BLASTX nr result
ID: Rheum21_contig00017527
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00017527
(276 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia... 84 1e-14
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 81 1e-13
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 81 1e-13
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 81 1e-13
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana] 81 1e-13
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 81 1e-13
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 81 1e-13
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 81 1e-13
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 81 1e-13
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 81 1e-13
ref|XP_004246220.1| PREDICTED: uncharacterized protein LOC101249... 81 2e-13
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 80 4e-13
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 80 4e-13
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 80 4e-13
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 80 4e-13
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 80 4e-13
emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera] 80 4e-13
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 80 4e-13
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera] 79 6e-13
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 79 8e-13
>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268438|emb|CAB80958.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1474
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI IDY FVR ++ G+L V HV DQ+AD TK + +HF
Sbjct: 1400 NIGATYLCANPVFHSRMKHIAIDYHFVRNMIQSGALRVSHVSTRDQLADALTKPLSRAHF 1459
Query: 77 QTLRSKLHVRPPP 39
Q+ R K+ VR P
Sbjct: 1460 QSARFKIGVRQLP 1472
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI +DY F+R QV+ G+L V HV DQ+AD TK + F
Sbjct: 1394 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1453
Query: 77 QTLRSKLHVRPPP*ACGG 24
Q K+ V P +CGG
Sbjct: 1454 QNFSRKIGVIKVPPSCGG 1471
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI +DY F+R QV+ G+L V HV DQ+AD TK + F
Sbjct: 1249 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1308
Query: 77 QTLRSKLHVRPPP*ACGG 24
Q K+ V P +CGG
Sbjct: 1309 QNFSRKIGVIKVPPSCGG 1326
>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI +DY F+R QV+ G+L V HV DQ+AD TK + F
Sbjct: 1394 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1453
Query: 77 QTLRSKLHVRPPP*ACGG 24
Q K+ V P +CGG
Sbjct: 1454 QNFSRKIGVIKVPPSCGG 1471
>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI +DY F+R QV+ G+L V HV DQ+AD TK + F
Sbjct: 1394 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1453
Query: 77 QTLRSKLHVRPPP*ACGG 24
Q K+ V P +CGG
Sbjct: 1454 QNFSRKIGVIKVPPSCGG 1471
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI +DY F+R QV+ G+L V HV DQ+AD TK + F
Sbjct: 1394 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1453
Query: 77 QTLRSKLHVRPPP*ACGG 24
Q K+ V P +CGG
Sbjct: 1454 QNFSRKIGVIKVPPSCGG 1471
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI +DY F+R QV+ G+L V HV DQ+AD TK + F
Sbjct: 1394 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1453
Query: 77 QTLRSKLHVRPPP*ACGG 24
Q K+ V P +CGG
Sbjct: 1454 QNFSRKIGVIKVPPSCGG 1471
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI +DY F+R QV+ G+L V HV DQ+AD TK + F
Sbjct: 1394 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSLVAF 1453
Query: 77 QTLRSKLHVRPPP*ACGG 24
Q K+ V P +CGG
Sbjct: 1454 QNFSRKIGVIKVPPSCGG 1471
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI +DY F+R QV+ G+L V HV DQ+AD TK + F
Sbjct: 1394 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1453
Query: 77 QTLRSKLHVRPPP*ACGG 24
Q K+ V P +CGG
Sbjct: 1454 QNFSRKIGVIKVPPSCGG 1471
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI +DY F+R QV+ G+L V HV DQ+AD TK + F
Sbjct: 1375 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1434
Query: 77 QTLRSKLHVRPPP*ACGG 24
Q K+ V P +CGG
Sbjct: 1435 QNFSRKIGVIKVPPSCGG 1452
>ref|XP_004246220.1| PREDICTED: uncharacterized protein LOC101249672 [Solanum
lycopersicum]
Length = 645
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/72 (55%), Positives = 51/72 (70%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+SA Y+ AN VFHQ SKHI+IDY F RE+V G L V+++ + DQ AD+FTKA+ + F
Sbjct: 177 NISAIYLTANRVFHQRSKHIEIDYHFFREKVARGQLCVKYIPSTDQTADVFTKALSSPRF 236
Query: 77 QTLRSKLHVRPP 42
LRSKL V P
Sbjct: 237 AHLRSKLTVSKP 248
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI IDY F+R QV+ G+L V HV DQ+AD TK + + F
Sbjct: 1357 NVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1416
Query: 77 QTLRSKLHV-RPPP 39
Q SK+ V R PP
Sbjct: 1417 QNFASKIGVTRVPP 1430
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI IDY F+R QV+ G+L V HV DQ+AD TK + + F
Sbjct: 1392 NVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1451
Query: 77 QTLRSKLHV-RPPP 39
Q SK+ V R PP
Sbjct: 1452 QNFASKIGVTRVPP 1465
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI IDY F+R QV+ G+L V HV DQ+AD TK + + F
Sbjct: 1373 NVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1432
Query: 77 QTLRSKLHV-RPPP 39
Q SK+ V R PP
Sbjct: 1433 QNFASKIGVTRVPP 1446
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI IDY F+R QV+ G+L V HV DQ+AD TK + + F
Sbjct: 1392 NVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1451
Query: 77 QTLRSKLHV-RPPP 39
Q SK+ V R PP
Sbjct: 1452 QNFASKIGVTRVPP 1465
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI IDY F+R QV+ G+L V HV DQ+AD TK + + F
Sbjct: 1373 NVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1432
Query: 77 QTLRSKLHV-RPPP 39
Q SK+ V R PP
Sbjct: 1433 QNFASKIGVTRVPP 1446
>emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera]
Length = 569
Score = 79.7 bits (195), Expect = 4e-13
Identities = 34/73 (46%), Positives = 51/73 (69%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ AT++C+NPVFH KH+ +DY F+REQV++G L V H+ A DQ+AD TK + F
Sbjct: 484 NVGATHLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISASDQLADALTKPLARPQF 543
Query: 77 QTLRSKLHVRPPP 39
+L++K+ + P P
Sbjct: 544 NSLKAKIGLAPRP 556
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI IDY F+R QV+ G+L V HV DQ+AD TK + + F
Sbjct: 1392 NVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1451
Query: 77 QTLRSKLHV-RPPP 39
Q SK+ V R PP
Sbjct: 1452 QNFASKIGVTRVPP 1465
>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
Length = 431
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
NLS TY+ ANP+ H +KH++IDY FVRE+V +L VR + + DQ+ADI TK++ T HF
Sbjct: 249 NLSTTYLAANPILHSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKSLSTQHF 308
Query: 77 QTLRSKLHVRPPP 39
LRSKL V P
Sbjct: 309 LHLRSKLTVLSRP 321
>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
gi|225898008|dbj|BAH30336.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1459
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/73 (50%), Positives = 48/73 (65%)
Frame = -2
Query: 257 NLSATYMCANPVFHQWSKHIKIDYCFVREQVEDGSLIVRHVRALDQIADIFTKAVETSHF 78
N+ ATY+CANPVFH KHI +DY FVR ++ +L V HV DQ+AD TK++ HF
Sbjct: 1385 NIGATYICANPVFHSRMKHIALDYHFVRGMIQSRALRVSHVSTNDQLADALTKSLSRPHF 1444
Query: 77 QTLRSKLHVRPPP 39
+ RSK+ VR P
Sbjct: 1445 LSARSKIGVRQLP 1457