BLASTX nr result
ID: Rheum21_contig00018081
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00018081
(401 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ24475.1| hypothetical protein PRUPE_ppa007259mg [Prunus pe... 73 3e-11
ref|XP_006402055.1| hypothetical protein EUTSA_v10013888mg [Eutr... 73 3e-11
ref|XP_006282414.1| hypothetical protein CARUB_v100266331mg, par... 73 4e-11
ref|XP_002864080.1| pyruvate dehydrogenase E1 component beta sub... 72 1e-10
gb|EXB40354.1| hypothetical protein L484_017496 [Morus notabilis] 70 4e-10
ref|XP_006366909.1| PREDICTED: pyruvate dehydrogenase E1 compone... 69 6e-10
ref|XP_004235365.1| PREDICTED: pyruvate dehydrogenase E1 compone... 69 6e-10
ref|XP_004140550.1| PREDICTED: pyruvate dehydrogenase E1 compone... 69 8e-10
ref|XP_004166951.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate deh... 68 1e-09
ref|XP_006438829.1| hypothetical protein CICLE_v10031662mg [Citr... 67 2e-09
gb|AAA52225.1| pyruvate dehydrogenase E1 beta subunit [Arabidops... 67 2e-09
ref|NP_199898.1| pyruvate dehydrogenase E1 beta [Arabidopsis tha... 67 2e-09
ref|XP_006483030.1| PREDICTED: pyruvate dehydrogenase E1 compone... 67 3e-09
ref|XP_006844564.1| hypothetical protein AMTR_s00016p00190930 [A... 66 4e-09
ref|XP_002460498.1| hypothetical protein SORBIDRAFT_02g029470 [S... 66 4e-09
ref|XP_002512633.1| pyruvate dehydrogenase, putative [Ricinus co... 66 4e-09
ref|XP_002304661.2| pyruvate dehydrogenase family protein [Popul... 66 4e-09
ref|XP_004310117.1| PREDICTED: pyruvate dehydrogenase E1 compone... 66 5e-09
ref|XP_004241456.1| PREDICTED: pyruvate dehydrogenase E1 compone... 66 5e-09
ref|XP_002280637.1| PREDICTED: pyruvate dehydrogenase E1 compone... 66 5e-09
>gb|EMJ24475.1| hypothetical protein PRUPE_ppa007259mg [Prunus persica]
Length = 376
Score = 73.2 bits (178), Expect = 3e-11
Identities = 43/72 (59%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Frame = +2
Query: 206 MSRIMMQKVAGG-------GVSSSRFWRLHQAARAFSSGGKEMNVRDALNSALDEEMAAD 364
M I+ QKV G G S R A RAFSS KEM VRDALNSALDEEM+AD
Sbjct: 1 MLGILRQKVGAGSSSAMILGQSMQRIRPTTSALRAFSSSAKEMTVRDALNSALDEEMSAD 60
Query: 365 SKVFIMGEEVGE 400
KVF+MGEEVGE
Sbjct: 61 PKVFLMGEEVGE 72
>ref|XP_006402055.1| hypothetical protein EUTSA_v10013888mg [Eutrema salsugineum]
gi|312282681|dbj|BAJ34206.1| unnamed protein product
[Thellungiella halophila] gi|557103145|gb|ESQ43508.1|
hypothetical protein EUTSA_v10013888mg [Eutrema
salsugineum]
Length = 366
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 3/65 (4%)
Frame = +2
Query: 215 IMMQKVAGGGVSSSRFWRLHQA---ARAFSSGGKEMNVRDALNSALDEEMAADSKVFIMG 385
I+ Q+ GG S+S R A AR++++G KEM VRDALNSA+DEEM+AD KVF+MG
Sbjct: 4 ILRQRAVDGGFSASSLRRTRSALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVMG 63
Query: 386 EEVGE 400
EEVG+
Sbjct: 64 EEVGQ 68
>ref|XP_006282414.1| hypothetical protein CARUB_v100266331mg, partial [Capsella rubella]
gi|482551118|gb|EOA15312.1| hypothetical protein
CARUB_v100266331mg, partial [Capsella rubella]
Length = 350
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Frame = +2
Query: 206 MSRIMMQKVAGGGVSSSRFWRLHQA---ARAFSSGGKEMNVRDALNSALDEEMAADSKVF 376
M I+ Q+ GG+++S R A AR++++G KEM VRDALNSA+DEEM+AD KVF
Sbjct: 1 MLGILRQRAIDGGLAASTLRRTRSALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVF 60
Query: 377 IMGEEVGE 400
+MGEEVG+
Sbjct: 61 VMGEEVGQ 68
>ref|XP_002864080.1| pyruvate dehydrogenase E1 component beta subunit, mitochondrial
[Arabidopsis lyrata subsp. lyrata]
gi|297309915|gb|EFH40339.1| pyruvate dehydrogenase E1
component beta subunit, mitochondrial [Arabidopsis
lyrata subsp. lyrata]
Length = 366
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Frame = +2
Query: 206 MSRIMMQKVAGGGVSSSRFWRLHQA---ARAFSSGGKEMNVRDALNSALDEEMAADSKVF 376
M I+ Q+ GG+++S R A AR++++G KEM VRDALNSA+DEEM+AD KVF
Sbjct: 1 MLGILRQRAIDGGLAASTLRRTRFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVF 60
Query: 377 IMGEEVGE 400
+MGEEVG+
Sbjct: 61 VMGEEVGQ 68
>gb|EXB40354.1| hypothetical protein L484_017496 [Morus notabilis]
Length = 294
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Frame = +2
Query: 215 IMMQKVAGGGVSSSRFWRLHQAARA---FSSGGKEMNVRDALNSALDEEMAADSKVFIMG 385
I+ QKV G S+ R+ A A +SS KEM VR+ALNSALDEEM+AD KVF+MG
Sbjct: 4 ILRQKVGAGSSSALSLQRIRPVASALRHYSSAAKEMTVREALNSALDEEMSADPKVFLMG 63
Query: 386 EEVGE 400
EEVGE
Sbjct: 64 EEVGE 68
>ref|XP_006366909.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1,
mitochondrial-like [Solanum tuberosum]
Length = 377
Score = 68.9 bits (167), Expect = 6e-10
Identities = 41/70 (58%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Frame = +2
Query: 206 MSRIMMQKVAGGGVSSSRFWRLHQ-----AARAFSSGGKEMNVRDALNSALDEEMAADSK 370
MS I+ +K+A G+S+ + A+R FSS KEM VRDALNSALDEEM+AD K
Sbjct: 1 MSGIINRKMATRGISALNMNQFLLGSRVFASRNFSSATKEMTVRDALNSALDEEMSADPK 60
Query: 371 VFIMGEEVGE 400
VFIMGEEVGE
Sbjct: 61 VFIMGEEVGE 70
>ref|XP_004235365.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta,
mitochondrial-like [Solanum lycopersicum]
Length = 377
Score = 68.9 bits (167), Expect = 6e-10
Identities = 41/70 (58%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Frame = +2
Query: 206 MSRIMMQKVAGGGVSSSRFWRLHQ-----AARAFSSGGKEMNVRDALNSALDEEMAADSK 370
MS I+ +K+A G+S+ + A+R FSS KEM VRDALNSALDEEM+AD K
Sbjct: 1 MSGIINRKMATRGISALNMNQFLLGSRVFASRNFSSATKEMTVRDALNSALDEEMSADPK 60
Query: 371 VFIMGEEVGE 400
VFIMGEEVGE
Sbjct: 61 VFIMGEEVGE 70
>ref|XP_004140550.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta,
mitochondrial-like [Cucumis sativus]
Length = 372
Score = 68.6 bits (166), Expect = 8e-10
Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +2
Query: 215 IMMQKVAGGGVSSSRFWRLHQAARA---FSSGGKEMNVRDALNSALDEEMAADSKVFIMG 385
I+ QKV G S L AA A +SS KEM VRDALNSALDEEM+ D KVF+MG
Sbjct: 4 IVRQKVGAGASSIPALQSLRPAASASRYYSSAAKEMTVRDALNSALDEEMSVDPKVFLMG 63
Query: 386 EEVGE 400
EEVGE
Sbjct: 64 EEVGE 68
>ref|XP_004166951.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component
subunit beta, mitochondrial-like [Cucumis sativus]
Length = 372
Score = 68.2 bits (165), Expect = 1e-09
Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +2
Query: 215 IMMQKVAGGGVSSSRFWRLHQAARA---FSSGGKEMNVRDALNSALDEEMAADSKVFIMG 385
I+ QKV G S L AA A +SS KEM VRDALNSALDEEM+AD K F+MG
Sbjct: 4 IVRQKVGAGASSIPALQSLRPAASASRYYSSAAKEMTVRDALNSALDEEMSADPKXFLMG 63
Query: 386 EEVGE 400
EEVGE
Sbjct: 64 EEVGE 68
>ref|XP_006438829.1| hypothetical protein CICLE_v10031662mg [Citrus clementina]
gi|557541025|gb|ESR52069.1| hypothetical protein
CICLE_v10031662mg [Citrus clementina]
Length = 416
Score = 67.4 bits (163), Expect = 2e-09
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = +2
Query: 203 RMSRIMMQKVA-GGGVSSSRFWRLHQAARAFSSGGKEMNVRDALNSALDEEMAADSKVFI 379
+M I+ QKVA GGG +R + R +SS K+M VR+ALNSALDEEM+AD KVF+
Sbjct: 46 KMWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFL 105
Query: 380 MGEEVGE 400
MGEEVGE
Sbjct: 106 MGEEVGE 112
>gb|AAA52225.1| pyruvate dehydrogenase E1 beta subunit [Arabidopsis thaliana]
gi|1090498|prf||2019230A pyruvate dehydrogenase
Length = 363
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +2
Query: 206 MSRIMMQKVAGGGVSSSRFWRLHQAARAFSSGGKEMNVRDALNSALDEEMAADSKVFIMG 385
M I+ Q+ G + R +AR++++G KEM VRDALNSA+DEEM+AD KVF+MG
Sbjct: 1 MLGILRQRAIDGASTLRRTRFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVMG 60
Query: 386 EEVGE 400
EEVG+
Sbjct: 61 EEVGQ 65
>ref|NP_199898.1| pyruvate dehydrogenase E1 beta [Arabidopsis thaliana]
gi|21431823|sp|Q38799.2|ODPB1_ARATH RecName:
Full=Pyruvate dehydrogenase E1 component subunit beta-1,
mitochondrial; Short=PDHE1-B; AltName: Full=Protein
MACCI-BOU; Flags: Precursor gi|8953766|dbj|BAA98121.1|
pyruvate dehydrogenase E1 component beta subunit,
mitochondrial precursor (PDHE1-B) [Arabidopsis thaliana]
gi|17979466|gb|AAL50070.1| AT5g50850/K16E14_1
[Arabidopsis thaliana] gi|23507745|gb|AAN38676.1|
At5g50850/K16E14_1 [Arabidopsis thaliana]
gi|332008618|gb|AED96001.1| pyruvate dehydrogenase E1
beta [Arabidopsis thaliana]
Length = 363
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +2
Query: 206 MSRIMMQKVAGGGVSSSRFWRLHQAARAFSSGGKEMNVRDALNSALDEEMAADSKVFIMG 385
M I+ Q+ G + R +AR++++G KEM VRDALNSA+DEEM+AD KVF+MG
Sbjct: 1 MLGILRQRAIDGASTLRRTRFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVMG 60
Query: 386 EEVGE 400
EEVG+
Sbjct: 61 EEVGQ 65
>ref|XP_006483030.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568859000|ref|XP_006483031.1| PREDICTED: pyruvate
dehydrogenase E1 component subunit beta-1,
mitochondrial-like isoform X2 [Citrus sinensis]
gi|568859002|ref|XP_006483032.1| PREDICTED: pyruvate
dehydrogenase E1 component subunit beta-1,
mitochondrial-like isoform X3 [Citrus sinensis]
gi|568859004|ref|XP_006483033.1| PREDICTED: pyruvate
dehydrogenase E1 component subunit beta-1,
mitochondrial-like isoform X4 [Citrus sinensis]
Length = 370
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/63 (60%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +2
Query: 215 IMMQKVA-GGGVSSSRFWRLHQAARAFSSGGKEMNVRDALNSALDEEMAADSKVFIMGEE 391
I+ QKVA GGG +R + R +SS K+M VR+ALNSALDEEM+AD KVF+MGEE
Sbjct: 4 IIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEE 63
Query: 392 VGE 400
VGE
Sbjct: 64 VGE 66
>ref|XP_006844564.1| hypothetical protein AMTR_s00016p00190930 [Amborella trichopoda]
gi|548847035|gb|ERN06239.1| hypothetical protein
AMTR_s00016p00190930 [Amborella trichopoda]
Length = 378
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +2
Query: 281 ARAFSSGGKEMNVRDALNSALDEEMAADSKVFIMGEEVGE 400
+++FSSG KEM VR+ALNSALDEEM+AD KVF+MGEEVGE
Sbjct: 35 SKSFSSGAKEMTVREALNSALDEEMSADPKVFLMGEEVGE 74
>ref|XP_002460498.1| hypothetical protein SORBIDRAFT_02g029470 [Sorghum bicolor]
gi|241923875|gb|EER97019.1| hypothetical protein
SORBIDRAFT_02g029470 [Sorghum bicolor]
Length = 375
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +2
Query: 275 QAARAFSSGGKEMNVRDALNSALDEEMAADSKVFIMGEEVGE 400
+ AR +S+ KEMNVRDALNSALDEEM+AD VF+MGEEVGE
Sbjct: 30 EVARGYSAAAKEMNVRDALNSALDEEMSADPSVFLMGEEVGE 71
>ref|XP_002512633.1| pyruvate dehydrogenase, putative [Ricinus communis]
gi|223548594|gb|EEF50085.1| pyruvate dehydrogenase,
putative [Ricinus communis]
Length = 368
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/65 (58%), Positives = 45/65 (69%)
Frame = +2
Query: 206 MSRIMMQKVAGGGVSSSRFWRLHQAARAFSSGGKEMNVRDALNSALDEEMAADSKVFIMG 385
M I+ QK G + R + A RA+SS KEM VR+ALNSALDEEM+AD KVF+MG
Sbjct: 1 MLGIIKQKALGKSLQRIRP-AVASAWRAYSSAAKEMTVREALNSALDEEMSADPKVFLMG 59
Query: 386 EEVGE 400
EEVGE
Sbjct: 60 EEVGE 64
>ref|XP_002304661.2| pyruvate dehydrogenase family protein [Populus trichocarpa]
gi|566163024|ref|XP_002304660.2| hypothetical protein
POPTR_0003s16480g [Populus trichocarpa]
gi|118481185|gb|ABK92544.1| unknown [Populus
trichocarpa] gi|550343320|gb|EEE79640.2| pyruvate
dehydrogenase family protein [Populus trichocarpa]
gi|550343321|gb|EEE79639.2| hypothetical protein
POPTR_0003s16480g [Populus trichocarpa]
Length = 373
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Frame = +2
Query: 206 MSRIMMQKVAGGGVSSSRFWRLHQAA----RAFSSGGKEMNVRDALNSALDEEMAADSKV 373
M I+ QK++ GG F + + A R +SS KE+ VR+ALNSALDEEM+AD KV
Sbjct: 1 MFGIVRQKISAGGSPLLAFGQRIRPAVSAWRGYSSAAKEITVREALNSALDEEMSADPKV 60
Query: 374 FIMGEEVGE 400
F+MGEEVGE
Sbjct: 61 FLMGEEVGE 69
>ref|XP_004310117.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 376
Score = 65.9 bits (159), Expect = 5e-09
Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Frame = +2
Query: 206 MSRIMMQKVAGGGVSSSRFWRLHQ------AARAFSSGGKE-MNVRDALNSALDEEMAAD 364
M I+ QK+ S++ +L + A R FSS KE M VRDALNSALDEEM+AD
Sbjct: 1 MLGILRQKLGAASSSATMLGQLQRIRPAVSALRGFSSSAKEQMTVRDALNSALDEEMSAD 60
Query: 365 SKVFIMGEEVGE 400
KVFIMGEEVGE
Sbjct: 61 PKVFIMGEEVGE 72
>ref|XP_004241456.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta,
mitochondrial-like [Solanum lycopersicum]
Length = 367
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +2
Query: 278 AARAFSSGGKEMNVRDALNSALDEEMAADSKVFIMGEEVGE 400
A+R +SS KEM VRDALNSALDEEM+AD KVF+MGEEVGE
Sbjct: 28 ASRTYSSAVKEMTVRDALNSALDEEMSADPKVFVMGEEVGE 68
>ref|XP_002280637.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta,
mitochondrial-like [Vitis vinifera]
Length = 407
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/66 (50%), Positives = 50/66 (75%)
Frame = +2
Query: 203 RMSRIMMQKVAGGGVSSSRFWRLHQAARAFSSGGKEMNVRDALNSALDEEMAADSKVFIM 382
+M ++ +VA G + +R + A+R+++SG K+M VR+ALN+A+DEEM+AD KVF+M
Sbjct: 38 KMEVVLELEVAETGDALNRTRPVVYASRSYASGPKQMTVREALNTAIDEEMSADPKVFLM 97
Query: 383 GEEVGE 400
GEEVGE
Sbjct: 98 GEEVGE 103