI 1042
            FRA+GCQAKSP+RTLDEL V E + +PY PS +  E+      K++    G  +   A I
Sbjct: 224  FRAAGCQAKSPIRTLDELSVVEVIQSPYFPSVMDRER----QIKVADDLHGCGSNAEAVI 279

Query: 1043 SNGSSLQ------------FGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSV 1186
               SS +            FG ++ HRCLVVTARAR+FLYHQVRLLVGVLK VGTG L++
Sbjct: 280  PVSSSARIDKVRASNEGVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTI 339

Query: 1187 SDAQRILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
             D +RIL+AKTVTAA PMAPACGLYLG+V+YDLP
Sbjct: 340  PDVERILNAKTVTAASPMAPACGLYLGEVKYDLP 373


>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 389

 Score =  447 bits (1150), Expect = e-123
 Identities = 233/388 (60%), Positives = 279/388 (71%), Gaps = 17/388 (4%)
 Frame = +2

Query: 176  SKLNREHNSHSPQRPPKVARSLGEDPRHVYDDXXXXXXXXXXXXXXXIAEKQMMNPRPGL 355
            +K + +    SPQRP K+ +   +    V +                 +  + MNP P L
Sbjct: 14   NKHSLDQRPESPQRPSKLPKVNDDGGNDVVEGEEQKE-----------SVTRTMNPNPRL 62

Query: 356  QRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSRTDAGVHALSNV 535
            QRYL+AIEY GTRF G+QQQP C+TVVGVL+EAF+KFIGQPV +FCSSRTDAGVHALSNV
Sbjct: 63   QRYLLAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFIGQPVSVFCSSRTDAGVHALSNV 122

Query: 536  CHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIPSDFHARYKALE 715
            CHVDVERISKRKPG+VLPPHEP  VKRA+NHFLQK+  D+MV DVRC+P DFHARYKA E
Sbjct: 123  CHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNAGDIMVIDVRCVPDDFHARYKAQE 182

Query: 716  RTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSSFRASGCQAKSP 895
            RTY+YRLL GP+PVS FE+DRAWHVPE ++L AMQ+AC +L+G HDFSSFRA+ CQA SP
Sbjct: 183  RTYFYRLLSGPEPVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRAAACQANSP 242

Query: 896  VRTLDELRVSESVSTPYIPS----------------PLGSEQWNFDGDKISTSFDGHKAG 1027
            +RTLDEL V E VSTP+ PS                 LGS     D +    SF+ ++  
Sbjct: 243  IRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVYLGS-----DTNHSQISFNTNEGK 297

Query: 1028 CAAAISNGSSLQ-FGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQRI 1204
                 SNG + Q FG+++ HRC VVTARARSFLYHQVRLLVGVLK VG G+L+  D +RI
Sbjct: 298  LEG--SNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGDLTDPDVKRI 355

Query: 1205 LDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
            L+AK++ AA PMAPACGLYLG V+YDLP
Sbjct: 356  LEAKSIAAAPPMAPACGLYLGHVKYDLP 383


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
            tuberosum]
          Length = 389

 Score =  447 bits (1149), Expect = e-123
 Identities = 234/388 (60%), Positives = 280/388 (72%), Gaps = 17/388 (4%)
 Frame = +2

Query: 176  SKLNREHNSHSPQRP---PKVARSLGEDPRHVYDDXXXXXXXXXXXXXXXIAEKQMMNPR 346
            +K + +    SPQRP   PKV    G D     +                 +  + MNP 
Sbjct: 14   NKHSLDQRPESPQRPSKFPKVNDDAGNDVLEGEEQKE--------------SVTRTMNPN 59

Query: 347  PGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSRTDAGVHAL 526
            P LQRYL+AIEY GTRF G+QQQP C+TVVGVL+EAF+KF+GQPV +FCSSRTDAGVHAL
Sbjct: 60   PRLQRYLIAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFVGQPVSVFCSSRTDAGVHAL 119

Query: 527  SNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIPSDFHARYK 706
            SNVCHVDVERISKRKPG+VLPPHEP  VKRA+NHFLQK++ D+MV DVRC+P+DFHARYK
Sbjct: 120  SNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNEGDIMVIDVRCVPADFHARYK 179

Query: 707  ALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSSFRASGCQA 886
            A ERTY+YRLL GP+ VS FE+DRAWHVPE ++L AMQ+AC +L+G HDFSSFRA+ CQA
Sbjct: 180  AQERTYFYRLLSGPESVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRAAACQA 239

Query: 887  KSPVRTLDELRVSESVSTPYIPS-------------PLGSEQWNFDGDKISTSFDGHKAG 1027
             SP+RTLDEL V E VSTP+ PS             P  S   + +  +IS + +  K  
Sbjct: 240  NSPIRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVSLGSDTNHSQISLNTNEEK-- 297

Query: 1028 CAAAISNGSSLQ-FGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQRI 1204
                 SNG + Q FG+++ HRC VVTARARSFLYHQVRLLVGVLK VG G L+  D +RI
Sbjct: 298  --LEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGVLTDPDVKRI 355

Query: 1205 LDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
            L+AK++TAA PMAPACGLYLG V+YDLP
Sbjct: 356  LEAKSITAAPPMAPACGLYLGHVKYDLP 383


>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
            gi|332190374|gb|AEE28495.1| pseudouridine synthase family
            protein [Arabidopsis thaliana]
          Length = 372

 Score =  446 bits (1146), Expect = e-122
 Identities = 227/333 (68%), Positives = 266/333 (79%), Gaps = 9/333 (2%)
 Frame = +2

Query: 317  IAEKQMMNP-RPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFC 493
            +A+ + MNP  P +QRYLVAIEY GTRF GSQQQ   +TVVGVL+EAF KFIGQPV IFC
Sbjct: 41   LADLESMNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFC 100

Query: 494  SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVR 673
            SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEP  V+RA+NHFLQ+ D DVMV DVR
Sbjct: 101  SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVR 160

Query: 674  CIPSDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHD 853
            C+PS++HARYKA ERTY+YRLL G DP+SI EKDR WHVPEE+NL  MQEAC+VLVG HD
Sbjct: 161  CVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHD 220

Query: 854  FSSFRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNF-DGDKISTSFDGHKAGC 1030
            FSSFRA+GCQAKSP+R+LDEL ++E  STPY PS       N  +GD ++ S +  K+  
Sbjct: 221  FSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACS-NQPKSET 279

Query: 1031 AAAISNGSSLQ-------FGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVS 1189
            A   +N   ++       FG ++ HRC VVTAR+R FLYHQVRL+VG LKCVGTGEL+VS
Sbjct: 280  AGVTTNVGEVEGSTEGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVS 339

Query: 1190 DAQRILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
            D +RIL+AKTV+AAKPMAPA GLYL +VRY+ P
Sbjct: 340  DVERILEAKTVSAAKPMAPASGLYLARVRYEFP 372


>dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana]
            gi|51971573|dbj|BAD44451.1| unnamed protein product
            [Arabidopsis thaliana]
          Length = 368

 Score =  446 bits (1146), Expect = e-122
 Identities = 227/333 (68%), Positives = 266/333 (79%), Gaps = 9/333 (2%)
 Frame = +2

Query: 317  IAEKQMMNP-RPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFC 493
            +A+ + MNP  P +QRYLVAIEY GTRF GSQQQ   +TVVGVL+EAF KFIGQPV IFC
Sbjct: 37   LADLESMNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFC 96

Query: 494  SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVR 673
            SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEP  V+RA+NHFLQ+ D DVMV DVR
Sbjct: 97   SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVR 156

Query: 674  CIPSDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHD 853
            C+PS++HARYKA ERTY+YRLL G DP+SI EKDR WHVPEE+NL  MQEAC+VLVG HD
Sbjct: 157  CVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHD 216

Query: 854  FSSFRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNF-DGDKISTSFDGHKAGC 1030
            FSSFRA+GCQAKSP+R+LDEL ++E  STPY PS       N  +GD ++ S +  K+  
Sbjct: 217  FSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACS-NQPKSET 275

Query: 1031 AAAISNGSSLQ-------FGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVS 1189
            A   +N   ++       FG ++ HRC VVTAR+R FLYHQVRL+VG LKCVGTGEL+VS
Sbjct: 276  AGVTTNVGEVEGSTGGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVS 335

Query: 1190 DAQRILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
            D +RIL+AKTV+AAKPMAPA GLYL +VRY+ P
Sbjct: 336  DVERILEAKTVSAAKPMAPASGLYLARVRYEFP 368


>gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]
          Length = 372

 Score =  446 bits (1146), Expect = e-122
 Identities = 227/333 (68%), Positives = 266/333 (79%), Gaps = 9/333 (2%)
 Frame = +2

Query: 317  IAEKQMMNP-RPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFC 493
            +A+ + MNP  P +QRYLVAIEY GTRF GSQQQ   +TVVGVL+EAF KFIGQPV IFC
Sbjct: 41   LADLESMNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFC 100

Query: 494  SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVR 673
            SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEP  V+RA+NHFLQ+ D DVMV DVR
Sbjct: 101  SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVR 160

Query: 674  CIPSDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHD 853
            C+PS++HARYKA ERTY+YRLL G DP+SI EKDR WHVPEE+NL  MQEAC+VLVG HD
Sbjct: 161  CVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHD 220

Query: 854  FSSFRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNF-DGDKISTSFDGHKAGC 1030
            FSSFRA+GCQAKSP+R+LDEL ++E  STPY PS       N  +GD ++ S +  K+  
Sbjct: 221  FSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACS-NQPKSET 279

Query: 1031 AAAISNGSSLQ-------FGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVS 1189
            A   +N   ++       FG ++ HRC VVTAR+R FLYHQVRL+VG LKCVGTGEL+VS
Sbjct: 280  AGVTTNVGEVEGSTGGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVS 339

Query: 1190 DAQRILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
            D +RIL+AKTV+AAKPMAPA GLYL +VRY+ P
Sbjct: 340  DVERILEAKTVSAAKPMAPASGLYLARVRYEFP 372


>ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X1 [Citrus
            sinensis]
          Length = 383

 Score =  445 bits (1144), Expect = e-122
 Identities = 225/320 (70%), Positives = 258/320 (80%)
 Frame = +2

Query: 329  QMMNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSRTD 508
            ++M+    +QRYL+A+EY GTRF GSQ+Q  C+TVVGVLEEAF KFIGQPV I  SSRTD
Sbjct: 49   EVMSTNKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTD 108

Query: 509  AGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIPSD 688
            AGVHA SNVCHVDVERISKRKPGEVLPPH+ S V+RA+NHFLQK + D+MVTDVRC+PSD
Sbjct: 109  AGVHAASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQKSEGDIMVTDVRCVPSD 168

Query: 689  FHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSSFR 868
            FHAR++A ERTY+YR+L GP+P+S+FEKDRAWHV EE++L AMQEACKVLVGCHDFSSFR
Sbjct: 169  FHARFRAQERTYFYRILSGPEPLSVFEKDRAWHVTEELDLRAMQEACKVLVGCHDFSSFR 228

Query: 869  ASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNFDGDKISTSFDGHKAGCAAAISN 1048
            ASGCQA SP+RTLDEL VSE VST   PS       N D   +S+  +  K G    + N
Sbjct: 229  ASGCQANSPIRTLDELHVSEVVSTALFPS------INQDSPVLSSIDNSSKLG----MPN 278

Query: 1049 GSSLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQRILDAKTVTA 1228
            G S  FGI+K HR   V ARARSFLYHQVRL+VGVLK VGTGEL+VSD +RIL AKTVTA
Sbjct: 279  GGSNVFGIRKKHRSYEVIARARSFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKTVTA 338

Query: 1229 AKPMAPACGLYLGQVRYDLP 1288
            A PMAPACGL LG V+YDLP
Sbjct: 339  ASPMAPACGLSLGFVKYDLP 358


>gb|ESW20554.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 372

 Score =  444 bits (1141), Expect = e-122
 Identities = 224/335 (66%), Positives = 263/335 (78%), Gaps = 13/335 (3%)
 Frame = +2

Query: 323  EKQM-MNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSS 499
            EK+M  NPR G+QRY +AIEY GTRF GSQ+Q TC+TVVG LEEAF KF+G PV + CSS
Sbjct: 41   EKEMTQNPRNGIQRYFLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPVSVSCSS 100

Query: 500  RTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCI 679
            RTDAGVHALSNVCHVD++R SKRKPGEVLPPHEP+ V RA+NHFLQ D  D+ V DVRC+
Sbjct: 101  RTDAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQHDS-DLTVIDVRCV 159

Query: 680  PSDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFS 859
            PSDFHARYKALERTY+YRLL GP+P+S FEKDRAWHV EE+NL AMQEAC+VLVG HDFS
Sbjct: 160  PSDFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHDFS 219

Query: 860  SFRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNFDGDKIS-----------TS 1006
            SFRA+GCQAKSP+RTLDEL VSE + + + PS +  E      DK+S           T 
Sbjct: 220  SFRAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDRE----GHDKVSSDPRSYPSNSETD 275

Query: 1007 FDGHKAGCAAAISNGS-SLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELS 1183
                 + C   ++  S  + FG ++ HRCLVVTARARSFLYHQVRLLVGVLK VGTG L+
Sbjct: 276  IPPSSSPCIDKVTTSSEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLT 335

Query: 1184 VSDAQRILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
            + D +RIL+AK+VT+A PMAPACGLYLG+V+YDLP
Sbjct: 336  IPDVERILNAKSVTSASPMAPACGLYLGEVKYDLP 370


>ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arabidopsis lyrata subsp.
            lyrata] gi|297338368|gb|EFH68785.1| hypothetical protein
            ARALYDRAFT_471082 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  442 bits (1136), Expect = e-121
 Identities = 224/334 (67%), Positives = 266/334 (79%), Gaps = 10/334 (2%)
 Frame = +2

Query: 317  IAEKQMMNP-RPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFC 493
            +A+ + MNP  P +QRYLVAIEY GTRF GSQQQ   +TVVGVL++AF KFIGQPV IFC
Sbjct: 42   LADSESMNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQDAFHKFIGQPVKIFC 101

Query: 494  SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVR 673
            SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEP  V+RA+NHFLQ+ D DVMV DVR
Sbjct: 102  SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVR 161

Query: 674  CIPSDFHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHD 853
            C+PS++HARYKA ERTY+YRLL G DP+SI EKDR WHVPEE+N  +MQEAC+VLVG HD
Sbjct: 162  CVPSNYHARYKAQERTYFYRLLAGSDPLSILEKDRCWHVPEELNPRSMQEACRVLVGYHD 221

Query: 854  FSSFRASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWN--FDGDKISTSFDGHKAG 1027
            FSSFRA+GCQAKSP+R LDEL ++E  STPY PS +    W+   +GD ++ S    K+ 
Sbjct: 222  FSSFRAAGCQAKSPMRYLDELNITEVPSTPYFPS-ITERAWSNLNNGDPLACS-SQPKSE 279

Query: 1028 CAAAISNGSSLQ-------FGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSV 1186
             A   +N   ++       FG ++ HRC VVTAR+R FLYHQVRL+VG LKCVGTGEL+V
Sbjct: 280  TAGVTTNVGEVEGSTDGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTV 339

Query: 1187 SDAQRILDAKTVTAAKPMAPACGLYLGQVRYDLP 1288
            SD +RIL+AKTV+AAKPMAPA GLYL +V+Y+ P
Sbjct: 340  SDVERILEAKTVSAAKPMAPASGLYLARVKYEFP 373


>ref|XP_006305124.1| hypothetical protein CARUB_v10009493mg [Capsella rubella]
            gi|482573835|gb|EOA38022.1| hypothetical protein
            CARUB_v10009493mg [Capsella rubella]
          Length = 370

 Score =  441 bits (1134), Expect = e-121
 Identities = 225/326 (69%), Positives = 260/326 (79%), Gaps = 8/326 (2%)
 Frame = +2

Query: 335  MNP-RPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSRTDA 511
            MNP  P LQRYLVAIEY GTRF GSQQQ T +TVVGVL+EAF KFIGQPV IFCSSRTDA
Sbjct: 46   MNPGNPRLQRYLVAIEYIGTRFSGSQQQATDRTVVGVLQEAFHKFIGQPVKIFCSSRTDA 105

Query: 512  GVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIPSDF 691
            GVHALSNVCHVDVERISKRKPGEVLPPHEP  V++A+NHFLQ+ D DVMV DVRC+PS++
Sbjct: 106  GVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQKAVNHFLQRKDGDVMVIDVRCVPSNY 165

Query: 692  HARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSSFRA 871
            HARYKA ERTY+YR+L G DP+SI EKDR WHVPEE+NL +MQEACKVLVG HDFSSFRA
Sbjct: 166  HARYKARERTYFYRILSGSDPLSILEKDRCWHVPEELNLRSMQEACKVLVGTHDFSSFRA 225

Query: 872  SGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNFDGDKISTSFDGHKAGCAAAISNG 1051
            +GCQAKS +R+LDEL V+E  STPY PS         +GD  + S   HK   A   +N 
Sbjct: 226  AGCQAKSAMRSLDELSVTEVPSTPYFPSITERASNLNNGDPFACS-SQHKTETAGVGTNV 284

Query: 1052 SSLQ-------FGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQRILD 1210
              ++       FG ++ HRC VVTAR+R FLYHQVRLLVGVLK VGTGEL+V+D +RIL+
Sbjct: 285  GEVEGSTDGDSFGARRRHRCYVVTARSRGFLYHQVRLLVGVLKSVGTGELTVADVERILE 344

Query: 1211 AKTVTAAKPMAPACGLYLGQVRYDLP 1288
            AKTV+A+KPMAPA GLYL +V+Y+ P
Sbjct: 345  AKTVSASKPMAPASGLYLARVKYEFP 370


>ref|XP_006471141.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X2 [Citrus
            sinensis]
          Length = 382

 Score =  439 bits (1128), Expect = e-120
 Identities = 224/320 (70%), Positives = 257/320 (80%)
 Frame = +2

Query: 329  QMMNPRPGLQRYLVAIEYNGTRFFGSQQQPTCKTVVGVLEEAFKKFIGQPVFIFCSSRTD 508
            ++M+    +QRYL+A+EY GTRF GSQ+Q  C+TVVGVLEEAF KFIGQPV I  SSRTD
Sbjct: 49   EVMSTNKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTD 108

Query: 509  AGVHALSNVCHVDVERISKRKPGEVLPPHEPSTVKRALNHFLQKDDHDVMVTDVRCIPSD 688
            AGVHA SNVCHVDVERISKRKPGEVLPPH+ S V+RA+NHFLQ +  D+MVTDVRC+PSD
Sbjct: 109  AGVHAASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQSEG-DIMVTDVRCVPSD 167

Query: 689  FHARYKALERTYYYRLLCGPDPVSIFEKDRAWHVPEEMNLDAMQEACKVLVGCHDFSSFR 868
            FHAR++A ERTY+YR+L GP+P+S+FEKDRAWHV EE++L AMQEACKVLVGCHDFSSFR
Sbjct: 168  FHARFRAQERTYFYRILSGPEPLSVFEKDRAWHVTEELDLRAMQEACKVLVGCHDFSSFR 227

Query: 869  ASGCQAKSPVRTLDELRVSESVSTPYIPSPLGSEQWNFDGDKISTSFDGHKAGCAAAISN 1048
            ASGCQA SP+RTLDEL VSE VST   PS       N D   +S+  +  K G    + N
Sbjct: 228  ASGCQANSPIRTLDELHVSEVVSTALFPS------INQDSPVLSSIDNSSKLG----MPN 277

Query: 1049 GSSLQFGIKKLHRCLVVTARARSFLYHQVRLLVGVLKCVGTGELSVSDAQRILDAKTVTA 1228
            G S  FGI+K HR   V ARARSFLYHQVRL+VGVLK VGTGEL+VSD +RIL AKTVTA
Sbjct: 278  GGSNVFGIRKKHRSYEVIARARSFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKTVTA 337

Query: 1229 AKPMAPACGLYLGQVRYDLP 1288
            A PMAPACGL LG V+YDLP
Sbjct: 338  ASPMAPACGLSLGFVKYDLP 357