BLASTX nr result
ID: Rheum21_contig00016966
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00016966
(681 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY07471.1| Zinc finger family protein, putative [Theobroma c... 86 1e-14
ref|XP_002531557.1| zinc finger protein, putative [Ricinus commu... 78 2e-12
emb|CBI16098.3| unnamed protein product [Vitis vinifera] 75 2e-11
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 75 2e-11
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera] 75 2e-11
ref|XP_004302753.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 74 3e-11
emb|CBI31649.3| unnamed protein product [Vitis vinifera] 74 3e-11
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 74 3e-11
emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera] 74 3e-11
gb|ESW35419.1| hypothetical protein PHAVU_001G233700g [Phaseolus... 74 4e-11
gb|EPS71485.1| hypothetical protein M569_03274 [Genlisea aurea] 74 4e-11
gb|EPS68566.1| hypothetical protein M569_06199, partial [Genlise... 73 9e-11
ref|XP_006654903.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 72 1e-10
gb|EMJ06694.1| hypothetical protein PRUPE_ppa008198mg [Prunus pe... 72 1e-10
gb|EEE62065.1| hypothetical protein OsJ_16849 [Oryza sativa Japo... 72 1e-10
gb|EAY96258.1| hypothetical protein OsI_18156 [Oryza sativa Indi... 72 1e-10
ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group] g... 72 1e-10
gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza... 72 1e-10
gb|AGB52033.1| ring H2 finger protein, partial [Elaeis guineensis] 72 2e-10
gb|EMT23201.1| hypothetical protein F775_02809 [Aegilops tauschii] 72 2e-10
>gb|EOY07471.1| Zinc finger family protein, putative [Theobroma cacao]
Length = 369
Score = 85.5 bits (210), Expect = 1e-14
Identities = 50/106 (47%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRGLXXX 502
GFAVGRF+GGRR AE E PVV+TEMDG FN+ +GAPRRI+W S RS + RGL
Sbjct: 266 GFAVGRFTGGRRAAEREFPVVFTEMDGGFNN----AGAPRRISWAPSGRRSQESRGLGRV 321
Query: 501 XXXXXXXXXXXXXXXXXXXSELRVTGRSRSNSIFRR--RQREEWTF 370
S+ R T RSRS+S+F R R+ +W F
Sbjct: 322 FRSFVSFFGRFRSSSSRSGSDSRFTRRSRSSSVFDRSSRRDSDWDF 367
>ref|XP_002531557.1| zinc finger protein, putative [Ricinus communis]
gi|223528818|gb|EEF30823.1| zinc finger protein,
putative [Ricinus communis]
Length = 356
Score = 78.2 bits (191), Expect = 2e-12
Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 5/61 (8%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNF-----NDNSNRSGAPRRITWGSSVNRSGQGR 517
GFAVGRFSGGRR AE ELPVV+TE+DG F N+N+N GAPRRI+W S RS +G
Sbjct: 241 GFAVGRFSGGRRAAERELPVVFTEVDGGFNNSNSNNNNNAGGAPRRISWAPSGRRSREGT 300
Query: 516 G 514
G
Sbjct: 301 G 301
>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 74.7 bits (182), Expect = 2e-11
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRG 514
GFAVGRFSGGRR E ELPVVYTEMDG FN+ SGAPRRI+W S +RS + G
Sbjct: 372 GFAVGRFSGGRRAGERELPVVYTEMDGGFNN----SGAPRRISWASRRSRSRESGG 423
>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 388
Score = 74.7 bits (182), Expect = 2e-11
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRG 514
GFAVGRFSGGRR E ELPVVYTEMDG FN+ SGAPRRI+W S +RS + G
Sbjct: 271 GFAVGRFSGGRRAGERELPVVYTEMDGGFNN----SGAPRRISWASRRSRSRESGG 322
>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
Length = 1218
Score = 74.7 bits (182), Expect = 2e-11
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRG 514
GFAVGRFSGGRR E ELPVVYTEMDG FN+ SGAPRRI+W S +RS + G
Sbjct: 381 GFAVGRFSGGRRAGERELPVVYTEMDGGFNN----SGAPRRISWASRRSRSRESGG 432
>ref|XP_004302753.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Fragaria vesca
subsp. vesca]
Length = 373
Score = 74.3 bits (181), Expect = 3e-11
Identities = 49/108 (45%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRGL-XX 505
GFAVGRF+GGRR AE ELPVVYTEMDG FN GAPRRI+W SS R+ + G
Sbjct: 264 GFAVGRFTGGRRAAERELPVVYTEMDGGFN---TAGGAPRRISWPSSGRRTRESGGFARA 320
Query: 504 XXXXXXXXXXXXXXXXXXXXSELRVTGRSRSNSIF---RRRQREEWTF 370
SE + RSRS S+F RR+ + W F
Sbjct: 321 FRNFFSFFGRLRSSSSSRSSSESGLGRRSRSISVFSRASRRRNQGWAF 368
>emb|CBI31649.3| unnamed protein product [Vitis vinifera]
Length = 761
Score = 74.3 bits (181), Expect = 3e-11
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRGL 511
GFAVGRFSGGRR E ELPVVYTEMDG FN+ GAPRRI+W S NR+ + GL
Sbjct: 235 GFAVGRFSGGRRGGERELPVVYTEMDGGFNN----GGAPRRISWTSRTNRNQERGGL 287
>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 361
Score = 74.3 bits (181), Expect = 3e-11
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRGL 511
GFAVGRFSGGRR E ELPVVYTEMDG FN+ GAPRRI+W S NR+ + GL
Sbjct: 250 GFAVGRFSGGRRGGERELPVVYTEMDGGFNN----GGAPRRISWTSRTNRNQERGGL 302
>emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera]
Length = 365
Score = 74.3 bits (181), Expect = 3e-11
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRGL 511
GFAVGRFSGGRR E ELPVVYTEMDG FN+ GAPRRI+W S NR+ + GL
Sbjct: 254 GFAVGRFSGGRRGGERELPVVYTEMDGGFNN----GGAPRRISWTSRTNRNQERGGL 306
>gb|ESW35419.1| hypothetical protein PHAVU_001G233700g [Phaseolus vulgaris]
Length = 386
Score = 73.9 bits (180), Expect = 4e-11
Identities = 38/57 (66%), Positives = 41/57 (71%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRGL 511
GFAVGRFSGGRR AE ELPVVYTEMDG FN+ G PRRI+W S NR + GL
Sbjct: 271 GFAVGRFSGGRRGAERELPVVYTEMDGGFNN----GGEPRRISWSSRGNRGRESGGL 323
>gb|EPS71485.1| hypothetical protein M569_03274 [Genlisea aurea]
Length = 420
Score = 73.9 bits (180), Expect = 4e-11
Identities = 40/56 (71%), Positives = 41/56 (73%), Gaps = 4/56 (7%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGS----SVNRSG 526
GFAVGRFSGGRR E ELPVVYTEMDG FN N G PRRI+WGS S NRSG
Sbjct: 276 GFAVGRFSGGRRGGERELPVVYTEMDGGFNSN----GVPRRISWGSGGSVSRNRSG 327
>gb|EPS68566.1| hypothetical protein M569_06199, partial [Genlisea aurea]
Length = 385
Score = 72.8 bits (177), Expect = 9e-11
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRGL 511
GFAVGRFSGGRR E ELPVVYTEMDG FN+N G PRRI+WGS + + G+
Sbjct: 287 GFAVGRFSGGRRSGERELPVVYTEMDGGFNNN----GVPRRISWGSGGSATRDRSGI 339
>ref|XP_006654903.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like, partial [Oryza
brachyantha]
Length = 260
Score = 72.4 bits (176), Expect = 1e-10
Identities = 36/51 (70%), Positives = 40/51 (78%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRS 529
GFAVGRF+GGRR E ELPVVYTEMDG FN+ GAPRRI+WGS +RS
Sbjct: 144 GFAVGRFAGGRRPEERELPVVYTEMDGGFNN----GGAPRRISWGSRQSRS 190
>gb|EMJ06694.1| hypothetical protein PRUPE_ppa008198mg [Prunus persica]
Length = 341
Score = 72.4 bits (176), Expect = 1e-10
Identities = 38/57 (66%), Positives = 42/57 (73%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRGL 511
GFAVGRFSGGRR E ELPVVYTEMDG FN N GAPRR+ W SS +R + RG+
Sbjct: 233 GFAVGRFSGGRRPGERELPVVYTEMDGPFNGN----GAPRRVLW-SSRSRGSESRGI 284
>gb|EEE62065.1| hypothetical protein OsJ_16849 [Oryza sativa Japonica Group]
Length = 243
Score = 72.4 bits (176), Expect = 1e-10
Identities = 36/51 (70%), Positives = 40/51 (78%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRS 529
GFAVGRF+GGRR E ELPVVYTEMDG FN+ GAPRRI+WGS +RS
Sbjct: 127 GFAVGRFAGGRRPEERELPVVYTEMDGGFNN----GGAPRRISWGSRQSRS 173
>gb|EAY96258.1| hypothetical protein OsI_18156 [Oryza sativa Indica Group]
Length = 147
Score = 72.4 bits (176), Expect = 1e-10
Identities = 36/51 (70%), Positives = 40/51 (78%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRS 529
GFAVGRF+GGRR E ELPVVYTEMDG FN+ GAPRRI+WGS +RS
Sbjct: 31 GFAVGRFAGGRRPEERELPVVYTEMDGGFNN----GGAPRRISWGSRQSRS 77
>ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group]
gi|52353630|gb|AAU44196.1| putative ring-H2 finger
protein [Oryza sativa Japonica Group]
gi|255675945|dbj|BAF16351.2| Os05g0110000 [Oryza sativa
Japonica Group]
Length = 333
Score = 72.4 bits (176), Expect = 1e-10
Identities = 36/51 (70%), Positives = 40/51 (78%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRS 529
GFAVGRF+GGRR E ELPVVYTEMDG FN+ GAPRRI+WGS +RS
Sbjct: 217 GFAVGRFAGGRRPEERELPVVYTEMDGGFNN----GGAPRRISWGSRQSRS 263
>gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza sativa]
Length = 386
Score = 72.4 bits (176), Expect = 1e-10
Identities = 36/51 (70%), Positives = 40/51 (78%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRS 529
GFAVGRF+GGRR E ELPVVYTEMDG FN+ GAPRRI+WGS +RS
Sbjct: 270 GFAVGRFAGGRRPEERELPVVYTEMDGGFNN----GGAPRRISWGSRQSRS 316
>gb|AGB52033.1| ring H2 finger protein, partial [Elaeis guineensis]
Length = 207
Score = 72.0 bits (175), Expect = 2e-10
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRSGQGRGL 511
GFA+GRFSGGRR E ELPVVYTEMDG F GAPRRI+W S + SG+ RG+
Sbjct: 73 GFAIGRFSGGRRAGERELPVVYTEMDGGF----TIGGAPRRISWASRGSPSGERRGI 125
>gb|EMT23201.1| hypothetical protein F775_02809 [Aegilops tauschii]
Length = 152
Score = 72.0 bits (175), Expect = 2e-10
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = -1
Query: 681 GFAVGRFSGGRRMAEGELPVVYTEMDGNFNDNSNRSGAPRRITWGSSVNRS 529
GFAVGRF+GGRR E ELPVVYTEMDG F N GAPRRI+WGS +RS
Sbjct: 34 GFAVGRFAGGRRPEERELPVVYTEMDGGF----NHGGAPRRISWGSRQSRS 80