BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00017378
         (653 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containi...   115   1e-23
ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containi...   115   1e-23
ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat...   111   2e-22
ref|XP_002530608.1| pentatricopeptide repeat-containing protein,...   110   4e-22
ref|XP_003546958.1| PREDICTED: pentatricopeptide repeat-containi...   108   1e-21
ref|NP_201383.1| pentatricopeptide repeat-containing protein [Ar...   108   2e-21
emb|CAA16678.1| predicted protein [Arabidopsis thaliana]              108   2e-21
ref|XP_002866691.1| pentatricopeptide repeat-containing protein ...   107   2e-21
ref|XP_006595472.1| PREDICTED: putative pentatricopeptide repeat...   106   5e-21
gb|EXC12605.1| hypothetical protein L484_012982 [Morus notabilis]     103   3e-20
gb|EOX91773.1| Pentatricopeptide repeat (PPR) superfamily protei...   103   3e-20
ref|XP_006393982.1| hypothetical protein EUTSA_v10003830mg [Eutr...   103   6e-20
ref|XP_006348483.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
ref|XP_004513407.1| PREDICTED: putative pentatricopeptide repeat...    98   2e-18
ref|XP_006281497.1| hypothetical protein CARUB_v10027590mg [Caps...    98   2e-18
ref|XP_006466418.1| PREDICTED: putative pentatricopeptide repeat...    95   2e-17
ref|XP_002877696.1| pentatricopeptide repeat-containing protein ...    95   2e-17
ref|XP_006426145.1| hypothetical protein CICLE_v10025134mg [Citr...    94   3e-17
gb|EPS62602.1| hypothetical protein M569_12187, partial [Genlise...    92   2e-16
ref|NP_190542.4| pentatricopeptide repeat-containing protein [Ar...    91   2e-16

>ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 664

 Score =  115 bits (287), Expect = 1e-23
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = -1

Query: 245 SNQNGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLELALQESGIVM 66
           + + G G ++L + PH   ++DR+ DEF+ DVEK+YRILRKFH+RVPKLELALQESG++M
Sbjct: 70  TQRGGFGPIHLKTTPHES-AHDRDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIM 128

Query: 65  RAGMAERVLGRCGDAGNLAYR 3
           R+G+ ERVL RCGDAGNL YR
Sbjct: 129 RSGLPERVLSRCGDAGNLGYR 149


>ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 641

 Score =  115 bits (287), Expect = 1e-23
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = -1

Query: 245 SNQNGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLELALQESGIVM 66
           + + G G ++L + PH   ++DR+ DEF+ DVEK+YRILRKFH+RVPKLELALQESG++M
Sbjct: 47  TQRGGFGPIHLKTTPHES-AHDRDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIM 105

Query: 65  RAGMAERVLGRCGDAGNLAYR 3
           R+G+ ERVL RCGDAGNL YR
Sbjct: 106 RSGLPERVLSRCGDAGNLGYR 126


>ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Vitis vinifera]
          Length = 622

 Score =  111 bits (277), Expect = 2e-22
 Identities = 55/79 (69%), Positives = 64/79 (81%)
 Frame = -1

Query: 239 QNGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLELALQESGIVMRA 60
           + G GLV L S   N  +YD+  DEF+ADVEK+YRILRKFHSRVPKLELALQESG+ +R+
Sbjct: 30  RGGFGLVRLESNRENC-TYDQNYDEFSADVEKVYRILRKFHSRVPKLELALQESGVAVRS 88

Query: 59  GMAERVLGRCGDAGNLAYR 3
           G+ ERVL RCGDAGNL YR
Sbjct: 89  GLTERVLNRCGDAGNLGYR 107


>ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529856|gb|EEF31788.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 596

 Score =  110 bits (275), Expect = 4e-22
 Identities = 59/101 (58%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
 Frame = -1

Query: 296 YEPSISPRDHSHSDASYSNQNGIGLVYLNSMPHNGHSYDR---EVDEFAADVEKIYRILR 126
           Y+    P D +    S + +NG G+V L +  +N    D    +VDEFA DVEK+YRILR
Sbjct: 27  YQKGQEPIDRN--PLSNNLRNGFGVVCLKTQENNTSDRDNSSSKVDEFAKDVEKVYRILR 84

Query: 125 KFHSRVPKLELALQESGIVMRAGMAERVLGRCGDAGNLAYR 3
            FHSRVPKLELALQESG+ MRAG+ ERVL RCGDAGNL YR
Sbjct: 85  NFHSRVPKLELALQESGVTMRAGLTERVLNRCGDAGNLGYR 125


>ref|XP_003546958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like isoform X1 [Glycine max]
           gi|571514894|ref|XP_006597171.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g49730-like isoform X2 [Glycine max]
           gi|571514897|ref|XP_006597172.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g49730-like isoform X3 [Glycine max]
          Length = 654

 Score =  108 bits (270), Expect = 1e-21
 Identities = 55/91 (60%), Positives = 69/91 (75%), Gaps = 4/91 (4%)
 Frame = -1

Query: 263 HSDASYSNQ----NGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLE 96
           H ++++ N     N  GL+ L  +  N H+ D   DEFA+DVEK+YRILRK+HSRVPKLE
Sbjct: 52  HCNSTFDNHGCLTNQFGLIRLQEISIN-HTDDHTHDEFASDVEKVYRILRKYHSRVPKLE 110

Query: 95  LALQESGIVMRAGMAERVLGRCGDAGNLAYR 3
           LAL+ESG+V+R G+ ERVL RCGDAGNLAYR
Sbjct: 111 LALRESGVVVRPGLTERVLSRCGDAGNLAYR 141


>ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g65820 gi|9758569|dbj|BAB09050.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332010728|gb|AED98111.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  108 bits (269), Expect = 2e-21
 Identities = 54/83 (65%), Positives = 63/83 (75%)
 Frame = -1

Query: 251 SYSNQNGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLELALQESGI 72
           ++   NGIGLV L    HN  + + + DEFA+DVEK YRILRKFHSRVPKLELAL ESG+
Sbjct: 51  NFRRSNGIGLVCLEKS-HNDRTKNSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGV 109

Query: 71  VMRAGMAERVLGRCGDAGNLAYR 3
            +R G+ ERVL RCGDAGNL YR
Sbjct: 110 ELRPGLIERVLNRCGDAGNLGYR 132


>emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
          Length = 598

 Score =  108 bits (269), Expect = 2e-21
 Identities = 54/83 (65%), Positives = 63/83 (75%)
 Frame = -1

Query: 251 SYSNQNGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLELALQESGI 72
           ++   NGIGLV L    HN  + + + DEFA+DVEK YRILRKFHSRVPKLELAL ESG+
Sbjct: 44  NFRRSNGIGLVCLEKS-HNDRTKNSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGV 102

Query: 71  VMRAGMAERVLGRCGDAGNLAYR 3
            +R G+ ERVL RCGDAGNL YR
Sbjct: 103 ELRPGLIERVLNRCGDAGNLGYR 125


>ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312526|gb|EFH42950.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 638

 Score =  107 bits (268), Expect = 2e-21
 Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
 Frame = -1

Query: 251 SYSNQNGIGLVYLN-SMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLELALQESG 75
           ++   NGIGLV L  +  HN  + + + DEFA+DVEK YRILRKFHSRVPKLELAL ESG
Sbjct: 50  NFRRSNGIGLVCLEKNHNHNDRTKNSKYDEFASDVEKAYRILRKFHSRVPKLELALNESG 109

Query: 74  IVMRAGMAERVLGRCGDAGNLAYR 3
           + +R G+ ERVL RCGDAGNL YR
Sbjct: 110 VELRPGLIERVLNRCGDAGNLGYR 133


>ref|XP_006595472.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like, partial [Glycine max]
          Length = 656

 Score =  106 bits (265), Expect = 5e-21
 Identities = 54/90 (60%), Positives = 68/90 (75%), Gaps = 3/90 (3%)
 Frame = -1

Query: 263 HSDASYSNQ---NGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLEL 93
           H  +++ N    N  G + L  +  N H+ D+  DEFA+DVEK+YRILRK+HSRVPKLEL
Sbjct: 55  HFKSTFDNNALTNQFGFIRLQEISIN-HTDDQTHDEFASDVEKVYRILRKYHSRVPKLEL 113

Query: 92  ALQESGIVMRAGMAERVLGRCGDAGNLAYR 3
           AL+ESG+V+R G+ ERVL RCGDAGNLAYR
Sbjct: 114 ALRESGVVVRPGLTERVLNRCGDAGNLAYR 143


>gb|EXC12605.1| hypothetical protein L484_012982 [Morus notabilis]
          Length = 638

 Score =  103 bits (258), Expect = 3e-20
 Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
 Frame = -1

Query: 311 SDSPNYEPSI-SPRDHSHSDASYSNQ-NGIGLVYLNSMPHNGHSYDREVDEFAADVEKIY 138
           S  PN +P + SP+    S  +  N+  G   V+L   P      D   DEF+ DVEKIY
Sbjct: 20  SSQPNTKPYLLSPQTQFSSTQNPHNRATGFSPVHLEQNPVVSDD-DETHDEFSGDVEKIY 78

Query: 137 RILRKFHSRVPKLELALQESGIVMRAGMAERVLGRCGDAGNLAYR 3
           RILRKFHSRV KLELALQESG+V+R+G+ ERVLGRCGDAG+L YR
Sbjct: 79  RILRKFHSRVSKLELALQESGVVLRSGLTERVLGRCGDAGSLGYR 123


>gb|EOX91773.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 647

 Score =  103 bits (258), Expect = 3e-20
 Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 9/112 (8%)
 Frame = -1

Query: 311 SDSPN-YEPSISPRDHSHSDASYS-------NQNGIGLVYLNS-MPHNGHSYDREVDEFA 159
           S  PN Y   I P ++++++ S S       +++G GLV L +  P      D++ D+FA
Sbjct: 21  SSYPNTYHFHILPDNNNNNNNSNSLNLLSSNSKSGFGLVTLETKQPTLKSDNDQQTDDFA 80

Query: 158 ADVEKIYRILRKFHSRVPKLELALQESGIVMRAGMAERVLGRCGDAGNLAYR 3
           +DVEKIYRILRKFH+RVPKL LALQ+SG+V R G+ ERVL RCGDAGNL Y+
Sbjct: 81  SDVEKIYRILRKFHTRVPKLNLALQQSGVVFRPGLTERVLNRCGDAGNLGYK 132


>ref|XP_006393982.1| hypothetical protein EUTSA_v10003830mg [Eutrema salsugineum]
           gi|557090621|gb|ESQ31268.1| hypothetical protein
           EUTSA_v10003830mg [Eutrema salsugineum]
          Length = 620

 Score =  103 bits (256), Expect = 6e-20
 Identities = 52/83 (62%), Positives = 61/83 (73%)
 Frame = -1

Query: 251 SYSNQNGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLELALQESGI 72
           ++   NG GLV L+   H   + +   DEFA+DVEK YRILRKFHSRVPKLELAL ESG+
Sbjct: 44  NFRRSNGTGLVCLDKS-HKERTKNSNHDEFASDVEKAYRILRKFHSRVPKLELALNESGV 102

Query: 71  VMRAGMAERVLGRCGDAGNLAYR 3
            +R G+ ERVL RCGDAGNL YR
Sbjct: 103 ELRPGLIERVLNRCGDAGNLGYR 125


>ref|XP_006348483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Solanum tuberosum]
          Length = 625

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 HSHSDASYSNQNGIGLVYLNSMPHNGHSY-DREVDEFAADVEKIYRILRKFHSRVPKLEL 93
           H   + +Y +  G    +  S   +  ++ ++  DEF+ADVEK+YRILRKFHSRVPKLEL
Sbjct: 21  HISPENAYVSSKGKSFYHSESTLLSSSTFLNKNHDEFSADVEKVYRILRKFHSRVPKLEL 80

Query: 92  ALQESGIVMRAGMAERVLGRCGDAGNLAYR 3
           AL ESG+V R+G+ ERVL RCGDAGNL YR
Sbjct: 81  ALLESGVVARSGLTERVLNRCGDAGNLGYR 110


>ref|XP_004513407.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like isoform X1 [Cicer arietinum]
           gi|502165084|ref|XP_004513408.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g65820-like isoform X2 [Cicer arietinum]
          Length = 655

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 49/105 (46%), Positives = 74/105 (70%)
 Frame = -1

Query: 317 PQSDSPNYEPSISPRDHSHSDASYSNQNGIGLVYLNSMPHNGHSYDREVDEFAADVEKIY 138
           P + +PN++ +           + +  +  GL++L S  ++ +  + + DEF +DVEK+Y
Sbjct: 49  PPTPNPNFKTT-----------TITKNDQFGLIHLQSNANHFNDQNSD-DEFTSDVEKVY 96

Query: 137 RILRKFHSRVPKLELALQESGIVMRAGMAERVLGRCGDAGNLAYR 3
           RILRK+HSRVPKLELAL+ESG+V+ +G+ ERVL RCG++GNLAYR
Sbjct: 97  RILRKYHSRVPKLELALKESGVVVSSGLTERVLNRCGNSGNLAYR 141


>ref|XP_006281497.1| hypothetical protein CARUB_v10027590mg [Capsella rubella]
           gi|482550201|gb|EOA14395.1| hypothetical protein
           CARUB_v10027590mg [Capsella rubella]
          Length = 634

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 52/86 (60%), Positives = 60/86 (69%)
 Frame = -1

Query: 260 SDASYSNQNGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLELALQE 81
           S A   N    GLV L    HN  + + + D FA+DVE+ YRILRKFHSRVPKLELAL E
Sbjct: 44  SKALEGNFRTSGLVCLEKS-HNERTKNSKYDAFASDVERAYRILRKFHSRVPKLELALDE 102

Query: 80  SGIVMRAGMAERVLGRCGDAGNLAYR 3
           SG+ +R G+ ERVL RCGDAGNL YR
Sbjct: 103 SGVELRPGLIERVLNRCGDAGNLGYR 128


>ref|XP_006466418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Citrus sinensis]
          Length = 638

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 10/105 (9%)
 Frame = -1

Query: 287 SISPR-----DHSHSDASYSNQNGIGLVYLNSMPH-----NGHSYDREVDEFAADVEKIY 138
           S SPR      H  S A+ +NQ    LV L +        N        +EF+ DVEKI+
Sbjct: 19  SFSPRPNTTTSHVESTATTTNQLNSNLVCLKTKEDDCKCDNTTDTHGSHNEFSHDVEKIF 78

Query: 137 RILRKFHSRVPKLELALQESGIVMRAGMAERVLGRCGDAGNLAYR 3
           RIL+KFHSR+PKLELALQ SG+V+R G+ ERV+ RCGDAGNL YR
Sbjct: 79  RILKKFHSRLPKLELALQHSGVVLRPGLTERVINRCGDAGNLGYR 123


>ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323534|gb|EFH53955.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1188

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 49/83 (59%), Positives = 58/83 (69%)
 Frame = -1

Query: 251 SYSNQNGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLELALQESGI 72
           S   +NG+GLV+           ++  DEFA DVEKIYRILR +HSRVPKLEL+L ESGI
Sbjct: 47  STERKNGLGLVFP----------EKHEDEFAGDVEKIYRILRNYHSRVPKLELSLNESGI 96

Query: 71  VMRAGMAERVLGRCGDAGNLAYR 3
            +R G+  RVL RCGDAGNL YR
Sbjct: 97  DLRPGLIVRVLSRCGDAGNLGYR 119


>ref|XP_006426145.1| hypothetical protein CICLE_v10025134mg [Citrus clementina]
           gi|557528135|gb|ESR39385.1| hypothetical protein
           CICLE_v10025134mg [Citrus clementina]
          Length = 638

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 10/105 (9%)
 Frame = -1

Query: 287 SISPR-----DHSHSDASYSNQNGIGLVYLNSMP-----HNGHSYDREVDEFAADVEKIY 138
           S +PR      H  S A+ +NQ    LV L +       +N        +EF+ DVEKI+
Sbjct: 19  SFAPRPNTTTSHVESTATTTNQLNSNLVCLKTKEDDCKCNNTTDTHGSHNEFSHDVEKIF 78

Query: 137 RILRKFHSRVPKLELALQESGIVMRAGMAERVLGRCGDAGNLAYR 3
           RIL+KFHSR+PKLELALQ SG+V+R G+ ERV+ RCGDAGNL YR
Sbjct: 79  RILKKFHSRLPKLELALQHSGVVLRPGLTERVINRCGDAGNLGYR 123


>gb|EPS62602.1| hypothetical protein M569_12187, partial [Genlisea aurea]
          Length = 593

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 41/56 (73%), Positives = 51/56 (91%)
 Frame = -1

Query: 170 DEFAADVEKIYRILRKFHSRVPKLELALQESGIVMRAGMAERVLGRCGDAGNLAYR 3
           D+F+ADVEK+Y+ILRKF+S+VPKLELALQ SG+ +R+G+ ERVL RCGDAGNL YR
Sbjct: 29  DDFSADVEKVYKILRKFNSKVPKLELALQHSGVSVRSGLTERVLNRCGDAGNLGYR 84


>ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g49730 gi|332645062|gb|AEE78583.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 638

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 49/83 (59%), Positives = 56/83 (67%)
 Frame = -1

Query: 251 SYSNQNGIGLVYLNSMPHNGHSYDREVDEFAADVEKIYRILRKFHSRVPKLELALQESGI 72
           S   +NG+GLV            ++  DEFA +VEKIYRILR  HSRVPKLELAL ESGI
Sbjct: 44  STERKNGVGLV----------CPEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGI 93

Query: 71  VMRAGMAERVLGRCGDAGNLAYR 3
            +R G+  RVL RCGDAGNL YR
Sbjct: 94  DLRPGLIIRVLSRCGDAGNLGYR 116