BLASTX nr result

ID: Rheum21_contig00018017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00018017
         (226 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004515015.1| PREDICTED: pentatricopeptide repeat-containi...    85   9e-15
ref|XP_006594225.1| PREDICTED: pentatricopeptide repeat-containi...    79   6e-13
ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]    78   1e-12
ref|XP_004308661.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_004308660.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_003610363.1| Pentatricopeptide repeat-containing protein ...    76   4e-12
gb|ESW26898.1| hypothetical protein PHAVU_003G157500g [Phaseolus...    74   2e-11
gb|ESW26897.1| hypothetical protein PHAVU_003G157500g [Phaseolus...    74   2e-11
gb|EOY01069.1| Tetratricopeptide repeat-like superfamily protein...    72   8e-11
ref|XP_002510620.1| pentatricopeptide repeat-containing protein,...    72   8e-11
ref|XP_004233934.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_006344830.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
ref|XP_004292257.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
gb|EPS64446.1| hypothetical protein M569_10333, partial [Genlise...    69   5e-10
ref|XP_002318942.2| pentatricopeptide repeat-containing family p...    67   2e-09
gb|EXC54206.1| hypothetical protein L484_001394 [Morus notabilis]      66   6e-09
ref|XP_004968767.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    65   9e-09
ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    65   1e-08

>ref|XP_004515015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Cicer arietinum]
          Length = 719

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 43/74 (58%), Positives = 57/74 (77%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           +RN+VS  TMISGYA + +A +++E F L M CE E ENE+ LTSVLSALTS + +D GR
Sbjct: 179 DRNTVSWATMISGYAASDLAGEAIEVFGL-MRCEEEIENEFALTSVLSALTSNEFVDTGR 237

Query: 182 QVHATSVKDGLICI 223
           QVH+ ++K+GLI I
Sbjct: 238 QVHSLAIKNGLISI 251


>ref|XP_006594225.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like isoform X1 [Glycine max]
          Length = 735

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECEL-ERENEYVLTSVLSALTSPQLIDVG 178
           ERN+VS  TMISGYA  ++A ++ E FKL    E  + ENE+V TSVLSALT   L++ G
Sbjct: 179 ERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTG 238

Query: 179 RQVHATSVKDGLICI 223
           RQVH+ ++K+GL+CI
Sbjct: 239 RQVHSLAMKNGLVCI 253


>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
           protein product [Vitis vinifera]
          Length = 703

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 41/74 (55%), Positives = 57/74 (77%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERNSVS  TMISGYA  ++A++++  F+L M  E E ENE+V TSVLSALT P+L++ G+
Sbjct: 171 ERNSVSWATMISGYASQKLAAEALGLFRL-MRREEEGENEFVFTSVLSALTLPELVNNGK 229

Query: 182 QVHATSVKDGLICI 223
           Q+H  +VK+GL+ I
Sbjct: 230 QIHCIAVKNGLLSI 243


>emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 41/74 (55%), Positives = 57/74 (77%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERNSVS  TMISGYA  ++A++++  F+L M  E E ENE+V TSVLSALT P+L++ G+
Sbjct: 171 ERNSVSWATMISGYASQKLAAEALGLFRL-MRREEEGENEFVFTSVLSALTLPELVNNGK 229

Query: 182 QVHATSVKDGLICI 223
           Q+H  +VK+GL+ I
Sbjct: 230 QIHCIAVKNGLLSI 243


>ref|XP_004308661.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Fragaria vesca subsp. vesca]
          Length = 718

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECE-LERENEYVLTSVLSALTSPQLIDVG 178
           ERNSV+  TMISGYA++Q+  D++E F L    E  E ENE+V+T+VLS L  P+L+D G
Sbjct: 188 ERNSVTWATMISGYAMHQLGGDALEVFVLMRRSEEREEENEFVVTAVLSGLMIPELVDRG 247

Query: 179 RQVHATSVKDGL 214
           +QVH  +VK+GL
Sbjct: 248 KQVHCVAVKNGL 259


>ref|XP_004308660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Fragaria vesca subsp. vesca]
          Length = 706

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/73 (53%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECEL-ERENEYVLTSVLSALTSPQLIDVG 178
           ERNSVS  TMISGYA+ ++A ++VE F+L    E  E ENE+VLTSV+SAL   + +D G
Sbjct: 176 ERNSVSWATMISGYAMQRMAGEAVEVFRLMRRSEENEGENEFVLTSVVSALAVREFVDTG 235

Query: 179 RQVHATSVKDGLI 217
           +Q+H  +VK+GL+
Sbjct: 236 KQIHCVAVKNGLM 248


>ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355511418|gb|AES92560.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 734

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 42/74 (56%), Positives = 54/74 (72%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERN+VS  TMISGYA + IA  +VE F+L M  E E +NE+ LTSVLSALTS   +  GR
Sbjct: 181 ERNTVSWATMISGYASSDIADKAVEVFEL-MRREEEIQNEFALTSVLSALTSDVFVYTGR 239

Query: 182 QVHATSVKDGLICI 223
           QVH+ ++K+GL+ I
Sbjct: 240 QVHSLAIKNGLLAI 253


>gb|ESW26898.1| hypothetical protein PHAVU_003G157500g [Phaseolus vulgaris]
          Length = 725

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +2

Query: 5   RNSVS*TTMISGYAINQIASDSVETFKLFM-ECELERENEYVLTSVLSALTSPQLIDVGR 181
           RN+VS  TMISGYA  +   ++ E F+L   E E + ENE+V TSVLSALT    +D GR
Sbjct: 177 RNAVSWATMISGYASKEFVYEAFELFELLRREKEGDNENEFVFTSVLSALTCHVFVDTGR 236

Query: 182 QVHATSVKDGLIC 220
           QVH+ +VK+GL+C
Sbjct: 237 QVHSLAVKNGLVC 249


>gb|ESW26897.1| hypothetical protein PHAVU_003G157500g [Phaseolus vulgaris]
          Length = 732

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +2

Query: 5   RNSVS*TTMISGYAINQIASDSVETFKLFM-ECELERENEYVLTSVLSALTSPQLIDVGR 181
           RN+VS  TMISGYA  +   ++ E F+L   E E + ENE+V TSVLSALT    +D GR
Sbjct: 177 RNAVSWATMISGYASKEFVYEAFELFELLRREKEGDNENEFVFTSVLSALTCHVFVDTGR 236

Query: 182 QVHATSVKDGLIC 220
           QVH+ +VK+GL+C
Sbjct: 237 QVHSLAVKNGLVC 249


>gb|EOY01069.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 716

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/72 (51%), Positives = 52/72 (72%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ++NSVS  TMISGYA+ + A D+ E F+L M  E E+ NEY ++SVLSAL  P+ ++ GR
Sbjct: 173 KKNSVSWATMISGYAMQRSALDAFELFEL-MRQEEEKVNEYAMSSVLSALADPEFLNTGR 231

Query: 182 QVHATSVKDGLI 217
           Q+H  +VK GL+
Sbjct: 232 QIHCFTVKHGLL 243


>ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551321|gb|EEF52807.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/72 (51%), Positives = 50/72 (69%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERN V+  TMISGYAI ++A ++ E F+L M  E E  NE+  TSVLSAL  P+ +D G+
Sbjct: 174 ERNEVTWATMISGYAIQRLAGEAFEVFEL-MRREEEDVNEFAFTSVLSALAVPEFVDSGK 232

Query: 182 QVHATSVKDGLI 217
           Q+H  +VK GL+
Sbjct: 233 QIHCLAVKTGLL 244


>ref|XP_004233934.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Solanum lycopersicum]
          Length = 721

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/72 (47%), Positives = 50/72 (69%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERNSVS TTMISGYA+ ++  ++V  F + +    E  NE+V TSVLSA+  P+ + VG+
Sbjct: 182 ERNSVSCTTMISGYALQRMVKEAVGVFSVMLLKRGEDVNEFVFTSVLSAIALPEFVYVGK 241

Query: 182 QVHATSVKDGLI 217
           Q+H  S+K+G +
Sbjct: 242 QIHCLSLKNGFL 253


>ref|XP_006344830.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Solanum tuberosum]
          Length = 721

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/72 (47%), Positives = 50/72 (69%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERNSVS TTMISGYA+ ++  ++V  F + +    E  NE+V TSVLSA+  P+ + VG+
Sbjct: 182 ERNSVSWTTMISGYALQRMVKEAVGVFSVMLWERGEDVNEFVFTSVLSAIALPEFVYVGK 241

Query: 182 QVHATSVKDGLI 217
           Q+H  S+K+G +
Sbjct: 242 QIHCLSLKNGFL 253


>ref|XP_004292257.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Fragaria vesca subsp. vesca]
          Length = 415

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECEL-ERENEYVLTSVLSALTSPQLIDVG 178
           ERNSVS  TMISGYA+  +A  +VE F L    E  E ENE+VLTSV+S L   + +D G
Sbjct: 16  ERNSVSWATMISGYAMLHMAGKAVEVFGLMRRSEENEGENEFVLTSVVSMLAVREFVDTG 75

Query: 179 RQVHATSVKDGLI 217
           +Q+H  +VK+GL+
Sbjct: 76  KQIHCLAVKNGLM 88


>gb|EPS64446.1| hypothetical protein M569_10333, partial [Genlisea aurea]
          Length = 679

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/74 (44%), Positives = 51/74 (68%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERNSV+ ++MISGYA  ++  +++E FK+ +    E  NE+V T VLSA+TSP+ +  G 
Sbjct: 152 ERNSVTWSSMISGYAYQRLPFEALELFKMMISQSSEYPNEFVFTGVLSAVTSPESLQKGI 211

Query: 182 QVHATSVKDGLICI 223
           Q+H  ++K GL+ I
Sbjct: 212 QIHCLAIKTGLLSI 225


>ref|XP_002318942.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550324648|gb|EEE94865.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 707

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/72 (51%), Positives = 48/72 (66%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERN VS TTMISGYA  Q+A +++  F L    E    NE+V TSVLSAL  P+ +D G+
Sbjct: 175 ERNLVSWTTMISGYASKQMAKEALGVFGLMRLVE-GNLNEFVFTSVLSALVCPEFVDSGK 233

Query: 182 QVHATSVKDGLI 217
           QVH   VK+G++
Sbjct: 234 QVHCVVVKNGVL 245


>gb|EXC54206.1| hypothetical protein L484_001394 [Morus notabilis]
          Length = 719

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 32/73 (43%), Positives = 47/73 (64%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERNSVS  TMISGY   ++  +++  F+     E   +NE+  T VLSAL  P+++D G+
Sbjct: 172 ERNSVSWATMISGYGKARMEREALGVFRAMRREEKGCDNEFCFTGVLSALRVPEVLDCGK 231

Query: 182 QVHATSVKDGLIC 220
           Q+H  +VK GL+C
Sbjct: 232 QIHCLAVKKGLLC 244


>ref|XP_004968767.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Setaria italica]
          Length = 743

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 35/72 (48%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = +2

Query: 5   RNSVS*TTMISGYAINQIASDSVETFKLFM-ECELERENEYVLTSVLSALTSPQLIDVGR 181
           RN+VS T M+SGYA+ + + ++ E F+L + EC LE+ NE+V T+VLSA++ P  + +G 
Sbjct: 189 RNAVSWTAMVSGYALGKCSEEAFEIFQLMLQECPLEK-NEFVTTAVLSAVSVPSGLLMGV 247

Query: 182 QVHATSVKDGLI 217
           QVH   VKDGL+
Sbjct: 248 QVHGLVVKDGLV 259


>ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/74 (45%), Positives = 52/74 (70%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERN+VS  T+ISGYA+ ++A ++ E F L M  E    ++++ TSVLSALT P L+  G+
Sbjct: 176 ERNTVSWATIISGYAMERMAFEAWELF-LLMRREEGAHDKFIYTSVLSALTVPDLVHYGK 234

Query: 182 QVHATSVKDGLICI 223
           Q+H  ++K+GL+ I
Sbjct: 235 QIHCLALKNGLLSI 248


>ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/74 (45%), Positives = 52/74 (70%)
 Frame = +2

Query: 2   ERNSVS*TTMISGYAINQIASDSVETFKLFMECELERENEYVLTSVLSALTSPQLIDVGR 181
           ERN+VS  T+ISGYA+ ++A ++ E F L M  E    ++++ TSVLSALT P L+  G+
Sbjct: 176 ERNTVSWATIISGYAMERMAFEAWELFXL-MRREEGAHDKFIYTSVLSALTVPDLVHYGK 234

Query: 182 QVHATSVKDGLICI 223
           Q+H  ++K+GL+ I
Sbjct: 235 QIHCLALKNGLLSI 248


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