BLASTX nr result
ID: Rheum21_contig00017185
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00017185
(281 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006482016.1| PREDICTED: transcription elongation factor S... 72 6e-11
ref|XP_006430480.1| hypothetical protein CICLE_v10013566mg, part... 72 6e-11
gb|EXC30727.1| Transcription elongation factor SPT6 [Morus notab... 72 8e-11
ref|XP_002322597.2| hypothetical protein POPTR_0016s02900g [Popu... 71 1e-10
ref|XP_002307949.2| hypothetical protein POPTR_0006s03040g [Popu... 69 8e-10
gb|EOY19522.1| Global transcription factor group B1 isoform 2 [T... 67 2e-09
gb|EOY19521.1| Global transcription factor group B1 isoform 1 [T... 67 2e-09
gb|EMJ00374.1| hypothetical protein PRUPE_ppa019971mg, partial [... 67 3e-09
ref|XP_002278416.2| PREDICTED: transcription elongation factor S... 65 1e-08
emb|CBI32841.3| unnamed protein product [Vitis vinifera] 65 1e-08
gb|ESW34019.1| hypothetical protein PHAVU_001G117200g [Phaseolus... 64 3e-08
ref|XP_003521098.1| PREDICTED: transcription elongation factor S... 64 3e-08
gb|EMJ05505.1| hypothetical protein PRUPE_ppa000164mg [Prunus pe... 63 4e-08
ref|XP_006604310.1| PREDICTED: transcription elongation factor S... 59 5e-07
ref|XP_006604309.1| PREDICTED: transcription elongation factor S... 59 5e-07
ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis... 59 7e-07
ref|XP_006339249.1| PREDICTED: transcription elongation factor S... 58 1e-06
ref|XP_006339248.1| PREDICTED: transcription elongation factor S... 58 1e-06
ref|XP_003624886.1| LCR/BET1 [Medicago truncatula] gi|355499901|... 58 1e-06
ref|XP_002267338.2| PREDICTED: transcription elongation factor S... 57 3e-06
>ref|XP_006482016.1| PREDICTED: transcription elongation factor SPT6-like [Citrus
sinensis]
Length = 1623
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRR 18
+Y+TEKD+ I++ DVPER+QI ESTG P D ++I++E WIY+QL SG+ PL G+R
Sbjct: 268 KYMTEKDDQIKMTDVPERMQISEESTGSPPTDGESIVDESTWIYNQLLSGTLPLFGQR 325
>ref|XP_006430480.1| hypothetical protein CICLE_v10013566mg, partial [Citrus clementina]
gi|557532537|gb|ESR43720.1| hypothetical protein
CICLE_v10013566mg, partial [Citrus clementina]
Length = 1592
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRR 18
+Y+TEKD+ I++ DVPER+QI ESTG P D ++I++E WIY+QL SG+ PL G+R
Sbjct: 257 KYMTEKDDQIKMTDVPERMQISEESTGSPPTDGESIVDESTWIYNQLLSGTLPLFGQR 314
>gb|EXC30727.1| Transcription elongation factor SPT6 [Morus notabilis]
Length = 1638
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGR 21
+Y+TEKD+ IR D+PER+QI ESTGPP +D +I +E WIY+QL SGS PL GR
Sbjct: 265 KYMTEKDDQIRELDIPERMQISEESTGPPPLDEISIEDESNWIYNQLASGSIPLFGR 321
>ref|XP_002322597.2| hypothetical protein POPTR_0016s02900g [Populus trichocarpa]
gi|550320692|gb|EEF04358.2| hypothetical protein
POPTR_0016s02900g [Populus trichocarpa]
Length = 1692
Score = 71.2 bits (173), Expect = 1e-10
Identities = 30/57 (52%), Positives = 43/57 (75%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGR 21
+Y+TEKD+ IR+ D+PER+Q+ ESTGPP +D +ILEE W+Y Q+ SG+ PL +
Sbjct: 265 KYMTEKDDQIRMIDIPERMQVSEESTGPPPLDDFSILEESNWLYSQIASGTVPLFAK 321
>ref|XP_002307949.2| hypothetical protein POPTR_0006s03040g [Populus trichocarpa]
gi|550335341|gb|EEE91472.2| hypothetical protein
POPTR_0006s03040g [Populus trichocarpa]
Length = 1487
Score = 68.6 bits (166), Expect = 8e-10
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPL 30
+Y+TEKD+ IR+ D+PER+Q+ STGPP +D +I+EE WIY Q+ SG+ PL
Sbjct: 266 KYMTEKDDQIRMTDIPERMQVSEGSTGPPPLDDFSIMEESNWIYSQIASGTLPL 319
>gb|EOY19522.1| Global transcription factor group B1 isoform 2 [Theobroma cacao]
Length = 1382
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGR 21
+Y+TEKD+ IR+ D+PER+QI ESTG P +D +I+EE WI QL G+ PL G+
Sbjct: 88 KYMTEKDDQIRMTDIPERMQISEESTGTPPIDEMSIIEESTWILHQLIIGAVPLFGK 144
>gb|EOY19521.1| Global transcription factor group B1 isoform 1 [Theobroma cacao]
Length = 1617
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGR 21
+Y+TEKD+ IR+ D+PER+QI ESTG P +D +I+EE WI QL G+ PL G+
Sbjct: 264 KYMTEKDDQIRMTDIPERMQISEESTGTPPIDEMSIIEESTWILHQLIIGAVPLFGK 320
>gb|EMJ00374.1| hypothetical protein PRUPE_ppa019971mg, partial [Prunus persica]
Length = 1351
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/57 (54%), Positives = 42/57 (73%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGR 21
+Y+TEKD+ IR D+PER+QI ESTG P +D +I +E WIY+QL SG+ PL G+
Sbjct: 156 KYMTEKDDQIRELDIPERIQIYEESTGSPPLDEISIEDESTWIYNQLTSGTIPLYGK 212
>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis
vinifera]
Length = 1660
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLL-GRRI 15
+Y+TEKD+ +R D+PER+QIL ESTG P D +I EE WI++QL +G PLL +
Sbjct: 268 KYMTEKDDRMREIDIPERMQILEESTGSPPTDEISIEEECNWIFNQLATGMVPLLRSKGT 327
Query: 14 SEGG 3
SE G
Sbjct: 328 SEAG 331
>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
Length = 1646
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLL-GRRI 15
+Y+TEKD+ +R D+PER+QIL ESTG P D +I EE WI++QL +G PLL +
Sbjct: 269 KYMTEKDDRMREIDIPERMQILEESTGSPPTDEISIEEECNWIFNQLATGMVPLLRSKGT 328
Query: 14 SEGG 3
SE G
Sbjct: 329 SEAG 332
>gb|ESW34019.1| hypothetical protein PHAVU_001G117200g [Phaseolus vulgaris]
Length = 1679
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/60 (48%), Positives = 44/60 (73%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRRIS 12
+Y+TE+D+ IR D+PER+QI ESTG P +D +I EE +WI +QL +G+ P + ++IS
Sbjct: 270 KYMTEQDDQIRELDIPERMQISDESTGAPPLDGSSIDEESQWIVNQLGNGAVPWISKKIS 329
>ref|XP_003521098.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
Length = 1663
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRRIS 12
+Y+TEKD+ IR D+PER+Q+ ESTG P VD+ +I EE +WI QL +G+ P + ++IS
Sbjct: 270 KYMTEKDDWIRELDIPERMQVSDESTGTPPVDASSIDEESQWICKQLKNGTIPWIPKKIS 329
>gb|EMJ05505.1| hypothetical protein PRUPE_ppa000164mg [Prunus persica]
Length = 1553
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGR 21
+Y+TEKD+ IR DVPER+QI ESTG P +D ++ +E WIY+QL SG+ PL +
Sbjct: 188 KYMTEKDDQIRELDVPERMQIYEESTGSPPLDRISMDDESTWIYNQLASGTVPLFSK 244
>ref|XP_006604310.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Glycine max]
Length = 1524
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRRIS 12
+Y+TEKD+ IR D+PER+QI ESTG P +D+ +I EE +WI QL G+ + ++IS
Sbjct: 271 KYMTEKDDRIRELDIPERMQISDESTGAPPLDASSIDEESQWICKQLKDGAISWIPKKIS 330
>ref|XP_006604309.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Glycine max]
Length = 1649
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRRIS 12
+Y+TEKD+ IR D+PER+QI ESTG P +D+ +I EE +WI QL G+ + ++IS
Sbjct: 271 KYMTEKDDRIRELDIPERMQISDESTGAPPLDASSIDEESQWICKQLKDGAISWIPKKIS 330
>ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis]
gi|223536178|gb|EEF37832.1| suppressor of ty, putative
[Ricinus communis]
Length = 1650
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRR 18
+Y+TEKD IR+ D+PER+QI ESTG P D +I E WI Q SG P ++
Sbjct: 267 KYMTEKDEQIRVTDIPERMQIAEESTGSPPTDEMSITAETNWILHQFASGVVPFFRQK 324
>ref|XP_006339249.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Solanum tuberosum]
Length = 1642
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRRIS 12
+Y+TEKD IR DVPER+QI ESTGP ++ ++ EE WIY+QL +G PL ++ S
Sbjct: 281 KYMTEKDEHIRKIDVPERMQIAEESTGPVPPETISV-EESNWIYNQLAAGVVPLFKKKDS 339
>ref|XP_006339248.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Solanum tuberosum]
Length = 1643
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRRIS 12
+Y+TEKD IR DVPER+QI ESTGP ++ ++ EE WIY+QL +G PL ++ S
Sbjct: 282 KYMTEKDEHIRKIDVPERMQIAEESTGPVPPETISV-EESNWIYNQLAAGVVPLFKKKDS 340
>ref|XP_003624886.1| LCR/BET1 [Medicago truncatula] gi|355499901|gb|AES81104.1| LCR/BET1
[Medicago truncatula]
Length = 1753
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRRIS 12
+Y+TEKD++IR D+PER+QI ESTG P D +I EE +WI QL G+ P + ++ S
Sbjct: 386 KYMTEKDDMIRELDIPERMQISEESTGAP--DGSSINEETQWIVKQLKHGAVPWIRKKDS 443
>ref|XP_002267338.2| PREDICTED: transcription elongation factor SPT6-like [Vitis
vinifera]
Length = 1891
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = -1
Query: 191 QYITEKDNVIRLNDVPERLQILAESTGPPSVDSDAILEEVKWIYDQLDSGSAPLLGRRIS 12
+Y+TEKD++IR D+PER+QI ESTGP VD +I EE WI QL + ++
Sbjct: 348 KYLTEKDDLIRNIDMPERIQISEESTGPAPVDIMSIKEETSWILSQLTTKITWFCKMKVI 407
Query: 11 EG 6
EG
Sbjct: 408 EG 409