BLASTX nr result
ID: Rheum21_contig00017540
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00017540 (229 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 103 2e-20 emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera] 102 4e-20 emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 102 5e-20 dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 100 3e-19 dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 100 3e-19 dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 100 3e-19 dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 100 3e-19 dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 100 3e-19 gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 100 3e-19 dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 100 3e-19 gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 100 3e-19 dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 100 3e-19 dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 100 3e-19 dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 100 3e-19 gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 100 3e-19 gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 99 5e-19 gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsi... 99 6e-19 emb|CAA16691.1| retrotransposon - like protein [Arabidopsis thal... 99 8e-19 dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 98 1e-18 dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 97 2e-18 >dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] Length = 1429 Score = 103 bits (258), Expect = 2e-20 Identities = 49/75 (65%), Positives = 58/75 (77%) Frame = +2 Query: 2 LKSNQVPVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LA 181 + VPVIYCDN GAT LCANPVFH RMK++ALDYHF+R +Q GA RV+H++ D LA Sbjct: 1343 ISQTTVPVIYCDNIGATYLCANPVFHSRMKHVALDYHFVRGYIQSGALRVSHVSTKDQLA 1402 Query: 182 DALTKPLTR*RYTML 226 DALTKPL R R+T L Sbjct: 1403 DALTKPLPRPRFTEL 1417 >emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera] Length = 569 Score = 102 bits (255), Expect = 4e-20 Identities = 49/71 (69%), Positives = 57/71 (80%) Frame = +2 Query: 14 QVPVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALT 193 Q PVIYCDN GAT LC+NPVFH RMK++ALDYHFIRE+VQ G RV+HI+ D LADALT Sbjct: 476 QQPVIYCDNVGATHLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISASDQLADALT 535 Query: 194 KPLTR*RYTML 226 KPL R ++ L Sbjct: 536 KPLARPQFNSL 546 >emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] Length = 478 Score = 102 bits (254), Expect = 5e-20 Identities = 49/71 (69%), Positives = 57/71 (80%) Frame = +2 Query: 14 QVPVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALT 193 Q PVIYCDN GAT LC+NPVFH RMK++ALDYHFIRE+VQ G RV+HI+ D LADALT Sbjct: 385 QQPVIYCDNVGATNLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISASDQLADALT 444 Query: 194 KPLTR*RYTML 226 KPL R ++ L Sbjct: 445 KPLARPQFDSL 455 >dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] Length = 1475 Score = 100 bits (248), Expect = 3e-19 Identities = 47/63 (74%), Positives = 52/63 (82%) Frame = +2 Query: 20 PVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKP 199 PVIYCDN GAT LCANPVFH RMK+IALDYHFIR +VQ GA RV H++ D LAD LTKP Sbjct: 1388 PVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKP 1447 Query: 200 LTR 208 L+R Sbjct: 1448 LSR 1450 >dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1| polyprotein [Arabidopsis thaliana] Length = 1330 Score = 100 bits (248), Expect = 3e-19 Identities = 47/63 (74%), Positives = 52/63 (82%) Frame = +2 Query: 20 PVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKP 199 PVIYCDN GAT LCANPVFH RMK+IALDYHFIR +VQ GA RV H++ D LAD LTKP Sbjct: 1243 PVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKP 1302 Query: 200 LTR 208 L+R Sbjct: 1303 LSR 1305 >dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] Length = 1475 Score = 100 bits (248), Expect = 3e-19 Identities = 47/63 (74%), Positives = 52/63 (82%) Frame = +2 Query: 20 PVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKP 199 PVIYCDN GAT LCANPVFH RMK+IALDYHFIR +VQ GA RV H++ D LAD LTKP Sbjct: 1388 PVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKP 1447 Query: 200 LTR 208 L+R Sbjct: 1448 LSR 1450 >dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] Length = 1475 Score = 100 bits (248), Expect = 3e-19 Identities = 47/63 (74%), Positives = 52/63 (82%) Frame = +2 Query: 20 PVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKP 199 PVIYCDN GAT LCANPVFH RMK+IALDYHFIR +VQ GA RV H++ D LAD LTKP Sbjct: 1388 PVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKP 1447 Query: 200 LTR 208 L+R Sbjct: 1448 LSR 1450 >dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] Length = 1475 Score = 100 bits (248), Expect = 3e-19 Identities = 47/63 (74%), Positives = 52/63 (82%) Frame = +2 Query: 20 PVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKP 199 PVIYCDN GAT LCANPVFH RMK+IALDYHFIR +VQ GA RV H++ D LAD LTKP Sbjct: 1388 PVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKP 1447 Query: 200 LTR 208 L+R Sbjct: 1448 LSR 1450 >gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana] gi|7269781|emb|CAB77781.1| putative polyprotein of LTR transposon [Arabidopsis thaliana] Length = 1456 Score = 100 bits (248), Expect = 3e-19 Identities = 47/63 (74%), Positives = 52/63 (82%) Frame = +2 Query: 20 PVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKP 199 PVIYCDN GAT LCANPVFH RMK+IALDYHFIR +VQ GA RV H++ D LAD LTKP Sbjct: 1369 PVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKP 1428 Query: 200 LTR 208 L+R Sbjct: 1429 LSR 1431 >dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] Length = 1431 Score = 99.8 bits (247), Expect = 3e-19 Identities = 46/69 (66%), Positives = 55/69 (79%) Frame = +2 Query: 2 LKSNQVPVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LA 181 ++ + PVIYCDN GAT LCANPVFH RMK+IA+DYHFIR +VQ GA RV H++ D LA Sbjct: 1345 IRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLA 1404 Query: 182 DALTKPLTR 208 D LTKPL+R Sbjct: 1405 DTLTKPLSR 1413 >gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana] gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis thaliana] Length = 1466 Score = 99.8 bits (247), Expect = 3e-19 Identities = 46/69 (66%), Positives = 55/69 (79%) Frame = +2 Query: 2 LKSNQVPVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LA 181 ++ + PVIYCDN GAT LCANPVFH RMK+IA+DYHFIR +VQ GA RV H++ D LA Sbjct: 1380 IRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLA 1439 Query: 182 DALTKPLTR 208 D LTKPL+R Sbjct: 1440 DTLTKPLSR 1448 >dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1| polyprotein [Arabidopsis thaliana] gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis thaliana] gi|338746557|dbj|BAK41508.1| polyprotein [Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1| polyprotein [Arabidopsis thaliana] Length = 1447 Score = 99.8 bits (247), Expect = 3e-19 Identities = 46/69 (66%), Positives = 55/69 (79%) Frame = +2 Query: 2 LKSNQVPVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LA 181 ++ + PVIYCDN GAT LCANPVFH RMK+IA+DYHFIR +VQ GA RV H++ D LA Sbjct: 1361 IRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLA 1420 Query: 182 DALTKPLTR 208 D LTKPL+R Sbjct: 1421 DTLTKPLSR 1429 >dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] Length = 1466 Score = 99.8 bits (247), Expect = 3e-19 Identities = 46/69 (66%), Positives = 55/69 (79%) Frame = +2 Query: 2 LKSNQVPVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LA 181 ++ + PVIYCDN GAT LCANPVFH RMK+IA+DYHFIR +VQ GA RV H++ D LA Sbjct: 1380 IRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLA 1439 Query: 182 DALTKPLTR 208 D LTKPL+R Sbjct: 1440 DTLTKPLSR 1448 >dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] Length = 1447 Score = 99.8 bits (247), Expect = 3e-19 Identities = 46/69 (66%), Positives = 55/69 (79%) Frame = +2 Query: 2 LKSNQVPVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LA 181 ++ + PVIYCDN GAT LCANPVFH RMK+IA+DYHFIR +VQ GA RV H++ D LA Sbjct: 1361 IRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLA 1420 Query: 182 DALTKPLTR 208 D LTKPL+R Sbjct: 1421 DTLTKPLSR 1429 >gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana] gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis thaliana] Length = 1466 Score = 99.8 bits (247), Expect = 3e-19 Identities = 46/69 (66%), Positives = 55/69 (79%) Frame = +2 Query: 2 LKSNQVPVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LA 181 ++ + PVIYCDN GAT LCANPVFH RMK+IA+DYHFIR +VQ GA RV H++ D LA Sbjct: 1380 IRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLA 1439 Query: 182 DALTKPLTR 208 D LTKPL+R Sbjct: 1440 DTLTKPLSR 1448 >gb|AAC02664.1| polyprotein [Arabidopsis thaliana] Length = 1451 Score = 99.4 bits (246), Expect = 5e-19 Identities = 47/70 (67%), Positives = 55/70 (78%) Frame = +2 Query: 20 PVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKP 199 PV+YCDN GAT L ANPVFH RMK+IALD+HF+RE VQ GA RV H++ D LADALTKP Sbjct: 1371 PVVYCDNVGATYLSANPVFHSRMKHIALDFHFVRESVQAGALRVTHVSTKDQLADALTKP 1430 Query: 200 LTR*RYTMLL 229 L R +T L+ Sbjct: 1431 LPRQPFTTLI 1440 >gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 387 Score = 99.0 bits (245), Expect = 6e-19 Identities = 45/69 (65%), Positives = 55/69 (79%) Frame = +2 Query: 20 PVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKP 199 PV+YCDN GAT LCANPVFH +MK++ALDYHF+R +Q GA RV+H++ D LADALTKP Sbjct: 307 PVVYCDNMGATYLCANPVFHSKMKHVALDYHFVRGNIQTGALRVSHLSTKDQLADALTKP 366 Query: 200 LTR*RYTML 226 L R R+ L Sbjct: 367 LHRPRFQEL 375 >emb|CAA16691.1| retrotransposon - like protein [Arabidopsis thaliana] gi|10177325|dbj|BAB10674.1| copia-like retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1021 Score = 98.6 bits (244), Expect = 8e-19 Identities = 48/69 (69%), Positives = 54/69 (78%) Frame = +2 Query: 20 PVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKP 199 PV+YCDN GAT LCANPVFH RMK+IA+DYHFIR +VQ G RVAH+ D LADALTKP Sbjct: 230 PVVYCDNVGATFLCANPVFHSRMKHIAIDYHFIRGQVQQGILRVAHVNTRDQLADALTKP 289 Query: 200 LTR*RYTML 226 L R +T L Sbjct: 290 LPRNHFTEL 298 >dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1| polyprotein [Arabidopsis thaliana] Length = 1475 Score = 98.2 bits (243), Expect = 1e-18 Identities = 46/62 (74%), Positives = 51/62 (82%) Frame = +2 Query: 20 PVIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKP 199 PVIYCDN GAT LCANPVFH RMK+IALDYHFIR +VQ GA RV H++ D LAD LTKP Sbjct: 1388 PVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKP 1447 Query: 200 LT 205 L+ Sbjct: 1448 LS 1449 >dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] Length = 1475 Score = 97.4 bits (241), Expect = 2e-18 Identities = 46/62 (74%), Positives = 51/62 (82%) Frame = +2 Query: 23 VIYCDNGGATRLCANPVFHLRMKNIALDYHFIREKVQIGAFRVAHIANDD*LADALTKPL 202 VIYCDN GAT LCANPVFH RMK+IALDYHFIR +VQ GA RV H++ D LAD LTKPL Sbjct: 1389 VIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1448 Query: 203 TR 208 +R Sbjct: 1449 SR 1450