BLASTX nr result
ID: Rheum21_contig00017690
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00017690
(297 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 84 3e-14
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 81 2e-13
gb|AAL59229.1|AF448416_9 gag-pol [Zea mays] 81 2e-13
gb|ADB85273.1| putative retrotransposon protein [Phyllostachys e... 80 2e-13
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 80 2e-13
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 80 2e-13
gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subc... 80 4e-13
gb|AAY23262.1| retrotransposon protein, putative, Ty3-gypsy sub-... 79 5e-13
emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group] gi... 79 5e-13
gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subc... 79 6e-13
gb|ABA98150.1| retrotransposon protein, putative, Ty3-gypsy subc... 79 6e-13
gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subc... 79 6e-13
gb|AAX92863.1| retrotransposon protein, putative, Ty3-gypsy sub-... 79 6e-13
gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-... 79 6e-13
emb|CAE03840.1| OSJNBb0013J13.17 [Oryza sativa Japonica Group] 79 6e-13
emb|CAE01794.2| OSJNBa0039K24.13 [Oryza sativa Japonica Group] 79 6e-13
gb|ADB85355.1| putative retrotransposon protein [Phyllostachys e... 79 6e-13
emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group] 79 6e-13
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 79 6e-13
gb|ABA98065.2| retrotransposon protein, putative, Ty3-gypsy subc... 79 6e-13
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = -1
Query: 297 LDQIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAH 118
LD IR KQ +D VLV L ++ + + ++G LW+ DR+CVP VDGLRQ VM EAH
Sbjct: 666 LDDIRAKQDEDPVLVDLKRVAREKPTVGYQLDKNGHLWYGDRLCVPDVDGLRQQVMDEAH 725
Query: 117 SSAYSIHPGSSKMYK 73
A+++HPGS+KMY+
Sbjct: 726 KIAFAVHPGSTKMYR 740
>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIREKQ++D + ++ + KAP F E G++WF +RICVP L+Q ++KEAH S
Sbjct: 579 QIREKQLEDEDIKEIKKNMRRGKAPGFSEDEQGTVWFGNRICVPNQQELKQSILKEAHES 638
Query: 111 AYSIHPGSSKMYK 73
YSIHPGS+KMY+
Sbjct: 639 PYSIHPGSTKMYQ 651
>gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]
Length = 1470
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/74 (48%), Positives = 54/74 (72%)
Frame = -1
Query: 294 DQIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHS 115
++IR+ Q D + ++ + + KAP F E G++WF+ RICVP ++ LRQL+++EAH
Sbjct: 995 EEIRKGQESDEKIKEIKALIGLGKAPDFTEDEQGTIWFKKRICVPEIEHLRQLILREAHD 1054
Query: 114 SAYSIHPGSSKMYK 73
SAYSIHPGS+KMY+
Sbjct: 1055 SAYSIHPGSTKMYQ 1068
>gb|ADB85273.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 897
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q D L ++ + EKAP F E+G LWF +R+CVP ++QL++KE H S
Sbjct: 412 QIRENQATDKDLQEIKDNLKREKAPGFSEDEEGILWFGNRLCVPDCQAIKQLLLKETHES 471
Query: 111 AYSIHPGSSKMYK 73
YSIHPGS+KMY+
Sbjct: 472 HYSIHPGSTKMYQ 484
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/75 (48%), Positives = 54/75 (72%)
Frame = -1
Query: 297 LDQIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAH 118
+ +++EKQ D +L++L + V ++ F DG L +Q R+CVP VDGL++ VM+EAH
Sbjct: 1123 MSEVKEKQDQDPILLELKANVQKQRVLAFEQGGDGVLRYQGRLCVPMVDGLQERVMEEAH 1182
Query: 117 SSAYSIHPGSSKMYK 73
SS YS+HPGS+KMY+
Sbjct: 1183 SSRYSVHPGSTKMYR 1197
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/75 (48%), Positives = 54/75 (72%)
Frame = -1
Query: 297 LDQIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAH 118
+ +++EKQ D +L++L + V ++ F DG L +Q R+CVP VDGL++ VM+EAH
Sbjct: 1117 MSEVKEKQDQDPILLELKANVQKQRVLAFEQGGDGVLRYQGRLCVPMVDGLQERVMEEAH 1176
Query: 117 SSAYSIHPGSSKMYK 73
SS YS+HPGS+KMY+
Sbjct: 1177 SSRYSVHPGSTKMYR 1191
>gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/73 (52%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I E G++W RICVP LR L++KEAH S
Sbjct: 1313 QIREAQKDDEGIKELIKRIREKKDTNFSIDEQGTVWCGPRICVPAKKELRDLILKEAHES 1372
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 1373 AYSIHPGSTKMYQ 1385
>gb|AAY23262.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77548962|gb|ABA91759.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1416
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 1032 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGQRICVPTKKELRDLILKEAHES 1091
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 1092 AYSIHPGSTKMYQ 1104
>emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza
sativa Japonica Group]
Length = 1851
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 1380 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTIWCGPRICVPAKKELRNLILKEAHES 1439
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 1440 AYSIHPGSTKMYQ 1452
>gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1556
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 1101 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHES 1160
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 1161 AYSIHPGSTKMYQ 1173
>gb|ABA98150.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1480
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 1045 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHES 1104
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 1105 AYSIHPGSTKMYQ 1117
>gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1214
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 764 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHES 823
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 824 AYSIHPGSTKMYQ 836
>gb|AAX92863.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77549940|gb|ABA92737.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 495
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 24 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHES 83
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 84 AYSIHPGSTKMYQ 96
>gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77548823|gb|ABA91620.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1761
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 1290 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHES 1349
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 1350 AYSIHPGSTKMYQ 1362
>emb|CAE03840.1| OSJNBb0013J13.17 [Oryza sativa Japonica Group]
Length = 864
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 543 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHES 602
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 603 AYSIHPGSTKMYQ 615
>emb|CAE01794.2| OSJNBa0039K24.13 [Oryza sativa Japonica Group]
Length = 1851
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 1380 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHES 1439
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 1440 AYSIHPGSTKMYQ 1452
>gb|ADB85355.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1112
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/73 (49%), Positives = 47/73 (64%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q D + ++ + K F + + LW RICVP +DGLRQL++KEAH S
Sbjct: 673 QIREAQPKDYEFSNIKKKMAEGKFKDFTVDDQDILWINGRICVPDIDGLRQLILKEAHDS 732
Query: 111 AYSIHPGSSKMYK 73
YSIHPGS+KMY+
Sbjct: 733 KYSIHPGSTKMYQ 745
>emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
Length = 1851
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 1380 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHES 1439
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 1440 AYSIHPGSTKMYQ 1452
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/73 (46%), Positives = 54/73 (73%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
++++KQ D +L++L + V ++ F DG+L +Q R+CVP VDGL++ +M+EAHSS
Sbjct: 901 EVKKKQDQDPILLELKANVQKQRVLAFEQGGDGALRYQGRLCVPMVDGLQEKIMEEAHSS 960
Query: 111 AYSIHPGSSKMYK 73
YS+HPGS+KMY+
Sbjct: 961 RYSVHPGSTKMYR 973
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/73 (46%), Positives = 54/73 (73%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
++++KQ D +L++L + V ++ F DG+L +Q R+CVP VDGL++ +M+EAHSS
Sbjct: 2411 EVKKKQDQDPILLELKANVQKQRVLAFEQGGDGALRYQGRLCVPMVDGLQEKIMEEAHSS 2470
Query: 111 AYSIHPGSSKMYK 73
YS+HPGS+KMY+
Sbjct: 2471 RYSVHPGSTKMYR 2483
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/73 (46%), Positives = 54/73 (73%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
++++KQ D +L++L + V ++ F DG+L +Q R+CVP VDGL++ +M+EAHSS
Sbjct: 3921 EVKKKQDQDPILLELKANVQKQRVLAFEQGGDGALRYQGRLCVPMVDGLQEKIMEEAHSS 3980
Query: 111 AYSIHPGSSKMYK 73
YS+HPGS+KMY+
Sbjct: 3981 RYSVHPGSTKMYR 3993
>gb|ABA98065.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1686
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = -1
Query: 291 QIREKQVDDVVLVKLSSEVMDEKAPRFMIQEDGSLWFQDRICVPYVDGLRQLVMKEAHSS 112
QIRE Q DD + +L + ++K F I + G++W RICVP LR L++KEAH S
Sbjct: 1243 QIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHES 1302
Query: 111 AYSIHPGSSKMYK 73
AYSIHPGS+KMY+
Sbjct: 1303 AYSIHPGSTKMYQ 1315