BLASTX nr result
ID: Rheum21_contig00017945
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00017945
(415 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81267.1| hypothetical protein VITISV_006142 [Vitis vinifera] 94 1e-17
gb|ESW10111.1| hypothetical protein PHAVU_009G181600g [Phaseolus... 94 2e-17
emb|CBI34978.3| unnamed protein product [Vitis vinifera] 94 2e-17
ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 4... 94 2e-17
gb|EOY02291.1| RING/U-box superfamily protein with ARM repeat do... 88 1e-15
ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 3... 85 9e-15
ref|XP_004301280.1| PREDICTED: U-box domain-containing protein 3... 85 1e-14
ref|XP_004501958.1| PREDICTED: U-box domain-containing protein 3... 84 3e-14
gb|EMJ12147.1| hypothetical protein PRUPE_ppa024003mg [Prunus pe... 84 3e-14
ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 3... 83 3e-14
ref|XP_006431015.1| hypothetical protein CICLE_v10011415mg [Citr... 82 6e-14
gb|EXC45072.1| U-box domain-containing protein 40 [Morus notabilis] 81 1e-13
ref|XP_006482485.1| PREDICTED: U-box domain-containing protein 4... 81 2e-13
ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 3... 81 2e-13
ref|XP_002321563.1| hypothetical protein POPTR_0015s08250g [Popu... 81 2e-13
gb|EXB42062.1| U-box domain-containing protein 38 [Morus notabilis] 80 3e-13
dbj|BAB10895.1| unnamed protein product [Arabidopsis thaliana] 80 4e-13
ref|XP_002318018.2| hypothetical protein POPTR_0012s07790g [Popu... 80 4e-13
ref|NP_198830.1| armadillo/beta-catenin repeat and RING/U-box do... 80 4e-13
ref|XP_006439742.1| hypothetical protein CICLE_v10019643mg [Citr... 79 6e-13
>emb|CAN81267.1| hypothetical protein VITISV_006142 [Vitis vinifera]
Length = 543
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 3/66 (4%)
Frame = +1
Query: 226 QMGSGKHRWKISIYRSSS---ASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACV 396
+MG+GK RW++ Y+SSS ASK + K PP+EF+CPISGSLMADPVIVSS QTFERACV
Sbjct: 28 EMGNGKQRWRV-FYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACV 86
Query: 397 QACKTL 414
Q CK L
Sbjct: 87 QVCKAL 92
>gb|ESW10111.1| hypothetical protein PHAVU_009G181600g [Phaseolus vulgaris]
Length = 533
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/62 (70%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = +1
Query: 232 GSGKHRWKISIYRSSS-ASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACK 408
G+GKHRWKIS +RSSS +SK +PK PP+EF CPISGSLM+DPV+V+S QTFER VQ CK
Sbjct: 3 GNGKHRWKISFHRSSSQSSKMDPKLPPKEFTCPISGSLMSDPVVVASGQTFERLAVQVCK 62
Query: 409 TL 414
L
Sbjct: 63 DL 64
>emb|CBI34978.3| unnamed protein product [Vitis vinifera]
Length = 683
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/65 (70%), Positives = 53/65 (81%), Gaps = 3/65 (4%)
Frame = +1
Query: 229 MGSGKHRWKISIYRSSS---ASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQ 399
MG+GK RW++ Y+SSS ASK + K PP+EF+CPISGSLMADPVIVSS QTFERACVQ
Sbjct: 1 MGNGKQRWRV-FYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACVQ 59
Query: 400 ACKTL 414
CK L
Sbjct: 60 VCKAL 64
>ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 40 [Vitis vinifera]
Length = 519
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/65 (70%), Positives = 53/65 (81%), Gaps = 3/65 (4%)
Frame = +1
Query: 229 MGSGKHRWKISIYRSSS---ASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQ 399
MG+GK RW++ Y+SSS ASK + K PP+EF+CPISGSLMADPVIVSS QTFERACVQ
Sbjct: 1 MGNGKQRWRV-FYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACVQ 59
Query: 400 ACKTL 414
CK L
Sbjct: 60 VCKAL 64
>gb|EOY02291.1| RING/U-box superfamily protein with ARM repeat domain, putative
[Theobroma cacao]
Length = 574
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/65 (70%), Positives = 51/65 (78%), Gaps = 5/65 (7%)
Frame = +1
Query: 235 SGKHRWKISIYRSSS--ASKT---EPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQ 399
+ K +W+IS YRSSS ASKT +PK PEEF CPISGSLMAD VIVSS TFERACV+
Sbjct: 37 AAKQKWRISFYRSSSTNASKTCQAQPKQTPEEFSCPISGSLMADAVIVSSGHTFERACVE 96
Query: 400 ACKTL 414
ACKTL
Sbjct: 97 ACKTL 101
>ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
Length = 525
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +1
Query: 232 GSGKHRWKISIYRSSS-ASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACK 408
G+GKHRWK S +RSSS S +P P+EF CPISGSLM+DPV+V+S QTFER VQ CK
Sbjct: 3 GNGKHRWKFSFHRSSSQTSNPDPNQVPKEFTCPISGSLMSDPVVVASGQTFERLAVQLCK 62
Query: 409 TL 414
L
Sbjct: 63 DL 64
>ref|XP_004301280.1| PREDICTED: U-box domain-containing protein 38-like [Fragaria vesca
subsp. vesca]
Length = 543
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = +1
Query: 232 GSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACK 408
G+GKHRW+IS +RS+S++K PP+EFICPISGSLM+DPVIV+S QTFER VQ C+
Sbjct: 3 GNGKHRWRISFHRSNSSAK----QPPKEFICPISGSLMSDPVIVASGQTFERRSVQVCR 57
>ref|XP_004501958.1| PREDICTED: U-box domain-containing protein 38-like [Cicer
arietinum]
Length = 524
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +1
Query: 232 GSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACKT 411
G+GKHRWKIS +RSS+ SK PP+EF+CPISGSLM+DPV+ SS QTFER VQ C
Sbjct: 3 GNGKHRWKISFHRSSTHSKQI--QPPKEFLCPISGSLMSDPVVTSSGQTFERISVQVCAD 60
Query: 412 L 414
L
Sbjct: 61 L 61
>gb|EMJ12147.1| hypothetical protein PRUPE_ppa024003mg [Prunus persica]
Length = 530
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/59 (64%), Positives = 47/59 (79%)
Frame = +1
Query: 232 GSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACK 408
G+GKHRWKIS YRS+S+S+ PP+E +CPISGSLM+DPV+VSS QTFER Q C+
Sbjct: 3 GNGKHRWKISFYRSNSSSRL----PPKELLCPISGSLMSDPVVVSSGQTFERLSAQVCR 57
>ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 38-like [Vitis vinifera]
Length = 523
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/61 (67%), Positives = 49/61 (80%)
Frame = +1
Query: 232 GSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACKT 411
G+GKHRWKIS +RSSS+ PK P+EF+CPISGSLMADPV+V+S QTFER VQ C+
Sbjct: 3 GNGKHRWKIS-FRSSSSM---PKQSPKEFMCPISGSLMADPVVVASGQTFERISVQVCRN 58
Query: 412 L 414
L
Sbjct: 59 L 59
>ref|XP_006431015.1| hypothetical protein CICLE_v10011415mg [Citrus clementina]
gi|557533072|gb|ESR44255.1| hypothetical protein
CICLE_v10011415mg [Citrus clementina]
Length = 546
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 8/66 (12%)
Frame = +1
Query: 241 KHRWKISIYRSSSA--------SKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACV 396
+ +WKIS YRSSS+ K + PP EF+CP+SGSLMADPV+VSS TFERACV
Sbjct: 13 RQKWKISFYRSSSSISTKAHQLQKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACV 72
Query: 397 QACKTL 414
CKTL
Sbjct: 73 HVCKTL 78
>gb|EXC45072.1| U-box domain-containing protein 40 [Morus notabilis]
Length = 580
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 7/92 (7%)
Frame = +1
Query: 160 HGPFIQLIKKLRIQQK*SSPDTQMGSGKHRWKISIYRSSSASKTEP-------KNPPEEF 318
H P + ++ + ++K T+ G+ + +WKI ++ SS++ T P K PP +F
Sbjct: 13 HQPVEKKQRERKKEKKAEKKGTETGNTRSKWKI--FQRSSSNSTVPLKNEVPKKEPPRDF 70
Query: 319 ICPISGSLMADPVIVSSSQTFERACVQACKTL 414
+CPI+GSLMADPVIVSS TFERACV ACK L
Sbjct: 71 LCPITGSLMADPVIVSSGHTFERACVDACKAL 102
>ref|XP_006482485.1| PREDICTED: U-box domain-containing protein 40-like [Citrus
sinensis]
Length = 546
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 8/66 (12%)
Frame = +1
Query: 241 KHRWKISIYRSSSA--------SKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACV 396
+ +WKIS YRSSS+ K + PP EF+CP+SGSLMADPV+VSS TFERAC
Sbjct: 13 RQKWKISFYRSSSSISTKAHQLQKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACA 72
Query: 397 QACKTL 414
CKTL
Sbjct: 73 HVCKTL 78
>ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
Length = 518
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/61 (62%), Positives = 46/61 (75%)
Frame = +1
Query: 232 GSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACKT 411
G+GKHRWK S +RSS+ +PP+EF CPISGSLM+DPV+V+S QTFER VQ CK
Sbjct: 3 GNGKHRWKFSFHRSST-------HPPKEFTCPISGSLMSDPVVVASGQTFERLAVQLCKD 55
Query: 412 L 414
L
Sbjct: 56 L 56
>ref|XP_002321563.1| hypothetical protein POPTR_0015s08250g [Populus trichocarpa]
gi|222868559|gb|EEF05690.1| hypothetical protein
POPTR_0015s08250g [Populus trichocarpa]
Length = 537
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Frame = +1
Query: 232 GSGKHRWKISIYRSSSASKTE--PKNPPEEFICPISGSLMADPVIVSSSQTFERACVQAC 405
G+GK RWKIS Y S ++T+ + PP+EFICPISGSLM DPV+VSS QTFER VQ C
Sbjct: 3 GNGKRRWKISFYSRSKPTQTQHQQQQPPKEFICPISGSLMFDPVVVSSGQTFERLSVQVC 62
Query: 406 KTL 414
L
Sbjct: 63 HDL 65
>gb|EXB42062.1| U-box domain-containing protein 38 [Morus notabilis]
Length = 549
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 12/73 (16%)
Frame = +1
Query: 232 GSGKHRWKISIYRSSSASKT------------EPKNPPEEFICPISGSLMADPVIVSSSQ 375
G+GKHRWKIS +R SS+S + + + PP++F+CPI G+LMADPV+VSS Q
Sbjct: 3 GNGKHRWKISFHRPSSSSSSSKMEANHHNHHKQQEEPPKDFLCPIYGALMADPVVVSSGQ 62
Query: 376 TFERACVQACKTL 414
TFER VQ C+ L
Sbjct: 63 TFERLSVQLCRNL 75
>dbj|BAB10895.1| unnamed protein product [Arabidopsis thaliana]
Length = 540
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/65 (58%), Positives = 49/65 (75%), Gaps = 5/65 (7%)
Frame = +1
Query: 235 SGKHRWKISIYRSSSASKTEPKNP-----PEEFICPISGSLMADPVIVSSSQTFERACVQ 399
+GK +W+ S+ RSSS+S + +P P EF+CPISGSLMADP+IVSS ++ERACV
Sbjct: 20 AGKSKWRTSLSRSSSSSSSNNNSPTKTEIPAEFLCPISGSLMADPIIVSSGHSYERACVI 79
Query: 400 ACKTL 414
ACKTL
Sbjct: 80 ACKTL 84
>ref|XP_002318018.2| hypothetical protein POPTR_0012s07790g [Populus trichocarpa]
gi|550326606|gb|EEE96238.2| hypothetical protein
POPTR_0012s07790g [Populus trichocarpa]
Length = 546
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/66 (56%), Positives = 47/66 (71%)
Frame = +1
Query: 217 PDTQMGSGKHRWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACV 396
P G+GK RW IS Y S ++T+ + PP+EF+CPI GSLM+DPV+VSS QTFER V
Sbjct: 26 PQAMGGNGKRRWNISFYSRSKTTQTQ-QLPPKEFLCPIYGSLMSDPVVVSSGQTFERLSV 84
Query: 397 QACKTL 414
Q C+ L
Sbjct: 85 QVCRDL 90
>ref|NP_198830.1| armadillo/beta-catenin repeat and RING/U-box domain-containing
protein [Arabidopsis thaliana]
gi|334302849|sp|Q9FL17.2|PUB40_ARATH RecName: Full=U-box
domain-containing protein 40; AltName: Full=Plant U-box
protein 40 gi|332007129|gb|AED94512.1|
armadillo/beta-catenin repeat and RING/U-box
domain-containing protein [Arabidopsis thaliana]
Length = 550
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/65 (58%), Positives = 49/65 (75%), Gaps = 5/65 (7%)
Frame = +1
Query: 235 SGKHRWKISIYRSSSASKTEPKNP-----PEEFICPISGSLMADPVIVSSSQTFERACVQ 399
+GK +W+ S+ RSSS+S + +P P EF+CPISGSLMADP+IVSS ++ERACV
Sbjct: 30 AGKSKWRTSLSRSSSSSSSNNNSPTKTEIPAEFLCPISGSLMADPIIVSSGHSYERACVI 89
Query: 400 ACKTL 414
ACKTL
Sbjct: 90 ACKTL 94
>ref|XP_006439742.1| hypothetical protein CICLE_v10019643mg [Citrus clementina]
gi|557542004|gb|ESR52982.1| hypothetical protein
CICLE_v10019643mg [Citrus clementina]
Length = 537
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/62 (58%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = +1
Query: 232 GSGKH-RWKISIYRSSSASKTEPKNPPEEFICPISGSLMADPVIVSSSQTFERACVQACK 408
G+GKH RWKIS + S+++ PK+PP+EF+CP+SGSLM DPV+VS+ QTF+R VQ C+
Sbjct: 3 GNGKHHRWKISFFHRSNSN---PKHPPKEFLCPVSGSLMFDPVVVSTGQTFDRVSVQVCR 59
Query: 409 TL 414
L
Sbjct: 60 EL 61