BLASTX nr result
ID: Rheum21_contig00017269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00017269
(445 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519596.1| conserved hypothetical protein [Ricinus comm... 105 6e-21
ref|XP_006598549.1| PREDICTED: uncharacterized protein LOC100803... 77 3e-12
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 77 3e-12
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera] 76 4e-12
ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788... 76 5e-12
ref|XP_006603400.1| PREDICTED: uncharacterized protein LOC102659... 76 5e-12
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 76 5e-12
ref|XP_006605097.1| PREDICTED: uncharacterized protein LOC100803... 75 7e-12
ref|XP_006607055.1| PREDICTED: uncharacterized protein LOC100778... 75 9e-12
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 75 1e-11
emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera] 75 1e-11
gb|AAQ72729.1| putative gag-pol polyprotein [Petunia x hybrida] 75 1e-11
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum] 74 2e-11
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 74 3e-11
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 73 3e-11
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 73 4e-11
emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera] 72 8e-11
ref|XP_006575889.1| PREDICTED: uncharacterized protein LOC102669... 71 1e-10
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera] 71 2e-10
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 67 2e-09
>ref|XP_002519596.1| conserved hypothetical protein [Ricinus communis]
gi|223541228|gb|EEF42782.1| conserved hypothetical
protein [Ricinus communis]
Length = 177
Score = 105 bits (262), Expect = 6e-21
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = -1
Query: 445 LTVKEANLVDQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYG 266
LTVK+A+ DQRENLFHTRCLV T++LSVIID GSCCNI+NEKVV NLPT+PHPQ Y
Sbjct: 110 LTVKDASAGDQRENLFHTRCLVGTSSLSVIIDSGSCCNILNEKVVRVLNLPTSPHPQLYS 169
Query: 265 LQWI 254
LQWI
Sbjct: 170 LQWI 173
>ref|XP_006598549.1| PREDICTED: uncharacterized protein LOC100803523 [Glycine max]
Length = 459
Score = 76.6 bits (187), Expect = 3e-12
Identities = 29/55 (52%), Positives = 43/55 (78%)
Frame = -1
Query: 418 DQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
+QREN+FHTRC++ S+I+DGGSC N+ + ++V++ NL T PHP+PY LQW+
Sbjct: 382 NQRENIFHTRCIINGKLCSLIVDGGSCTNVASSRLVSNLNLETKPHPRPYKLQWL 436
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 76.6 bits (187), Expect = 3e-12
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = -1
Query: 439 VKEANLVDQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQ 260
VK+ ++ QREN+FHTRC + S+IIDGGSC N+ + +V NLPT HP+PY LQ
Sbjct: 334 VKKDDMEQQRENIFHTRCHINNKVCSMIIDGGSCANVASTTLVEKLNLPTLKHPRPYKLQ 393
Query: 259 WI 254
W+
Sbjct: 394 WL 395
>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
Length = 818
Score = 76.3 bits (186), Expect = 4e-12
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = -1
Query: 436 KEANLVDQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQW 257
K+ +L QREN+FHTRC + S+IIDGGSC N+ + +V + NLPT HP+PY LQW
Sbjct: 404 KKDDLEQQRENIFHTRCHINNKVCSMIIDGGSCTNVASTTLVENLNLPTLKHPRPYKLQW 463
Query: 256 I 254
+
Sbjct: 464 L 464
>ref|XP_006607002.1| PREDICTED: uncharacterized protein LOC100788838 [Glycine max]
Length = 519
Score = 75.9 bits (185), Expect = 5e-12
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = -1
Query: 418 DQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
+QREN+FHTRC++ S+I+DGGSC N+ + +VT NL T PHP+PY LQW+
Sbjct: 382 NQRENIFHTRCVINGKLCSLIVDGGSCTNVASSTLVTKLNLETKPHPRPYKLQWL 436
>ref|XP_006603400.1| PREDICTED: uncharacterized protein LOC102659640 [Glycine max]
Length = 594
Score = 75.9 bits (185), Expect = 5e-12
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = -1
Query: 418 DQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
+QREN+FHTRC++ S+I+DGGSC N+ + +VT NL T PHP+PY LQW+
Sbjct: 382 NQRENIFHTRCVINGKLCSLIVDGGSCTNVASSTLVTKLNLETKPHPRPYKLQWL 436
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 75.9 bits (185), Expect = 5e-12
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = -1
Query: 418 DQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
+QREN+FHTRC++ S+I+DGGSC N+ + +VT NL T PHP+PY LQW+
Sbjct: 382 NQRENIFHTRCVINGKLCSLIVDGGSCTNVASSTLVTKLNLETKPHPRPYKLQWL 436
>ref|XP_006605097.1| PREDICTED: uncharacterized protein LOC100803456 [Glycine max]
Length = 732
Score = 75.5 bits (184), Expect = 7e-12
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = -1
Query: 415 QRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
QREN+FHT CL++ S+IIDGGSC N+++ ++V NL T PHP+PY LQW+
Sbjct: 243 QRENIFHTTCLIQGRVCSLIIDGGSCTNVVSARLVKKMNLETKPHPRPYKLQWL 296
>ref|XP_006607055.1| PREDICTED: uncharacterized protein LOC100778333, partial [Glycine
max]
Length = 560
Score = 75.1 bits (183), Expect = 9e-12
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = -1
Query: 418 DQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
+QREN+FHTRC++ S+I+DGGSC N+ + +VT NL T PHP PY LQW+
Sbjct: 381 NQRENIFHTRCVINGKLCSLIVDGGSCTNVASSTLVTKLNLETKPHPTPYKLQWL 435
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = -1
Query: 415 QRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
QRENLFHTRCL+K S+IIDGGSC N+ +E +V L PHP+PY LQW+
Sbjct: 345 QRENLFHTRCLIKGKVCSLIIDGGSCTNVASETMVQKLGLEEFPHPKPYKLQWL 398
>emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera]
Length = 1124
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = -1
Query: 439 VKEANLVDQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQ 260
VKE ++ QREN+FHTRC + S+IID GSC N+ + +V NLPT HP+PY LQ
Sbjct: 331 VKEDDMEQQRENIFHTRCHINNKVCSMIIDRGSCTNVASTTLVEKLNLPTLKHPRPYKLQ 390
Query: 259 WI 254
W+
Sbjct: 391 WL 392
>gb|AAQ72729.1| putative gag-pol polyprotein [Petunia x hybrida]
Length = 803
Score = 74.7 bits (182), Expect = 1e-11
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1
Query: 415 QRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
QRENLFH RC VK S+IID GSC N++++ ++T LPT HP+PY LQW+
Sbjct: 463 QRENLFHARCRVKGVVCSMIIDSGSCTNVVSQSLITQLKLPTMKHPKPYRLQWL 516
>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 572
Score = 74.3 bits (181), Expect = 2e-11
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = -1
Query: 415 QRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
QRENLFHTRC V+ S+IIDGGSC N+ + ++V+ L T PHP+PY LQW+
Sbjct: 361 QRENLFHTRCFVQGKVCSLIIDGGSCTNVASTRLVSKLKLETKPHPKPYKLQWL 414
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/55 (56%), Positives = 40/55 (72%)
Frame = -1
Query: 418 DQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
+QREN+F+ +C + AT S IIDGGSC N+I+E VV +PT HPQPY LQW+
Sbjct: 399 EQRENIFYGKCKIPGATCSFIIDGGSCTNVISEDVVNAMKIPTIQHPQPYKLQWL 453
>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
max]
Length = 1520
Score = 73.2 bits (178), Expect = 3e-11
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = -1
Query: 415 QRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
QREN+FHTRC + T S+I+D GSCCN + ++V+ NL PHP+PY LQW+
Sbjct: 824 QRENIFHTRCKILDKTCSLIVDSGSCCNCCSTRLVSKLNLTIIPHPKPYKLQWL 877
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 72.8 bits (177), Expect = 4e-11
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = -1
Query: 439 VKEANLVDQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQ 260
+KE + QRENLFH RC V+ S+IIDGGSC N+ + ++V+ L T PHP+PY LQ
Sbjct: 354 IKEED-TSQRENLFHIRCFVQGKVCSLIIDGGSCTNVASTRLVSRLKLETKPHPKPYKLQ 412
Query: 259 WI 254
W+
Sbjct: 413 WL 414
>emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]
Length = 1115
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = -1
Query: 439 VKEANLVDQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQ 260
VKE ++ QREN FHTRC + S+IIDGGSC N+ + +V NLPT +P+PY L
Sbjct: 314 VKEDDMEQQRENXFHTRCHINNKVCSMIIDGGSCTNVASTTLVEKLNLPTLKYPRPYKLX 373
Query: 259 WI 254
W+
Sbjct: 374 WL 375
>ref|XP_006575889.1| PREDICTED: uncharacterized protein LOC102669193 [Glycine max]
Length = 488
Score = 71.2 bits (173), Expect = 1e-10
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = -1
Query: 418 DQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
+ +EN+FHTRC + S+I+DGGSC N+ + +VT NL T PHP+PY LQW+
Sbjct: 382 NHKENIFHTRCAINGKLCSLIVDGGSCTNVASSILVTKLNLETKPHPRPYKLQWL 436
>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
Length = 960
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Frame = -1
Query: 439 VKEANLVDQRENLFHTRCLVKTATLSVIIDGG-----SCCNIINEKVVTHFNLPTTPHPQ 275
VKE ++ QREN+FHTRC + S+IIDGG SC N+ + +V NLPT HP+
Sbjct: 93 VKEDDMEQQRENIFHTRCHINNKVCSMIIDGGVGEGRSCTNVASTTLVEILNLPTLKHPK 152
Query: 274 PYGLQWI 254
PY LQW+
Sbjct: 153 PYKLQWL 159
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -1
Query: 418 DQRENLFHTRCLVKTATLSVIIDGGSCCNIINEKVVTHFNLPTTPHPQPYGLQWI 254
+QRENLFH+ C+V S+IIDGGSC N+ +E +V L HP+PY LQW+
Sbjct: 728 EQRENLFHSSCMVNDKVCSLIIDGGSCTNVASETMVEKLGLKVMKHPRPYKLQWL 782