BLASTX nr result
ID: Rheum21_contig00017080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00017080
(359 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242... 117 1e-24
emb|CBI29623.3| unnamed protein product [Vitis vinifera] 117 1e-24
ref|XP_004231317.1| PREDICTED: uncharacterized protein LOC101254... 114 1e-23
ref|XP_006470807.1| PREDICTED: protein STICHEL-like [Citrus sine... 113 3e-23
ref|XP_006431389.1| hypothetical protein CICLE_v10000047mg [Citr... 113 3e-23
ref|XP_006358471.1| PREDICTED: protein STICHEL-like [Solanum tub... 112 4e-23
gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum] 110 1e-22
gb|EOY26408.1| AAA-type ATPase family protein, putative isoform ... 109 3e-22
emb|CAN80767.1| hypothetical protein VITISV_013864 [Vitis vinifera] 107 1e-21
gb|EOY26406.1| AAA-type ATPase family protein, putative isoform ... 107 2e-21
ref|XP_003528725.2| PREDICTED: protein STICHEL-like [Glycine max] 105 6e-21
ref|XP_004301580.1| PREDICTED: uncharacterized protein LOC101313... 104 1e-20
ref|XP_002519367.1| replication factor C / DNA polymerase III ga... 104 1e-20
gb|ESW26099.1| hypothetical protein PHAVU_003G090800g [Phaseolus... 103 2e-20
ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212... 100 3e-19
ref|XP_002303217.1| STICHEL family protein [Populus trichocarpa]... 100 3e-19
gb|EMJ26643.1| hypothetical protein PRUPE_ppa000379mg [Prunus pe... 98 1e-18
ref|NP_565285.1| protein STICHEL [Arabidopsis thaliana] gi|75318... 98 1e-18
ref|XP_003550458.1| PREDICTED: protein STICHEL-like [Glycine max] 96 5e-18
ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|5... 96 5e-18
>ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242129 [Vitis vinifera]
Length = 1274
Score = 117 bits (294), Expect = 1e-24
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGP 176
+W+DELN EIK LKIND++ ++KD G R +H PISPS LH SS + +K+ GYESG
Sbjct: 1159 KWEDELNHEIKVLKINDRRALQKDPVGKRVDHYPISPSSLHDSSFVANFNKESMGYESGT 1218
Query: 175 GGKGCNILFCWNT-RHPRRAKVKQGTPVQQRK--GESFLCFGECRKSR 41
G GCN FCWN + P+R K+KQ P+ K F CFGEC KSR
Sbjct: 1219 GSVGCNSFFCWNNDKPPKRGKIKQRPPLPSPKVGRGRFPCFGECGKSR 1266
>emb|CBI29623.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 117 bits (294), Expect = 1e-24
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGP 176
+W+DELN EIK LKIND++ ++KD G R +H PISPS LH SS + +K+ GYESG
Sbjct: 963 KWEDELNHEIKVLKINDRRALQKDPVGKRVDHYPISPSSLHDSSFVANFNKESMGYESGT 1022
Query: 175 GGKGCNILFCWNT-RHPRRAKVKQGTPVQQRK--GESFLCFGECRKSR 41
G GCN FCWN + P+R K+KQ P+ K F CFGEC KSR
Sbjct: 1023 GSVGCNSFFCWNNDKPPKRGKIKQRPPLPSPKVGRGRFPCFGECGKSR 1070
>ref|XP_004231317.1| PREDICTED: uncharacterized protein LOC101254741 [Solanum
lycopersicum]
Length = 1233
Score = 114 bits (286), Expect = 1e-23
Identities = 58/105 (55%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Frame = -2
Query: 352 WDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGPG 173
W D+LN EI++LK+ D K V+KDQ + + PISPSLLH G + SK+ GYESG G
Sbjct: 1124 WHDDLNEEIRSLKMIDGKAVQKDQTSKKGDSYPISPSLLHNGIYGSNFSKESMGYESGSG 1183
Query: 172 GKGCNILFCWNTRHP-RRAKVKQGTPVQQRKGESFLCFGECRKSR 41
GC FCWN P RR KVKQGTPV+ KG FL FGEC K R
Sbjct: 1184 AGGC---FCWNNSRPQRRGKVKQGTPVRPPKGGRFLWFGECAKPR 1225
>ref|XP_006470807.1| PREDICTED: protein STICHEL-like [Citrus sinensis]
Length = 1268
Score = 113 bits (282), Expect = 3e-23
Identities = 51/105 (48%), Positives = 72/105 (68%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGP 176
+W+DELN E+K LK+N+ + ++KD+ G + E+ PI PSLLH SS G+ SK++QGYESG
Sbjct: 1156 QWEDELNQELKILKLNEDRVLKKDENGKKGENYPILPSLLHDSSFMGNFSKENQGYESGS 1215
Query: 175 GGKGCNILFCWNTRHPRRAKVKQGTPVQQRKGESFLCFGECRKSR 41
GC+ LFCWN P + +GTPV+ RKG F F +C K++
Sbjct: 1216 QAGGCSGLFCWNNTKPHKKGKVKGTPVRSRKGGHFSLFVDCTKAK 1260
>ref|XP_006431389.1| hypothetical protein CICLE_v10000047mg [Citrus clementina]
gi|557533511|gb|ESR44629.1| hypothetical protein
CICLE_v10000047mg [Citrus clementina]
Length = 1268
Score = 113 bits (282), Expect = 3e-23
Identities = 51/105 (48%), Positives = 72/105 (68%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGP 176
+W+DELN E+K LK+N+ + ++KD+ G + E+ PI PSLLH SS G+ SK++QGYESG
Sbjct: 1156 QWEDELNQELKILKLNEDRVLKKDENGKKGENYPILPSLLHDSSFMGNFSKENQGYESGS 1215
Query: 175 GGKGCNILFCWNTRHPRRAKVKQGTPVQQRKGESFLCFGECRKSR 41
GC+ LFCWN P + +GTPV+ RKG F F +C K++
Sbjct: 1216 QAGGCSGLFCWNNTKPHKKGKVKGTPVRSRKGGHFSLFVDCTKAK 1260
>ref|XP_006358471.1| PREDICTED: protein STICHEL-like [Solanum tuberosum]
Length = 1271
Score = 112 bits (281), Expect = 4e-23
Identities = 58/105 (55%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Frame = -2
Query: 352 WDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGPG 173
W D+LN EI++LK+ D K V+KDQ + + PISPSLLH + SK+ GYESG G
Sbjct: 1162 WHDDLNEEIRSLKMIDGKAVQKDQTSKKGDSYPISPSLLHNGIYASNFSKESMGYESGSG 1221
Query: 172 GKGCNILFCW-NTRHPRRAKVKQGTPVQQRKGESFLCFGECRKSR 41
GC FCW NTR RR KVKQGTPV+ KG FL FGEC K R
Sbjct: 1222 AGGC---FCWNNTRPQRRGKVKQGTPVRPPKGGRFLWFGECAKPR 1263
>gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]
Length = 1223
Score = 110 bits (276), Expect = 1e-22
Identities = 60/108 (55%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGP 176
+WD+ELN E+K LK ND + ++KDQ G RA+H P+SPSLLH S +LSK++ GYESG
Sbjct: 1113 QWDEELNRELKILKTNDGQEIQKDQLGRRADHYPMSPSLLHNS----TLSKEN-GYESGS 1167
Query: 175 GGKGCNILFCWNTRHP-RRAKVKQ--GTPVQQRKGESFLCFGECRKSR 41
G GC+ LFCWN P RRAKV Q GTPV+ + F FGEC KS+
Sbjct: 1168 GTGGCSGLFCWNNSKPRRRAKVGQVKGTPVRSCRTRRFSLFGECGKSK 1215
>gb|EOY26408.1| AAA-type ATPase family protein, putative isoform 3 [Theobroma cacao]
Length = 1333
Score = 109 bits (273), Expect = 3e-22
Identities = 57/108 (52%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKK--TVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYES 182
+W+DELN E+K LK ND + ++KDQ R + P+SPSLLH SS LSK++ GY+S
Sbjct: 1216 QWEDELNHELKILKTNDGQGQAIQKDQMARRGDQYPMSPSLLHNSS----LSKENLGYDS 1271
Query: 181 GPGGKGCNILFCWNTRHP-RRAKVKQGTPVQQRKGESFLCFGECRKSR 41
G G GC+ LFCWN P RRAKV +GTPV+ R+ F FGEC KS+
Sbjct: 1272 GSGNGGCSGLFCWNNTKPHRRAKVVKGTPVRARRSGRFSLFGECGKSK 1319
>emb|CAN80767.1| hypothetical protein VITISV_013864 [Vitis vinifera]
Length = 545
Score = 107 bits (268), Expect = 1e-21
Identities = 52/102 (50%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGP 176
+W+DELN EIK LKIND++ ++KD G R +H PISPS LH SS + +K+ GYESG
Sbjct: 399 KWEDELNHEIKVLKINDRRALQKDPVGKRVDHYPISPSSLHDSSFVANFNKESMGYESGT 458
Query: 175 GGKGCNILFCWNT-RHPRRAKVKQGTPVQQRK--GESFLCFG 59
G GCN FCWN + P+R K+KQ P+ K F CFG
Sbjct: 459 GSVGCNSFFCWNNDKPPKRGKIKQRPPLPSPKVGRGRFPCFG 500
>gb|EOY26406.1| AAA-type ATPase family protein, putative isoform 1 [Theobroma cacao]
Length = 1332
Score = 107 bits (267), Expect = 2e-21
Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKK--TVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYES 182
+W+DELN E+K LK ND + ++KDQ R + P+SPSLLH SS LSK++ GY+S
Sbjct: 1216 QWEDELNHELKILKTNDGQGQAIQKDQMARRGDQYPMSPSLLHNSS----LSKENLGYDS 1271
Query: 181 GPGGKGCNILFCWNTRHP-RRAKVKQGTPVQQRKGESFLCFGECRKSR 41
G G GC+ LFCWN P RRAKVK GTPV+ R+ F FGEC KS+
Sbjct: 1272 GSGNGGCSGLFCWNNTKPHRRAKVK-GTPVRARRSGRFSLFGECGKSK 1318
>ref|XP_003528725.2| PREDICTED: protein STICHEL-like [Glycine max]
Length = 1240
Score = 105 bits (262), Expect = 6e-21
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Frame = -2
Query: 352 WDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGPG 173
W+DELN E+K L + + + +KDQ G +A+ P+SPSLLH +S KD+ GYESG G
Sbjct: 1131 WEDELNNEVKVLSLKNGRVPQKDQIGRKADRYPMSPSLLHDNSLATISGKDNLGYESGSG 1190
Query: 172 GKGCNILFCWNTRHPRR-AKVKQGTPVQQRKGESFLCFGECRKSR 41
GC L CWN PRR KVK GTPV+ R+ +F FG+C K +
Sbjct: 1191 AGGCGFL-CWNKSKPRRVVKVKGGTPVRARRAATFTLFGDCTKPK 1234
>ref|XP_004301580.1| PREDICTED: uncharacterized protein LOC101313812 [Fragaria vesca
subsp. vesca]
Length = 1217
Score = 104 bits (260), Expect = 1e-20
Identities = 56/106 (52%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGP 176
+WDD LN E+K L+ N K V++DQ G R +H P+SPSLLH+ G KD+ G ESG
Sbjct: 1109 QWDDGLNHEVKILRANSGKVVQQDQIGKRVDHYPMSPSLLHEK---GKSDKDNLGDESGS 1165
Query: 175 GGKGCNILF-CWNTRHPRRAKVKQGTPVQQRKGESFLCFGECRKSR 41
G GC+ F C++TR +R KVK GTPVQ RKG F FG C KSR
Sbjct: 1166 GRGGCSGFFRCYDTRRRKRGKVK-GTPVQPRKGRQFSLFGVCGKSR 1210
>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223541434|gb|EEF42984.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 1270
Score = 104 bits (259), Expect = 1e-20
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Frame = -2
Query: 352 WDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGPG 173
W+ ELN E+K LK+ +++ + KDQ G RA+H PISPSLLH S+ G+L+K+ GYES
Sbjct: 1161 WEHELNDELKVLKMEERRVLHKDQIGKRADHYPISPSLLHGSNFVGNLNKESLGYESSSA 1220
Query: 172 GKGCNILFCWNTRHPRRAKVKQGTPVQQR-KGESFLCFGECRKSR 41
G GC+ LFCWN + GTPV+ R KG F FGEC K +
Sbjct: 1221 GGGCSGLFCWNANKSHKV---NGTPVRYRGKGGRFSLFGECGKHK 1262
>gb|ESW26099.1| hypothetical protein PHAVU_003G090800g [Phaseolus vulgaris]
Length = 1252
Score = 103 bits (257), Expect = 2e-20
Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Frame = -2
Query: 352 WDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGPG 173
W+D+ N E+K L + + + +KDQ G +A+ P+SPSLLH +S K+H GYESG G
Sbjct: 1143 WEDDPNNELKVLTLKNGRVPQKDQTGRKADRFPMSPSLLHDNSLATIPGKEHPGYESGSG 1202
Query: 172 GKGCNILFCWNTRHPRRA-KVKQGTPVQQRKGESFLCFGECRKSR 41
GC L CWN PRR KVK GTPV+ R+G F FG+C K +
Sbjct: 1203 AGGCGFL-CWNKSKPRRVIKVKGGTPVRARRGAGFTVFGDCGKPK 1246
>ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212356 [Cucumis sativus]
gi|449478091|ref|XP_004155220.1| PREDICTED:
uncharacterized protein LOC101227259 [Cucumis sativus]
Length = 1267
Score = 100 bits (248), Expect = 3e-19
Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGP 176
+W+DELN E+K LK+ D +K+Q G RA+ ISPS+LH S G+ +KD+ GYES
Sbjct: 1153 KWEDELNRELKVLKVGDDILAQKEQVGRRADRYAISPSILHDGSMVGNSNKDNLGYESSS 1212
Query: 175 GGKGCNILFCWNTRHP-RRAKVKQGTPVQQRKGESFLCFGECRKSR 41
GC+ LFCWN+ P +RAKV+ V+ R G F FGEC KSR
Sbjct: 1213 AAGGCSGLFCWNSSKPHKRAKVR-ANHVRSRNGR-FSLFGECGKSR 1256
>ref|XP_002303217.1| STICHEL family protein [Populus trichocarpa]
gi|222840649|gb|EEE78196.1| STICHEL family protein
[Populus trichocarpa]
Length = 1241
Score = 100 bits (248), Expect = 3e-19
Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGP 176
+W+DELN E+K LK+ D++ + KDQ G ++ P+SPSLLH SS + SK+ GYES
Sbjct: 1129 KWEDELNHELKVLKMQDQRVLRKDQIGKMVDYYPMSPSLLHGSSYVANGSKESLGYESSS 1188
Query: 175 GGKGCNILFCWNTRHPRRAKVKQGTPVQQR-KGESFLCFGECRKSR 41
G GC+ LFCWN RAK K TPV R + F FGEC K +
Sbjct: 1189 AGGGCSGLFCWNNSRSNRAKAK-ATPVGPRGRSGRFSLFGECAKQK 1233
>gb|EMJ26643.1| hypothetical protein PRUPE_ppa000379mg [Prunus persica]
Length = 1227
Score = 98.2 bits (243), Expect = 1e-18
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGP 176
+W+D LN E+K LK+N + +KDQ G + +H P+SPSLLH S+ G+ +KD+ G ESG
Sbjct: 1112 QWEDGLNHEVKILKVNSGRDAQKDQTGRKVDHYPMSPSLLHDSNFVGNSNKDNLGDESGS 1171
Query: 175 GGKGCNILF-CWNTRHPRRAKVK-QGTPVQQRKGESFLCFGEC-RKSR 41
G GC+ F C+NT+ +R KVK VQ RKG FGEC +KSR
Sbjct: 1172 GKGGCSGFFHCYNTKPRKRGKVKGTAVAVQPRKGRRLSLFGECGKKSR 1219
>ref|NP_565285.1| protein STICHEL [Arabidopsis thaliana]
gi|75318489|sp|O64728.2|STI_ARATH RecName: Full=Protein
STICHEL gi|8980710|gb|AAF82285.1|AF264023_1 STICHEL
[Arabidopsis thaliana] gi|20197093|gb|AAC18938.2| similar
to prokaryotic DNA polymerase III gamma subunit
[Arabidopsis thaliana] gi|330250491|gb|AEC05585.1|
protein STICHEL [Arabidopsis thaliana]
Length = 1218
Score = 97.8 bits (242), Expect = 1e-18
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Frame = -2
Query: 355 RWDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDH-QGYESG 179
+W DELN E+K LKI D ++++ G R +H P+SPSLLH ++ G +KD+ GYESG
Sbjct: 1102 QWVDELNNEVKLLKIGDNGELQENLTGTRGQHCPLSPSLLHDTNFGN--NKDNLGGYESG 1159
Query: 178 PGGKGCNILFCWNTRH-PRRAKVKQ--GTPVQQRKGES--FLCFGECRKSR 41
G GCNILFCWNT+ RR+K KQ GTPV+ R+ F F C K R
Sbjct: 1160 SGRVGCNILFCWNTKKTQRRSKSKQVKGTPVRSRRNRKSRFSLFNGCAKPR 1210
>ref|XP_003550458.1| PREDICTED: protein STICHEL-like [Glycine max]
Length = 1236
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/103 (45%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = -2
Query: 352 WDDELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGPG 173
W+D+ N E+K L + + + +KDQ G + + P+SPSLLH +S KD+ GYESG G
Sbjct: 1127 WEDDPNDEVKVLSLKNGRIPQKDQIGRKTDRFPMSPSLLHDNSLATISGKDNLGYESGSG 1186
Query: 172 GKGCNILFCWNTRHPRRA-KVKQGTPVQQRKGESFLCFGECRK 47
GC L CWN PRR KVK GTPV+ + +F FG+C K
Sbjct: 1187 AGGCGFL-CWNKSKPRRVIKVKGGTPVRAGRAATFTLFGDCTK 1228
>ref|XP_002328811.1| predicted protein [Populus trichocarpa]
gi|566168353|ref|XP_006385102.1| STICHEL family protein
[Populus trichocarpa] gi|550341870|gb|ERP62899.1| STICHEL
family protein [Populus trichocarpa]
Length = 1197
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/103 (50%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Frame = -2
Query: 346 DELNLEIKALKINDKKTVEKDQAGMRAEHPPISPSLLHQSSCGGSLSKDHQGYESGPGGK 167
+ELN E+K LK+ +++ KDQ G +H PISPSLLH SS + SK+ GYES G
Sbjct: 1088 NELNHELKVLKMQNRRVHHKDQIGHMVDHYPISPSLLHGSSYVVNGSKESLGYESSSAGG 1147
Query: 166 GCNILFCWNTRHPRRAKVKQGTPVQQR-KGESFLCFGECRKSR 41
GC+ L CWNT RAKVK+ TPVQ R + F FGEC K +
Sbjct: 1148 GCSGLLCWNTSRSHRAKVKE-TPVQPRGRSGRFSLFGECAKQK 1189