BLASTX nr result

ID: Rheum21_contig00017945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00017945
         (415 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81267.1| hypothetical protein VITISV_006142 [Vitis vinifera]    94   1e-17
gb|ESW10111.1| hypothetical protein PHAVU_009G181600g [Phaseolus...    94   2e-17
emb|CBI34978.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 4...    94   2e-17
gb|EOY02291.1| RING/U-box superfamily protein with ARM repeat do...    88   1e-15
ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 3...    85   9e-15
ref|XP_004301280.1| PREDICTED: U-box domain-containing protein 3...    85   1e-14
ref|XP_004501958.1| PREDICTED: U-box domain-containing protein 3...    84   3e-14
gb|EMJ12147.1| hypothetical protein PRUPE_ppa024003mg [Prunus pe...    84   3e-14
ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 3...    83   3e-14
ref|XP_006431015.1| hypothetical protein CICLE_v10011415mg [Citr...    82   6e-14
gb|EXC45072.1| U-box domain-containing protein 40 [Morus notabilis]    81   1e-13
ref|XP_006482485.1| PREDICTED: U-box domain-containing protein 4...    81   2e-13
ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 3...    81   2e-13
ref|XP_002321563.1| hypothetical protein POPTR_0015s08250g [Popu...    81   2e-13
gb|EXB42062.1| U-box domain-containing protein 38 [Morus notabilis]    80   3e-13
dbj|BAB10895.1| unnamed protein product [Arabidopsis thaliana]         80   4e-13
ref|XP_002318018.2| hypothetical protein POPTR_0012s07790g [Popu...    80   4e-13
ref|NP_198830.1| armadillo/beta-catenin repeat and RING/U-box do...    80   4e-13
ref|XP_006439742.1| hypothetical protein CICLE_v10019643mg [Citr...    79   6e-13

>emb|CAN81267.1| hypothetical protein VITISV_006142 [Vitis vinifera]
          Length = 543

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 3/66 (4%)
 Frame = +1

Query: 226 QMGSGKHRWKISIYRSSS---ASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACV 396
           +MG+GK RW++  Y+SSS   ASK + K PP+EF+CPISGSLMADPVIVSS QTFERACV
Sbjct: 28  EMGNGKQRWRV-FYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACV 86

Query: 397 QACKTL 414
           Q CK L
Sbjct: 87  QVCKAL 92


>gb|ESW10111.1| hypothetical protein PHAVU_009G181600g [Phaseolus vulgaris]
          Length = 533

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/62 (70%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
 Frame = +1

Query: 232 GSGKHRWKISIYRSSS-ASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACK 408
           G+GKHRWKIS +RSSS +SK +PK PP+EF CPISGSLM+DPV+V+S QTFER  VQ CK
Sbjct: 3   GNGKHRWKISFHRSSSQSSKMDPKLPPKEFTCPISGSLMSDPVVVASGQTFERLAVQVCK 62

Query: 409 TL 414
            L
Sbjct: 63  DL 64


>emb|CBI34978.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/65 (70%), Positives = 53/65 (81%), Gaps = 3/65 (4%)
 Frame = +1

Query: 229 MGSGKHRWKISIYRSSS---ASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQ 399
           MG+GK RW++  Y+SSS   ASK + K PP+EF+CPISGSLMADPVIVSS QTFERACVQ
Sbjct: 1   MGNGKQRWRV-FYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACVQ 59

Query: 400 ACKTL 414
            CK L
Sbjct: 60  VCKAL 64


>ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 40 [Vitis vinifera]
          Length = 519

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/65 (70%), Positives = 53/65 (81%), Gaps = 3/65 (4%)
 Frame = +1

Query: 229 MGSGKHRWKISIYRSSS---ASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQ 399
           MG+GK RW++  Y+SSS   ASK + K PP+EF+CPISGSLMADPVIVSS QTFERACVQ
Sbjct: 1   MGNGKQRWRV-FYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACVQ 59

Query: 400 ACKTL 414
            CK L
Sbjct: 60  VCKAL 64


>gb|EOY02291.1| RING/U-box superfamily protein with ARM repeat domain, putative
           [Theobroma cacao]
          Length = 574

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/65 (70%), Positives = 51/65 (78%), Gaps = 5/65 (7%)
 Frame = +1

Query: 235 SGKHRWKISIYRSSS--ASKT---EPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQ 399
           + K +W+IS YRSSS  ASKT   +PK  PEEF CPISGSLMAD VIVSS  TFERACV+
Sbjct: 37  AAKQKWRISFYRSSSTNASKTCQAQPKQTPEEFSCPISGSLMADAVIVSSGHTFERACVE 96

Query: 400 ACKTL 414
           ACKTL
Sbjct: 97  ACKTL 101


>ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 525

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
 Frame = +1

Query: 232 GSGKHRWKISIYRSSS-ASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACK 408
           G+GKHRWK S +RSSS  S  +P   P+EF CPISGSLM+DPV+V+S QTFER  VQ CK
Sbjct: 3   GNGKHRWKFSFHRSSSQTSNPDPNQVPKEFTCPISGSLMSDPVVVASGQTFERLAVQLCK 62

Query: 409 TL 414
            L
Sbjct: 63  DL 64


>ref|XP_004301280.1| PREDICTED: U-box domain-containing protein 38-like [Fragaria vesca
           subsp. vesca]
          Length = 543

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/59 (66%), Positives = 49/59 (83%)
 Frame = +1

Query: 232 GSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACK 408
           G+GKHRW+IS +RS+S++K     PP+EFICPISGSLM+DPVIV+S QTFER  VQ C+
Sbjct: 3   GNGKHRWRISFHRSNSSAK----QPPKEFICPISGSLMSDPVIVASGQTFERRSVQVCR 57


>ref|XP_004501958.1| PREDICTED: U-box domain-containing protein 38-like [Cicer
           arietinum]
          Length = 524

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/61 (65%), Positives = 47/61 (77%)
 Frame = +1

Query: 232 GSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACKT 411
           G+GKHRWKIS +RSS+ SK     PP+EF+CPISGSLM+DPV+ SS QTFER  VQ C  
Sbjct: 3   GNGKHRWKISFHRSSTHSKQI--QPPKEFLCPISGSLMSDPVVTSSGQTFERISVQVCAD 60

Query: 412 L 414
           L
Sbjct: 61  L 61


>gb|EMJ12147.1| hypothetical protein PRUPE_ppa024003mg [Prunus persica]
          Length = 530

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/59 (64%), Positives = 47/59 (79%)
 Frame = +1

Query: 232 GSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACK 408
           G+GKHRWKIS YRS+S+S+     PP+E +CPISGSLM+DPV+VSS QTFER   Q C+
Sbjct: 3   GNGKHRWKISFYRSNSSSRL----PPKELLCPISGSLMSDPVVVSSGQTFERLSAQVCR 57


>ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 38-like [Vitis vinifera]
          Length = 523

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/61 (67%), Positives = 49/61 (80%)
 Frame = +1

Query: 232 GSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACKT 411
           G+GKHRWKIS +RSSS+    PK  P+EF+CPISGSLMADPV+V+S QTFER  VQ C+ 
Sbjct: 3   GNGKHRWKIS-FRSSSSM---PKQSPKEFMCPISGSLMADPVVVASGQTFERISVQVCRN 58

Query: 412 L 414
           L
Sbjct: 59  L 59


>ref|XP_006431015.1| hypothetical protein CICLE_v10011415mg [Citrus clementina]
           gi|557533072|gb|ESR44255.1| hypothetical protein
           CICLE_v10011415mg [Citrus clementina]
          Length = 546

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 8/66 (12%)
 Frame = +1

Query: 241 KHRWKISIYRSSSA--------SKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACV 396
           + +WKIS YRSSS+         K +   PP EF+CP+SGSLMADPV+VSS  TFERACV
Sbjct: 13  RQKWKISFYRSSSSISTKAHQLQKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACV 72

Query: 397 QACKTL 414
             CKTL
Sbjct: 73  HVCKTL 78


>gb|EXC45072.1| U-box domain-containing protein 40 [Morus notabilis]
          Length = 580

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 7/92 (7%)
 Frame = +1

Query: 160 HGPFIQLIKKLRIQQK*SSPDTQMGSGKHRWKISIYRSSSASKTEP-------KNPPEEF 318
           H P  +  ++ + ++K     T+ G+ + +WKI  ++ SS++ T P       K PP +F
Sbjct: 13  HQPVEKKQRERKKEKKAEKKGTETGNTRSKWKI--FQRSSSNSTVPLKNEVPKKEPPRDF 70

Query: 319 ICPISGSLMADPVIVSSSQTFERACVQACKTL 414
           +CPI+GSLMADPVIVSS  TFERACV ACK L
Sbjct: 71  LCPITGSLMADPVIVSSGHTFERACVDACKAL 102


>ref|XP_006482485.1| PREDICTED: U-box domain-containing protein 40-like [Citrus
           sinensis]
          Length = 546

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 8/66 (12%)
 Frame = +1

Query: 241 KHRWKISIYRSSSA--------SKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACV 396
           + +WKIS YRSSS+         K +   PP EF+CP+SGSLMADPV+VSS  TFERAC 
Sbjct: 13  RQKWKISFYRSSSSISTKAHQLQKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACA 72

Query: 397 QACKTL 414
             CKTL
Sbjct: 73  HVCKTL 78


>ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 518

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/61 (62%), Positives = 46/61 (75%)
 Frame = +1

Query: 232 GSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACKT 411
           G+GKHRWK S +RSS+       +PP+EF CPISGSLM+DPV+V+S QTFER  VQ CK 
Sbjct: 3   GNGKHRWKFSFHRSST-------HPPKEFTCPISGSLMSDPVVVASGQTFERLAVQLCKD 55

Query: 412 L 414
           L
Sbjct: 56  L 56


>ref|XP_002321563.1| hypothetical protein POPTR_0015s08250g [Populus trichocarpa]
           gi|222868559|gb|EEF05690.1| hypothetical protein
           POPTR_0015s08250g [Populus trichocarpa]
          Length = 537

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
 Frame = +1

Query: 232 GSGKHRWKISIYRSSSASKTE--PKNPPEEFICPISGSLMADPVIVSSSQTFERACVQAC 405
           G+GK RWKIS Y  S  ++T+   + PP+EFICPISGSLM DPV+VSS QTFER  VQ C
Sbjct: 3   GNGKRRWKISFYSRSKPTQTQHQQQQPPKEFICPISGSLMFDPVVVSSGQTFERLSVQVC 62

Query: 406 KTL 414
             L
Sbjct: 63  HDL 65


>gb|EXB42062.1| U-box domain-containing protein 38 [Morus notabilis]
          Length = 549

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 12/73 (16%)
 Frame = +1

Query: 232 GSGKHRWKISIYRSSSASKT------------EPKNPPEEFICPISGSLMADPVIVSSSQ 375
           G+GKHRWKIS +R SS+S +            + + PP++F+CPI G+LMADPV+VSS Q
Sbjct: 3   GNGKHRWKISFHRPSSSSSSSKMEANHHNHHKQQEEPPKDFLCPIYGALMADPVVVSSGQ 62

Query: 376 TFERACVQACKTL 414
           TFER  VQ C+ L
Sbjct: 63  TFERLSVQLCRNL 75


>dbj|BAB10895.1| unnamed protein product [Arabidopsis thaliana]
          Length = 540

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/65 (58%), Positives = 49/65 (75%), Gaps = 5/65 (7%)
 Frame = +1

Query: 235 SGKHRWKISIYRSSSASKTEPKNP-----PEEFICPISGSLMADPVIVSSSQTFERACVQ 399
           +GK +W+ S+ RSSS+S +   +P     P EF+CPISGSLMADP+IVSS  ++ERACV 
Sbjct: 20  AGKSKWRTSLSRSSSSSSSNNNSPTKTEIPAEFLCPISGSLMADPIIVSSGHSYERACVI 79

Query: 400 ACKTL 414
           ACKTL
Sbjct: 80  ACKTL 84


>ref|XP_002318018.2| hypothetical protein POPTR_0012s07790g [Populus trichocarpa]
           gi|550326606|gb|EEE96238.2| hypothetical protein
           POPTR_0012s07790g [Populus trichocarpa]
          Length = 546

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 37/66 (56%), Positives = 47/66 (71%)
 Frame = +1

Query: 217 PDTQMGSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACV 396
           P    G+GK RW IS Y  S  ++T+ + PP+EF+CPI GSLM+DPV+VSS QTFER  V
Sbjct: 26  PQAMGGNGKRRWNISFYSRSKTTQTQ-QLPPKEFLCPIYGSLMSDPVVVSSGQTFERLSV 84

Query: 397 QACKTL 414
           Q C+ L
Sbjct: 85  QVCRDL 90


>ref|NP_198830.1| armadillo/beta-catenin repeat and RING/U-box domain-containing
           protein [Arabidopsis thaliana]
           gi|334302849|sp|Q9FL17.2|PUB40_ARATH RecName: Full=U-box
           domain-containing protein 40; AltName: Full=Plant U-box
           protein 40 gi|332007129|gb|AED94512.1|
           armadillo/beta-catenin repeat and RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 550

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/65 (58%), Positives = 49/65 (75%), Gaps = 5/65 (7%)
 Frame = +1

Query: 235 SGKHRWKISIYRSSSASKTEPKNP-----PEEFICPISGSLMADPVIVSSSQTFERACVQ 399
           +GK +W+ S+ RSSS+S +   +P     P EF+CPISGSLMADP+IVSS  ++ERACV 
Sbjct: 30  AGKSKWRTSLSRSSSSSSSNNNSPTKTEIPAEFLCPISGSLMADPIIVSSGHSYERACVI 89

Query: 400 ACKTL 414
           ACKTL
Sbjct: 90  ACKTL 94


>ref|XP_006439742.1| hypothetical protein CICLE_v10019643mg [Citrus clementina]
           gi|557542004|gb|ESR52982.1| hypothetical protein
           CICLE_v10019643mg [Citrus clementina]
          Length = 537

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 36/62 (58%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
 Frame = +1

Query: 232 GSGKH-RWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACK 408
           G+GKH RWKIS +  S+++   PK+PP+EF+CP+SGSLM DPV+VS+ QTF+R  VQ C+
Sbjct: 3   GNGKHHRWKISFFHRSNSN---PKHPPKEFLCPVSGSLMFDPVVVSTGQTFDRVSVQVCR 59

Query: 409 TL 414
            L
Sbjct: 60  EL 61


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