BLASTX nr result
ID: Rheum21_contig00017390
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00017390
(294 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW16746.1| hypothetical protein PHAVU_007G181700g [Phaseolus... 92 7e-17
gb|ESW16745.1| hypothetical protein PHAVU_007G181700g [Phaseolus... 92 7e-17
ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago... 86 4e-15
ref|XP_006298222.1| hypothetical protein CARUB_v10014280mg [Caps... 86 7e-15
gb|EXB56542.1| DNA excision repair protein ERCC-1 [Morus notabilis] 85 9e-15
ref|XP_004495745.1| PREDICTED: DNA excision repair protein ERCC-... 84 2e-14
gb|EOY11410.1| DNA excision repair protein ERCC-1 isoform 2 [The... 84 3e-14
gb|EOY11409.1| DNA excision repair protein ERCC-1 isoform 1 [The... 84 3e-14
ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis... 84 3e-14
ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-... 82 6e-14
ref|XP_006408101.1| hypothetical protein EUTSA_v10020823mg [Eutr... 82 1e-13
ref|XP_006589150.1| PREDICTED: DNA excision repair protein ERCC-... 80 2e-13
gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus pe... 79 6e-13
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|5... 79 6e-13
ref|XP_002882403.1| hypothetical protein ARALYDRAFT_477808 [Arab... 78 1e-12
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-... 75 9e-12
ref|XP_006345166.1| PREDICTED: DNA excision repair protein ERCC-... 72 1e-10
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,... 70 4e-10
ref|XP_004235989.1| PREDICTED: DNA excision repair protein ERCC-... 67 2e-09
ref|XP_006471950.1| PREDICTED: DNA excision repair protein ERCC-... 62 6e-08
>gb|ESW16746.1| hypothetical protein PHAVU_007G181700g [Phaseolus vulgaris]
Length = 276
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPPPPTQ 129
KS++ I IPSYQEV+ESSQ+KST PSLF PSQ+FSQAFAS+K+SEFY+PPPPP Q
Sbjct: 18 KSSVVIRIPSYQEVVESSQAKSTPPSLFLPSQSFSQAFASVKSSEFYAPPPPPPQ 72
>gb|ESW16745.1| hypothetical protein PHAVU_007G181700g [Phaseolus vulgaris]
Length = 393
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPPPPTQ 129
KS++ I IPSYQEV+ESSQ+KST PSLF PSQ+FSQAFAS+K+SEFY+PPPPP Q
Sbjct: 18 KSSVVIRIPSYQEVVESSQAKSTPPSLFLPSQSFSQAFASVKSSEFYAPPPPPPQ 72
>ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
gi|355480123|gb|AES61326.1| DNA excision repair protein
ERCC-1 [Medicago truncatula]
Length = 401
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 6/67 (8%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPP------PPT 132
KS+ I IPSYQEV+ESSQ+KST PSLF PSQTFSQAFA +K+SEFYSPPP P+
Sbjct: 15 KSSTVIRIPSYQEVIESSQTKSTPPSLFVPSQTFSQAFAFVKSSEFYSPPPSLPKENAPS 74
Query: 131 QRAVSTP 111
+ STP
Sbjct: 75 NASSSTP 81
>ref|XP_006298222.1| hypothetical protein CARUB_v10014280mg [Capsella rubella]
gi|482566931|gb|EOA31120.1| hypothetical protein
CARUB_v10014280mg [Capsella rubella]
Length = 298
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPPPP 135
K+ I I +PSYQEVLESSQ+KST PSLF PSQTFSQAFA +K+S+ YSPPPPP
Sbjct: 23 KTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQTFSQAFAFVKSSDVYSPPPPP 75
>gb|EXB56542.1| DNA excision repair protein ERCC-1 [Morus notabilis]
Length = 407
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = -2
Query: 284 ITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPPPPTQRAVST 114
+ I+IPSYQEVL++SQ KST PSLFAPSQTFSQAFA +K+SEFYSPPPP + A ++
Sbjct: 24 VVIKIPSYQEVLKTSQWKSTPPSLFAPSQTFSQAFAFVKSSEFYSPPPPSSTSAAAS 80
>ref|XP_004495745.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cicer
arietinum]
Length = 652
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPP 141
KS++ I IPSYQEV+ESSQ+KST PSLF PSQTFS+AFA +K+SEFYSPPP
Sbjct: 273 KSSVVIRIPSYQEVVESSQAKSTPPSLFIPSQTFSEAFAFVKSSEFYSPPP 323
>gb|EOY11410.1| DNA excision repair protein ERCC-1 isoform 2 [Theobroma cacao]
Length = 398
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/64 (67%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSP---PPPPTQRA 123
K+ I I IPSY+EV+ESSQ KST PSLF PSQ+FSQAF IK+SEFYSP PP P+ A
Sbjct: 16 KTPIVIGIPSYKEVIESSQIKSTPPSLFTPSQSFSQAFNFIKSSEFYSPPPAPPAPSSAA 75
Query: 122 VSTP 111
+STP
Sbjct: 76 ISTP 79
>gb|EOY11409.1| DNA excision repair protein ERCC-1 isoform 1 [Theobroma cacao]
Length = 409
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/64 (67%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSP---PPPPTQRA 123
K+ I I IPSY+EV+ESSQ KST PSLF PSQ+FSQAF IK+SEFYSP PP P+ A
Sbjct: 16 KTPIVIGIPSYKEVIESSQIKSTPPSLFTPSQSFSQAFNFIKSSEFYSPPPAPPAPSSAA 75
Query: 122 VSTP 111
+STP
Sbjct: 76 ISTP 79
>ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis thaliana]
gi|55976606|sp|Q9MA98.1|ERCC1_ARATH RecName: Full=DNA
excision repair protein ERCC-1; Short=AtERCC1;
Short=AtRAD10; AltName: Full=Ultraviolet hypersensitive
7 gi|6729031|gb|AAF27027.1|AC009177_17 putative
nucleotide repair protein [Arabidopsis thaliana]
gi|9800490|gb|AAF99316.1|AF276082_1 ERCC1 [Arabidopsis
thaliana] gi|15215614|gb|AAK91352.1| AT3g05210/T12H1_18
[Arabidopsis thaliana] gi|21435979|gb|AAM51569.1|
AT3g05210/T12H1_18 [Arabidopsis thaliana]
gi|21618171|gb|AAM67221.1| putative nucleotide repair
protein [Arabidopsis thaliana]
gi|332640684|gb|AEE74205.1| DNA excision repair protein
ERCC-1 [Arabidopsis thaliana]
Length = 410
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPPPPTQRAVST 114
K+ I I +PSYQEVLESSQ+KST PSLF PSQ+FSQAFA +K+S+ YSPPPP + A S+
Sbjct: 23 KTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPPSSAAASSS 82
Query: 113 -PGG 105
P G
Sbjct: 83 QPSG 86
>ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-1-like [Fragaria vesca
subsp. vesca]
Length = 380
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPPP 138
K+ I+IPS+QEV+ESSQSKST PSLFAPS+TFSQAFA +K+SEFYSPP P
Sbjct: 16 KNKTVIKIPSFQEVIESSQSKSTPPSLFAPSKTFSQAFAFVKSSEFYSPPKP 67
>ref|XP_006408101.1| hypothetical protein EUTSA_v10020823mg [Eutrema salsugineum]
gi|557109247|gb|ESQ49554.1| hypothetical protein
EUTSA_v10020823mg [Eutrema salsugineum]
Length = 413
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYS--PPPPPTQRAV 120
K+ I I +PSYQEVLESSQ+KST PSLF PSQ+FSQAFA +K+S+ YS PPPPP +
Sbjct: 23 KTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSAPPPPPPPPSSA 82
Query: 119 STP 111
++P
Sbjct: 83 ASP 85
>ref|XP_006589150.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
Length = 393
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/51 (72%), Positives = 45/51 (88%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPP 141
KS++ I IPSYQEV+ESSQ+KST SLF PSQTFS+AFA +K+S+FYSPPP
Sbjct: 16 KSSVVIRIPSYQEVVESSQAKSTPSSLFVPSQTFSEAFAFVKSSDFYSPPP 66
>gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus persica]
Length = 398
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPPPP 135
K I+IPS+QEVLES+QSKST SLF PSQ+FSQAFA +K+SEFYS PPPP
Sbjct: 18 KKKTVIKIPSFQEVLESAQSKSTPLSLFTPSQSFSQAFAFVKSSEFYSSPPPP 70
>ref|XP_002328427.1| predicted protein [Populus trichocarpa]
gi|566169303|ref|XP_006382624.1| hypothetical protein
POPTR_0005s03890g [Populus trichocarpa]
gi|550337988|gb|ERP60421.1| hypothetical protein
POPTR_0005s03890g [Populus trichocarpa]
Length = 382
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Frame = -2
Query: 284 ITIEIPSYQEVLESSQSKSTAP---SLFAPSQTFSQAFASIKNSEFYSPPPPPTQRAVST 114
+ I+IPSYQEV+ESSQ K T SLF PSQTFSQAF+ IKNSEFYSPPPPP ++
Sbjct: 21 VLIQIPSYQEVIESSQVKPTQTQESSLFKPSQTFSQAFSFIKNSEFYSPPPPPPSKSEHG 80
Query: 113 P 111
P
Sbjct: 81 P 81
>ref|XP_002882403.1| hypothetical protein ARALYDRAFT_477808 [Arabidopsis lyrata subsp.
lyrata] gi|297328243|gb|EFH58662.1| hypothetical protein
ARALYDRAFT_477808 [Arabidopsis lyrata subsp. lyrata]
Length = 407
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPPPPTQRAVST 114
K+ I I +PSYQEV+ESSQ+KST PSLF PSQ+FSQAFA +K+S+ YSPPP + + S+
Sbjct: 23 KTQIIIGVPSYQEVIESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPSSSAASSSS 82
>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
gi|296088298|emb|CBI36743.3| unnamed protein product
[Vitis vinifera]
Length = 398
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPPPPT 132
KS+I I+IPSYQEVLESSQSK+T+ SLF PS +FSQAF+ +K+S+ Y+PPPP T
Sbjct: 19 KSSIVIKIPSYQEVLESSQSKTTS-SLFTPSPSFSQAFSFVKSSQSYTPPPPAT 71
>ref|XP_006345166.1| PREDICTED: DNA excision repair protein ERCC-1-like [Solanum
tuberosum]
Length = 392
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/63 (58%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESS-QSKSTAPS--LFAPSQTFSQAFASIKNSEFYSPPPPPTQRA 123
K + I+IPSY+EV+ESS QSK+T+ S LF P+ +FSQAF +KNSEFYSPPPPP +
Sbjct: 12 KKSFVIQIPSYEEVMESSSQSKTTSSSSSLFNPTPSFSQAFKFVKNSEFYSPPPPPNTQP 71
Query: 122 VST 114
S+
Sbjct: 72 SSS 74
>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
communis] gi|223548305|gb|EEF49796.1| excision repair
cross-complementing 1 ercc1, putative [Ricinus communis]
Length = 392
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/48 (70%), Positives = 41/48 (85%)
Frame = -2
Query: 284 ITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPP 141
+ I+IPSYQEV+ESSQ+ T SLF PSQTFSQAF+ IK+SEFY+PPP
Sbjct: 22 VVIQIPSYQEVIESSQNPKTE-SLFKPSQTFSQAFSFIKDSEFYTPPP 68
>ref|XP_004235989.1| PREDICTED: DNA excision repair protein ERCC-1-like [Solanum
lycopersicum]
Length = 390
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/62 (54%), Positives = 47/62 (75%), Gaps = 3/62 (4%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLE-SSQSK--STAPSLFAPSQTFSQAFASIKNSEFYSPPPPPTQRA 123
K + I+IPSY+EV+E SSQ K S++ SLF P+ +FSQAF +KNSEFYSPPPP + ++
Sbjct: 12 KKSFVIQIPSYEEVMECSSQPKTASSSSSLFNPTPSFSQAFKFVKNSEFYSPPPPSSSQS 71
Query: 122 VS 117
+
Sbjct: 72 AT 73
>ref|XP_006471950.1| PREDICTED: DNA excision repair protein ERCC-1-like [Citrus
sinensis]
Length = 394
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = -2
Query: 293 KSAITIEIPSYQEVLESSQSKSTAPSLFAPSQTFSQAFASIKNSEFYSPPPPPTQRAVST 114
K I IPSYQEV+ ++ +LF PSQ+FSQAF+ IK+SEFY+PPPPP +T
Sbjct: 19 KKKTIITIPSYQEVINATNPPQ---NLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTT 75