BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00017815
         (221 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]        56   6e-06

>gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1140

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = -3

Query: 213 CKHCKKFGHKEDNCWHKGKPQCFKCKRFGHVQRNCRFDNENEPSMAQV 70
           C +CKK  H +  CW++   QC  CK+FGHV + C+  N+N+P+ AQV
Sbjct: 258 CPYCKKTNHTDKFCWYRPGVQCKLCKQFGHVDKVCKI-NQNQPAQAQV 304